KEGG   Clinocottus analis (woolly sculpin): 137794809
Entry
137794809         CDS       T10471                                 
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein-like isoform X1
  KO
K18412  trinucleotide repeat-containing gene 6 protein
Organism
cana  Clinocottus analis (woolly sculpin)
Brite
Messenger RNA biogenesis [BR:cana03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     137794809
Chromosome and associated proteins [BR:cana03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    137794809
SSDB
Motif
Pfam: TNRC6-PABC_bdg M_domain Ago_hook UBA_7 UBA RRM_1 RRM_occluded UBA_NBR1_C THOC7 Mei5_like
Other DBs
NCBI-GeneID: 137794809
NCBI-ProteinID: XP_068447925
LinkDB
Position
Unknown
AA seq 1948 aa
MEEKKKKKQEEKTKTDVAQKTAADQKPKVPEPAPTKPSPGPPHHHQHHHHHRPASPTLPL
SSSSSSGNGKRASSSSQLPTQTPQQCQLSSASARYPPREVPPRFRQQEHKQLLKRGQPLP
AGALSALTLSCSSSSSSSLPSSSYSSPSTTTSSTSPNSATSTVGKRHPDTSLQSGSVAQY
ETSPWGDSLPVDSACSANTWDKVIIDRSDTEAWSSISRSSDPGHPAAPECSLGSASSNTD
TSAVTTTSSNSFLSMATGAAGQQAHYSSLKANNNMMTGPGSANTCGSRGWGSDGKQDGMN
GGRVGAPNNWGSTNLNLNLNPNANPSAWPVLGQEGGGGCGIGPNVVSNSPSLPPGMNGNM
GNGSLGGADNGGGGWGGMMSTNENDQQHSSTNTSLSFKMDPSNLNTDGPNHTKQQQAQDP
MSPIHGITGWGGQSPTESSQLNGDRTSSSVWGSGETKAADSPKESGWDSTPSGGLSGWGR
QGSGGGSSGSGGWADWKKSSGGGEASKGWDSVDAGSSGSGQEQQPSSWGQQPRTAPASDG
SGDSNESHSGRDRSSSTDCTPLLPRQDLDPRVLSNMGWGQTPIRQHTVWEMEEANSDEGK
MKSSSASTGCSSSNVRPSSINGGTVNPKIGPSQRPASGEKSDNEGSSSSGWRAPSTQPIQ
TVSGWGDPPQSLSKAQNGTNSGWGDPLPPNAPRNGGTPSWGSEEKSSGWDDGMTKSQPTN
WGEGPKSSHGWGNGHGGNSNGGGNGHGGNSNGGNSNGGNSNGGNSHGGSNGTSTGEWGEV
EVKKNGSSSSMWEGEGGNGGGGGWKESPRGGNRGGGGGGSGGGGWNKPAPAPAVSNSSWG
EIPRVNGPVQGNWGSSKPQESGSSSSSNGSGGGGSMGSWGGPGTVKQNSSSWGNGSKQDQ
GMDPTGWEEPSPPSIRRKMEIDDGTSTWGEPATLNKTGNMWDRKNPNNNPGSSGPPPSKG
GVVIIPNNNNNNHSVGPGNNNHHHTHHMHHHPHHSQHPPPLQHHGNNNGPSNNGPPHPGA
GPQGRPPLANPGWGEIPNVQPKSEPAWGEPAAPTSSVDNGTAAWGKSTGAPPVGGGGGGG
GVGGWGDGSHEPSGPYGRANGPTGSSACKPGPKPMQDGWGNGGEEMGMSTNQWDAEDGDM
WNSPTSQESSSSCNSWGNGPKKGPSKGKMGKPDEAWIMNRLIKQLTDMGFPRDPAEEALK
SNNMNLDQAMSALLEKKTDLDKRGMGMSDYSNGMNKPMMCRPSALSKDPSDRTSFLDKDG
GLSDDAPPSPFLPSPSLKLPLANSSLPGQGLGQGNPGLAMQNLNNRQIPSGMFGSSGAAQ
TRAMQQQQPPQPPVPSLSSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTSPIN
PQQMTLLYQLQQLQMAYQRLQIQQQMMQAQRNVSGPIRQQEQQVARTITNMQQQIQQHQR
QLYQALLMKQQQHPSHSSSAGLHNPGGPSGGHGSGKSTHDPYAGAHQAPGLADTLHTKEP
PSSPNAYSNYPLSGLNPNMNVNCMEVGGMSLKEPPQPQSRLSQWTHSNSMDGLSGNSSHM
ENNLNKHGAISAASNLGPPGKPPHLEDSYSPYNLMSRSESPTSPMVPQDSWGQAKSPNEK
ISNGTNINWPPEFCPGVPWKGLQNIDPENDPNMTPGSVPSGPTINTNIHDVNRYLLRDRN
GGKMSDMKSTWSPGPISQGQASLSHELWKVPQGPRSNAAPTRPPPGLSHNKPSSTWGGNS
LGLAQGWSGSYTNEGTTWSTDSSSRTSSWLVLRNLTPQIDGSTLRTLCMQHGPLVTFHLN
LTQGNAVVRYSSKDEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFFAQGQSLGATTTSW
QANSVTNQNRMGGAAQSHSMNQWSSGGGGGGCGGKSSGGGGGGDLLWGGMPHYSSLWGPP
SGDDARVIGSPTSINTLLPGDLLSGESM
NT seq 5847 nt   +upstreamnt  +downstreamnt
atggaagaaaagaaaaagaaaaaacaagaagaaaagaccaagacggacgtcgctcagaaa
acggctgctgatcagaaacccaaagtgccagagcctgctcccactaagcccagtcccggc
