Clinocottus analis (woolly sculpin): 137794630
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Entry
137794630 CDS
T10471
Symbol
frem1b
Name
(RefSeq) FRAS1-related extracellular matrix protein 1b isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04512
ECM-receptor interaction
Brite
Lectins [BR:
cana04091
]
C-Type lectins
Lecticans
137794630 (frem1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137794630
NCBI-ProteinID:
XP_068447642
LinkDB
All DBs
Position
Unknown
AA seq
2144 aa
AA seq
DB search
MAAVSNALLGWLLLLLVATMSVCSSNLVAVNSGVEVARGRSVFITERELKISVGPTADCK
VEVVMNEPITQRVGRLTPQVFDCSFLQDEVKYVHDGSPMLDQDAVMLRVYRFTASDTLVE
MVVLPVRVVDSGSSVVELGSTPLVVPLFYGLSNTIDGSVLNIRTTADLVCIVRLVTTDTS
VPALGQLVREEDSTQRKGRETAVLCPGNKPCRRDTKEVRFLKTNCQDFLNSGLKYQHLRS
SSPEIDYIPIRVELREQGTRALLEAESVWLPVLIHGAMQNQPPQAAFMASFILEVDQFIL
TPLTTASLDAKDHETPQERLVFNVTALPAEGYITHLNDHTKPVTSFTWLDLHEMKVAYQP
PNSSQSHRRNYEAEFQAIDSSYMTSPPIVVHISIRATETNAPRVSWNRGLDLLEGQSRPI
TWEELQIVDNDNIDAVYLVAVDGPLCGRLSVRGGKAFMFRVRDLQEGEVVYHHSDSDTTR
DHVVFRISDGRHTIRHRFPINVLPKDDSPPFLINNMAVEVREGGAVRLEEFMLLASDLDS
SDDYILYRVASGPMAGQLVRKTSPHETGDPVDSFLQRDLIKGQIYYQHSGEEQFEDFFDF
KLSDSHQPPNLSQTYTVVIHVFPVKDQLPAEVSGSVRSLTVKETEVVYITQAHLHFTDRE
HPDTDLTYVITQPCFSPLLPGLMDAGRLFYTDTANSMKRDHMVPVLKSFTQHAVRHMKVA
FMPPVEDIGLEPLFSQFVFSVSDHHGGTVSGLLFNITVTPVDDQAPEAFTNLLRVEEGGG
AFVREEHLLVQDRDSREESLRAEVWRMAQHGRLELQGQALQQRDGFTLQDLRGLRLRYIH
DDSETTEDEVHLKVTDGLNSVDVVLSIQVLPMNDEPPQLVGGLRGELSCVEAGQVQITVD
YLSATDLDSDDSRLTYMLARSPGKGELQRAGLTVDKFSQQDLLQGHVYYVHTGGEIGPDP
VFDTVTLIISDGEAGGMDGCCHGDALPPPMALHGTLPVYDLNITVFPVNNKVPIVTLGES
MLVVDEGSSACLCGGVLGASDPDSPADRLTFYLETPPLHGFLENTLPTPGSEKSNAGVRV
ESFSLVHLTSGFINYVQSESKGAEPTVDQLSISVSDGLHRSALVLFYIIINPTNDEPPSL
LFANFTVKEGGMRELTPSLLNSFDLDAPPDILTFTLVQPSTHGSLINGIYGTEMSLPVTS
FTLQELRQGMKIVYMHDDTETLKDAVTLRLTDGIHTVQGTAWVTVLPVNDEKPRLLKNAG
LDVDSGERRVISSMVLEAQDLDTPTNQMYYFLNAAPRFGKLQLMTESSWTELSAGQNFTQ
DDVEMNRLWYTHTGGGATPKFKGHDSFRFILSDLDNESPTQSFFISIHTVRKGDLALVSK
AVRLLEGQRVVLNTNILLVSDSSGRPEELVYTVLVPPQHGLVHAVQQPGVPLTTFTQLDV
AAHRVCYTHDNSRHAETDFFSFVVTNGDSSRSGTLHLTVEHGDRIPPTLHQNTGLRLQDS
TTETVTSDQLQLTDPDTAAANLSYVITQPPRHGRLLLRGVPLSPPLMFSQTDVDGLNLAY
QHNLGSPADIDRFYFLPTDGNNRGYLEFGQLREEPAVFNIQVERMDRLPPSLTTRQSPSV
VVDLDGGRHGVLITSKHLQASDPDSPVEDLEFSIVRPPHSGYLENTLTGAYIKSRFTQRD
VDQRAVAFVLPADMEVTADSFLFSLTDTAGNTMLPEILELFWSRMELSATCYRTCETSGT
LQIQIQRSGKSADPAYVTIQVEGGSAKPGKDFTHSTASLIQFDTGVSVKTWNIYLIDDGL
