Clinocottus analis (woolly sculpin): 137794587
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Entry
137794587 CDS
T10471
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137794587 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cana03310
]
137794587 (rorca)
Transcription factors [BR:
cana03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
137794587 (rorca)
Nuclear receptors [BR:
cana03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
137794587 (rorca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Cor1
Motif
Other DBs
NCBI-GeneID:
137794587
NCBI-ProteinID:
XP_068447566
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All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQAQECTGLGVRERENVVMA
DHGRTYRRSSTAALSDLDDISMLPEGLLFDLPLTPEDACGDYCNLDMLGGSAGSTSSSQS
SPEQTNLDFLDSNHSIKHEYQLLHDSGLFSHAIFNPLPEGCSLLEIERITQSVLKSHIET
SQYSTEELKRMAWTLYSPEETRSFQTKSAEVMWQQCAIQITNAIQYVVEFAKRISGFMDL
CQNDQIILLKAGCMDVLLIRMCRAYNPINNTMLFDGKFTAAHLFEALGCDDLVNSVFDLA
KSLSRVQMSEEEMALFTAAVLLSPDRPWLTDVQKIQKLQEKVYVALQRSLQREGASEEKL
AKMVSKLPTIKSICNLHIDKLEFFRLIHPEIAYTFPPLYREVFCSEIAFPDSTEG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaggtgattccgtgtaaaatctgtggagacaaatcatcagggatt
cactatggtgtcatcacctgtgaaggctgcaagggtttcttccgacgcagccagcagaac
aatgctatgtattcctgctcccgacagaggaactgtttaattgaccggaccaaccgcaac
cgttgtcagcactgcaggctgcagaagtgtctcgctctgggcatgagccgcgatgccgtc
aagtttggccgaatgtccaaaaagcagcgcgacagcctgtacgcagaggtccagaagcac
cagcaggcccaggagtgcacggggctcggcgttcgcgagcgagagaacgtcgtcatggcc
gaccacggccgcacctacagaagaagctccaccgccgcgctcagcgacctggacgacatt
agcatgctgccagaaggcctgcttttcgacctgccgctcacccccgaggacgcatgtgga
gactactgcaacctggacatgctgggcggcagtgcaggcagcacgtcctcctctcagagt
tcaccagaacagaccaacttggactttctagacagcaaccacagcatcaagcatgagtac
cagctgttgcacgactctggactcttctcacacgcgatcttcaacccgctgcccgagggc
tgctccctgcttgagattgagcgtataactcagagtgtgctgaagtcccatattgagacg
agccagtacagcacagaggagctgaagagaatggcgtggaccttgtatagcccagaagag
acacgctcattccagaccaagtcagctgaggtgatgtggcaacaatgtgccattcaaatc
accaatgcaatccagtacgtggtagagtttgccaagcgcatctctggcttcatggacctc
tgtcagaacgatcagatcatcctcctcaaagcaggctgcatggatgttcttctgatccgg
atgtgtcgggcctataaccccatcaacaatacgatgctatttgatggaaagtttacagct
gctcatcttttcgaagcacttggttgtgacgacctggtgaattctgtcttcgacttggct
aaaagcctgagccgtgtacaaatgtccgaggaagaaatggctctcttcactgctgctgtg
ctgctctcaccagaccgaccctggctgacagatgttcagaagatacagaagttgcaagag
aaggtctatgtggctctgcagcgcagcctacaaagagaaggagcatcagaagagaaacta
gctaagatggtgtcaaagcttcccaccataaagtccatttgcaaccttcacatcgacaaa
ctggagtttttccgcctgatccaccctgagattgcgtacaccttcccgcctctgtatcgg
gaggttttttgcagtgaaatcgccttccccgactccacagaaggctag
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