ccaccccaccaccaccaacaccaccatcaccaccgccccgccagccctacgctgcccctc
tcctcctcctcttcttctggcaatggcaagcgcgcctcctccagtagccaactcccgacc
cagactccccagcagtgccagttgtcctctgccagtgctcgctacccgcccagagaggtg
cccccgcgcttccgccagcaggagcacaagcagctcctgaagagaggccagccactgcct
gcaggagccctcagcgcgctcaccctctcctgttcctcttcctcctcctcgtctttgccc
tcatcgtcttactcctctccttccacgactaccagcagcacttccccaaactcggccacg
tccactgtgggcaaacgccacccagacacatccctccagagtggctccgttgcccagtat
gagacctctccttggggagactctttgccagttgacagcgcctgcagtgccaacacctgg
gacaaagtgattattgaccgaagtgacacagaagcttggtcctccatcagccgcagtagt
gaccccggccaccccgcagcaccagaatgctccttgggctcagctagctctaacacagac
acaagtgctgtcactaccactagtagtaatagttttctgagtatggccacaggtgccgca
ggccagcaggcccactactcctctcttaaagctaacaataacatgatgacgggacctggg
tcagccaacacatgcggtagtcgaggctggggctcagatgggaaacaagatggtatgaat
ggtggtcgagtaggtgcacccaataactggggctctaccaatttgaacttgaacctcaat
cccaatgccaacccatcagcttggcctgttctgggccaggagggtggtggaggttgtggt
attggccctaatgtggtgtcaaactctccatccctcccaccaggcatgaatggaaacatg
ggaaatgggagcctgggaggtgcggataatggtgggggaggttggggtggcatgatgagt
actaatgaaaatgatcaacagcactcttcaactaacacaagcttgtccttcaaaatggat
ccttctaacctcaacactgatggaccaaaccacactaagcagcagcaagctcaggatcct
atgagccctatccatgggataactggctggggaggccagtcacccactgaatcatcccag
ctgaatggggacagaacaagcagctctgtatggggtagtggagaaaccaaggcagctgac
tctcccaaggaatcaggctgggactcaactccctctggaggcctttctggttggggccgg
caaggcagtggtggtgggagcagtggtagtgggggctgggctgactggaagaaatcctct
ggtggcggagaggcatcgaaaggctgggactcagtagatgctggtagctctggttcaggc
caagagcagcaacctagctcatgggggcagcagcccagaacagccccagcaagcgacggt
agtggggacagcaacgaaagtcactctggccgagacaggtcttccagcacggattgtacc
cctctgctaccccggcaggacctggaccctagggtgctgagtaacatgggttggggacag
acccctatccgacagcacactgtatgggagatggaagaagccaactcggatgaagggaaa
atgaaaagcagctcagcctccacaggatgctccagctctaatgttagaccctcatccatc
aatggaggtaccgtcaacccaaaaattggccctagtcagaggcctgcgtctggagaaaaa
agtgataatgaaggatcatcatcttctggctggagagccccttcaactcagcctatccaa
actgtatcaggatggggggaccccccacagtcactcagcaaagcgcagaatggcactaac
agtggctggggggaccctttgcctcccaatgcacccagaaatggaggcacaccgtcctgg
ggttctgaggaaaagtcatccggttgggacgatggcatgacgaaaagtcagccgactaac
tggggagagggccccaaaagctcccatgggtggggcaacggtcatggcggtaacagtaat
ggcggcggcaacggtcatggcggcaacagtaatggcggcaacagtaatggcggcaacagt
aatggtggcaacagtcatggtggctctaacggcacaagcacaggagagtggggagaggtc
gaggtcaagaagaatggatcatccagcagcatgtgggaaggtgaaggaggtaatggagga
ggtggtggatggaaggagagccccaggggaggaaatagaggtggtggaggaggaggaagt
ggaggcggaggctggaataagcctgctcctgctcctgccgtgagtaatagcagctggggg
gagatcccacgtgtcaatggcccagtgcaaggaaactggggctcttctaagccccaggaa
agcggcagcagcagcagcagcaatggtagcggaggaggtggcagcatgggctcatggggt
ggtccagggaccgtgaagcagaactcatcgagctggggaaatggcagcaaacaggaccaa
ggcatggatcccactggctgggaagagccctcccctccgtctattcgcaggaagatggag
attgacgatggaacgtccacctggggcgagcctgctaccttgaacaagactggcaacatg
tgggatcgcaaaaatcccaataataacccaggcagcagtggcccgccgcccagtaagggt
ggtgtagtgattatccccaacaataacaacaataatcactctgttggccctggcaacaac
aatcaccatcacacccaccacatgcaccaccaccctcatcatagccagcacccacctccc