EENHETFTVTLKKPKNAVLGQRTSAVVEIIDPIGGRCDPDDLKEEEDETRLPPFPPPPGL
PDPPSLKGEDAVTDIEAELLWENPPHPPRGDVPNRRPYLDYGEGDPQDQAAPGGYSHIHY
HSRQLPEARTGSTRHRVGHGGLKVHQSSERRSEEKVWTFHSLTPLRVEELKPGDVGWSWS
RHGRLPQDLRIGEPLQMDHPEPIHPPELRQRKTGKAISSSCPDSWTQYRRRCYIVSSSVA
SWASAERSCSLMFDSSLTSVRSRRDMVWLWKFAGRKPFWIGLSWASGRWMWADGRMLSFS
RLRASESAVGSDCVLVENPRSWISSRCSPETQHTYICSSPAHTH
NT seq
6435 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtcagtaatgcgctgttggggtggctactgctgctgctggtggcgacgatg
tccgtctgcagcagcaatctggtggcggtgaactcgggtgtggaggtcgcaaggggtcgg
tcggtgttcatcacggagagggagctgaagatcagcgtgggcccgactgcagactgtaag
gtggaggtggtgatgaatgaacccatcactcagagggtggggaggctgacaccgcaggtg
tttgactgcagcttcctgcaggatgaggtgaaatacgtccacgacggcagtcctatgctg
gaccaggacgcagtgatgctgagggtctacaggttcacggcctcggacacgctggtggag
atggtggttctgccggtgcgggtggtggactcagggtccagcgtggtggagctgggaagc
actccactcgtggtccctctgttctatggtttatccaacaccattgacggctccgtcctg
aacatccggaccacggcagacctggtttgcatcgtcaggctggtgaccaccgacaccagc
gtcccggctctgggtcagctggtgagggaggaggactccacacagagaaagggcagagag
acggcggtcctctgtcccgggaacaaaccctgtcgtcgtgacaccaaggaggttcgtttc
ctcaaaaccaactgccaagactttctgaactcgggtctgaagtaccagcacctcaggtct
tcatcgccggagatcgactacatccccatcagggtggagctgagggagcagggtaccagg
gctttgctggaggcagagtcggtgtggttgccggttctgattcatggtgcgatgcagaac
cagccaccccaggccgccttcatggcctccttcatcctggaggtggaccagttcattctc
accccgctcaccacagcctcgctggatgccaaggaccacgagacgccgcaggagaggctg
gtcttcaacgtgaccgccctgcccgctgagggctacatcacccacctgaacgaccacaca
aagcctgtcacgtccttcacatggctagacctccacgagatgaaggtggcctaccagccg
cccaacagcagccaatcgcaccgcaggaactatgaggcggagtttcaggctatagacagt
tcctacatgaccagcccacccattgtggtccacatctccatcagggcgacggaaacaaat
gcccccagagtctcctggaataggggtttggacttgctggagggtcagtcccgaccaatc
acgtgggaggagctgcagatagtggacaacgacaacatcgatgcagtctatcttgtagct
gtggacgggcctctctgtggacgccttagtgtaagaggtgggaaggcgttcatgtttcgt
gtgcgggaccttcaagagggcgaagtggtctaccaccactccgacagcgacaccacgcgg
gaccacgtcgtcttccgcatcagcgacggccgccacaccatccgccacaggttccccatc
aatgtactgcccaaggacgactcaccgccgttcctcatcaacaacatggcggtggaggtg
cgggagggcggagccgtgcggctggaggagttcatgctgttggcatccgacctggactcc
agcgatgactacatcctctaccgggtggcatccggccccatggcggggcagctagtgcgg
aagacgtccccccacgagacaggagatcccgtggacagtttcctacagagagatctcatc
aagggtcagatctactaccagcattcgggagaggagcagtttgaggacttctttgacttc
aagctgtctgacagccaccagccgcccaacctctcccaaacatatacggtggtgatccac
gttttcccggtgaaggaccagctgccggcggaggtctctggcagcgttcgctcgctgacg