ctgcaacaccatggaaacaacaatgggccatccaacaatggccccccacatccaggtgcg
ggcccccagggtagaccacccctcgccaacccaggttggggagaaattcccaatgttcag
cccaagtcagagcctgcttggggagagccagccgctccaacatcatctgtggacaatggc
accgctgcctggggcaagtccacaggggctcccccggttggtggtggaggaggtggaggt
ggagtaggaggatggggagacggtagtcacgagccctctggaccctacggcagggccaac
ggacccacaggttcttcagcctgcaagccaggtcccaaacctatgcaagatggctgggga
aatggaggggaggagatgggcatgtctactaaccaatgggatgctgaggatggggacatg
tggaacagccctacatcccaggagagcagctcttcttgcaactcctggggcaatggcccc
aagaagggcccgagcaagggcaagatgggcaagccagatgaagcttggataatgaaccgt
ctaatcaaacagctcactgacatgggctttccgagagaccctgctgaggaggctttgaag
agcaacaacatgaaccttgaccaggccatgagcgccctgttggagaagaagacggacctg
gacaagcggggcatgggcatgtctgattacagcaacggcatgaacaagcccatgatgtgt
cggccctctgctctctccaaagacccctccgaccgcacatcctttcttgacaaggatggt
ggtctgtcagatgatgcccccccatcaccgtttttgccttcccccagcctgaagctcccc
ctggccaacagtagccttcctgggcagggtctgggacagggcaacccggggctggccatg
caaaacttgaacaacagacagatacccagtggaatgtttggcagtagtggagcagcacaa
acccgggcgatgcagcagcagcagcctcctcagccaccagtgccatctctcagctcctcc
cagcctagtctacgtgctcaagtgcctcagtttctctcccctcaggtccaagcacagctc
ttgcagtttgcagcaaaaaacattggtctgaaccctgcacttttaacctcaccaataaac
cctcaacaaatgaccctcttgtaccaacttcagcagctgcaaatggcgtaccagcgttta
caaatccagcagcagatgatgcaggcgcaacgcaatgtttccggccccattagacaacaa
gagcagcaagttgcacgtacaatcaccaacatgcagcagcagatccagcagcaccagcgt
cagctgtaccaagcgctgctgatgaagcagcagcaacatccctctcactcctcctccgcc
ggtctgcataaccccggcggcccctccggaggacacggttccggcaaatcaacccatgac
ccatacgcaggcgcacaccaggctccgggcctagccgacacactgcacaccaaagagccg
ccgtcttcgcccaacgcctacagcaactaccctctctctggactgaatccaaacatgaat
gtaaactgcatggaggttgggggtatgtccctgaaggagcccccccaaccccaatcccgc
ctgtcccagtggacacactctaactccatggacggcctctctggcaactcctcacacatg
gagaacaacctcaataagcacggtgccatatctgctgcctctaacctgggcccccccggg
aagcctccccatctggaggactcgtacagcccttacaatctaatgtccagatctgagtcc
cccaccagccccatggtgccgcaagacagctggggccaagccaagagccccaatgaaaag
atctccaatgggaccaacatcaactggcccccagagttctgcccgggtgtgccgtggaag
ggccttcagaacatcgacccagagaatgaccccaacatgacccctggcagcgtgccaagc
ggccccaccatcaacaccaacattcacgacgtcaaccgatacctgctgcgggacaggaat
ggaggcaagatgtctgacatgaagtccacctggtccccgggtcccatctcccagggccaa
gcctctctgtcccacgagctgtggaaagtccctcaggggccacgcagcaacgctgcccct
actcggcccccaccgggtctcagccacaacaaaccctcctccacctggggcggcaactcg
ctgggcctggcccaaggctggagcggctcctacaccaatgagggaaccacctggagtact
gacagctccagcaggaccagcagctggctggtgctgaggaacctcaccccacaaatcgac
ggttcgactctgcggacgctgtgcatgcagcacggccccctggtcacattccacctcaac
ctgacccaggggaacgccgtggtgcgctacagctccaaggatgaggccgcgaaggcccag
aagtctctgcacatgtgtgtgcttggaaacaccaccatcctggcggagtttgccggcgag
gaggaggtgaaccgcttctttgcacaaggccagtccctgggggcgaccaccactagctgg
caggccaactcagtaaccaatcagaaccggatgggcggggcagcacagtcccactccatg
aaccagtggagcagcggcggcggcggcggcggctgcggaggcaagtccagcggcggcggc
ggcggcggcgacctgctgtggggcggcatgccccattactccagcctgtgggggccgccc
agcggagacgatgcccgcgtgatcgggagccccacctccatcaacaccctgctgcctgga
gatctgctgagtggagagtccatgtag

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