gtgaaggagaccgaggtggtttatattacccaggctcacctccactttaccgaccgagag
catccagacacggacctgacctacgtcatcacgcagccctgcttcagcccactgcttcct
gggctgatggatgcagggcgtctgttctacacagacactgccaacagcatgaagagagat
cacatggtgccggtgttaaagtccttcacacagcatgcagtacgccacatgaaggtggcc
ttcatgcctccggtggaagacatcggcctggagccactgttctcccagtttgtcttctcc
gtcagcgaccaccacggcggcaccgtctccggccttcttttcaacatcaccgtcacccct
gtggacgaccaggccccagaggccttcaccaacctgctgcgggtggaggagggcggaggg
gcctttgttagagaggagcacctcctggttcaggacagggacagcagagaggagtctctg
agggcagaagtttggcggatggctcaacatggccggctggagctgcaaggccaagcgctg
cagcagagagacggattcactcttcaggatctgagaggactccgactcaggtacatccac
gacgactctgagactaccgaggatgaagtccatctgaaggtgacggacggtctgaactca
gtagacgtcgtcctttcgatacaggtcctgccaatgaacgatgaacctccccagctggtt
ggagggctgcggggggaactgagctgcgtggaggcggggcaggtccagattacagtggac
tatctgtcggctacagacctggacagcgacgactcccgactgacctacatgctggcccgg
agtccaggcaaaggggagctgcagagagctggattgaccgtagacaagttctcccagcag
gacctgctgcagggacacgtttactatgtccacacaggaggagagatcggacccgacccg
gtattcgacaccgtcacgctcatcatatctgacggcgaggctggtgggatggacggatgt
tgccatggagatgccctgcccccacccatggctctccatggcacgcttcctgtgtacgac
ctcaacatcactgttttccctgtcaacaacaaagtacctattgtcactctgggtgagtcc
atgttggtggtggatgagggctcctctgcctgtctttgtgggggggttcttggggcctca
gatcctgacagccccgccgaccggctgaccttttacctcgagacgccacctctgcacggc
ttcttggagaataccctgccgacgcctggctccgagaagagcaacgcgggagtccgagtc
gaatccttcagtcttgtccacctgacctctggtttcatcaactacgtccagtcggagagc
aaaggggcggagccgacggtcgaccagctgtccatcagcgtaagcgacgggctgcaccgc
tccgcccttgtccttttctacataatcatcaatccaaccaatgatgagccgccttcgctg
ctatttgccaacttcaccgtgaaggagggcgggatgagggagctgactccctcgttacta
aacagctttgacctggatgccccgccagacatcctgaccttcacgctggtgcagccgtcg
actcacggcagcttgattaacggcatctacggcaccgagatgagcctccctgtcacctcc
ttcaccctgcaggagctccgccaaggcatgaagatcgtgtacatgcatgatgacacggaa
accctgaaggacgctgtgactctgcggctgacagatggcatccacacagtccaggggacg
gcttgggtcaccgtgctgccggtcaacgacgagaagccacggctgctcaagaacgcggga
ttggacgtggactccggcgagcgcagggtgatttctagcatggtccttgaggcccaggac
ctggacacacctactaaccagatgtactacttccttaacgctgcgccgcgcttcggcaag
ctgcagctcatgacggagtcgagctggaccgagctgtcggccggccagaacttcactcag
gatgatgtggagatgaaccgcctgtggtacactcacacaggcggtggcgccactcccaag
ttcaaaggtcacgacagcttccgcttcatcctcagcgacctggacaatgagagccccacg
cagagcttcttcatctctatccacactgtgcggaaaggtgacttggcgctggtgagcaag
gcagtgcgtctgctggaggggcagcgcgtcgtcctgaacaccaacatcctgcttgtgtcg
gactcgtctggtcgtccggaggagctggtctacacggtgttggtcccgccacagcacggc
ctcgtccacgccgtccagcagccgggcgtccccctgaccaccttcacacagctggatgtg
gccgcccatcgagtgtgctatacccacgacaacagccgccacgcggagacggacttcttt
agtttcgtcgtcaccaacggcgactcgtcccgcagcggcaccctccacttgaccgtcgag
catggcgaccgcatcccgccaaccctccaccagaacacgggcctccgactacaggacagc
accacggagaccgtcacctccgaccagctgcagctcaccgacccggacaccgccgccgcc
aacctgagttacgtcatcacgcagccgccgcgccacggcaggctgctgctgaggggagtc
ccgctgtcgccgccactgatgttctcccagacggacgtggacgggctgaacctggcttac
caacacaacctgggtagcccggcggacatcgacaggttctacttcctgccgaccgatggg
aacaacagaggataccttgagtttggacagctgagagaagaaccggctgtctttaacata
caggtggaacgtatggacaggttacctcccagtctgaccaccaggcagagtcccagcgtg
gtagtggatctggacggcgggcgtcacggcgtcctcatcacttccaaacacctgcaggcc
tctgaccccgatagccccgtggaggacctggagttctccattgtcaggccgccgcactcc
ggctacttagagaacaccctaacaggagcttatatcaaaagtcgcttcacgcagcgggac
gtggaccagcgagccgtggcgtttgttctcccggctgacatggaggtgacggccgacagc
ttcctgttcagcctcaccgacacagcaggaaacaccatgctgcccgaaatactggagctg
ttctggtcccggatggagctgtcggcgacctgctacagaacctgcgaaacctcggggacg
cttcaaatccagatccaacgcagcgggaagagcgctgaccctgcgtacgtcaccatccag
gtggaggggggatcagccaaacccggcaaggacttcactcacagcacagccagcctcatc
cagttcgacacaggagtcagtgtgaaaacctggaacatttacctgatagatgacggtctt
gaggaaaaccacgagacctttactgtcaccctgaaaaaacctaaaaacgctgtcctggga
cagaggacctccgctgttgtagaaatcatcgaccctataggaggacggtgtgatccagac
gacctgaaggaagaagaggatgagacacgactccctccttttcctccacctccaggcctt
ccagaccctcccagcctgaagggcgaggacgccgtcaccgacatcgaggcggagctgctg
tgggaaaacccgcctcaccctccccggggtgacgtcccaaaccgcaggccctacctggac
tacggagagggggacccacaggaccaggcggcccccggcggctacagccacatccactac
catagcaggcagctgccagaggcaaggactgggagcactagacacagggtcggacacgga
ggactgaaggtccatcagtccagcgagaggagatctgaggagaaggtctggacgttccac
agtctgactcctctccgggtggaggagctgaagccaggagatgtcgggtggagctggtcg
cgtcacggtcgcctcccacaggacctccgcatcggggagcctcttcagatggaccatcca
gaacccatacacccaccagagcttcgtcagcgcaagacggggaaagcaatcagcagttcc
tgcccggacagttggactcagtacaggagacgctgctacattgtcagctcgtccgtggcc
agctgggccagtgccgagaggagctgctctttgatgtttgacagcagcctgaccagcgtg
cggtccagaagagacatggtctggctgtggaagtttgcaggaaggaagccattttggatc
ggtctatcttgggcttcgggtcgctggatgtgggccgatggtcggatgctgtccttctcc
agactgagggcatccgagtccgctgtcggctcggactgcgtgctggtcgaaaatcccaga
agctggatctcctcacgctgctcccccgaaactcaacacacatacatctgctcgtcgccg
gctcacactcactga
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integrated database retrieval system
