Clinocottus analis (woolly sculpin): 137794814
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Entry
137794814 CDS
T10471
Symbol
pcdh7a
Name
(RefSeq) protocadherin-7
KO
K16498
protocadherin delta 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
137794814 (pcdh7a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cana01009
]
137794814 (pcdh7a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cana04515
]
137794814 (pcdh7a)
Protein phosphatases and associated proteins [BR:
cana01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
137794814 (pcdh7a)
Cell adhesion molecules [BR:
cana04515
]
Cadherins
Protocadherins
137794814 (pcdh7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
137794814
NCBI-ProteinID:
XP_068447962
LinkDB
All DBs
Position
Unknown
AA seq
1379 aa
AA seq
DB search
MQRLGAVHSSAAQALSLVVLALQLLTQLPGAHSALRYRVAEEGPPDVKIGNVAVDLGLTA
GTGSGDVTFALESGSEFFKIDNVTGELTTGLRRIDREKLPQCQMIFDENECFLDFEVSVI
GPLQSWVDLFEGRVVVTDINDNTPSFPSPVLQLSVEENRPIGTLYLLPTATDRDFGRNGI
DRYELIQDGGAGSSSTRRAAAGNPAAIGDRRGRSGDSGGGPRSTVFELQVADIPDGEKQP
QLIVKGTLDRELKDSYELVLRVRDGGNPPRSSQALLRVSITDVNDNSPQFERSTYEAEMA
ENAPPGTPVLQVRASDRDIGVNGQVEYVFGAATESVRRLLRLDEATGWLSVLHRIDREDV
AQLRFTVTARDRGQPPRTDRTTVILAVRDENDNVPVVEIRKIGRIPVRDGAALVPENVLV
DTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALPPLPADEAFDRNKKKYFLHT
SALLDYEATKEYSVTIVAVDSGSPSLSSNSSLMVRVVDINDHAPVFAQSVVEVHFAENNS
PGERVVTVVASDADSGKNAEIAYSLEPAGNGPFYIDADNGDIRATGVLDRELRERYELRV
IAKDKGTPSLQGSATVVIQVTDRNDNAPKFVQEIFTFYVKENLLANSPVGMVTVTDADEG
ENAELSLFVEMDGVDQKNAGEKVDGEDGEKENEEVFSIENNTGTIFSSASFDREKLSAYT
FRVRAVDGGEPRKTATATVSLFVTDENDNAPAITSPSNESYTLLPPASSARTIVRTVTAI
DSDTGPNADLHYALVGGNPFRLFEIGHTNGVITLAEPLERRHRGLHRLVIRVNDSGAPSL
CATTLVHVFINESLANATIVDAQVARSLMAPLSLDIAGDPDSERALGKQRLSVAIGVLAG
AAAVILVILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPPGAQPQAGHGRGSDRGRKPRR
DKRNGSGGGGAAAAGGKADRSLYSGIVTVNGLRRHANDDDDEDLSSASERLAARYCAMDG
DPGSPRMGGGRRHQSSPDLARHYKSSSPLPAVNLQPHSPPAEGKKHQAVQDLPPSNTFVG
SGGCAGSAGSSSSSNGSGNADAMSLGSDQCSDYGCQTGNKYSKQGTLRRVTFSVVSQPQD
AGCYDSGLEDSETPSSKSSSGPRLGALPLPEEGYERTTPEGSVGEEEHVENDARQLPDVA
LTGKCTRECDEFGHSDTCWMPVRHSPRQRHGSDPPRLSTFAPGDDNNNLRGNDHESDSES
AGSAGSSEPGVVVVVGGDGQRMPLANGDPLGSLGGGGGGGGGGGSDRNRNIGDHNRNLLN
RKMTSASYDTFSSAGFGRRQPDEEGGEGQNPTEVIPLTRTGGDYKTTSCLTLSRREVYL
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggcttggcgcagtgcactcctccgcggcgcaggctctcagcctcgtggtccta
gcgctgcagctgctgactcagctgccgggcgcgcactcagccctccggtaccgggtggcg
gaggagggcccgcccgacgtcaagatcggcaacgtggccgtcgacctgggcctcacggcg
ggcacgggcagcggggacgtcaccttcgccctggagagcggctccgagttcttcaagatc
gacaacgtgacaggtgagctgacgacgggcctgcggcgcatcgaccgggagaagctcccg
cagtgccagatgatattcgacgagaacgagtgcttcttggacttcgaggtgtctgtgatt
ggccccctgcagagctgggtggatctcttcgagggccgcgtggtcgtcaccgacatcaac
gacaacacgccttccttcccctcacctgtgctgcagctctcggtggaggagaatcgcccg
attggaaccctttacctgctgcccacagcgaccgacagggattttggacggaacggcatc
gaccgatacgagctgatccaagacggcggggcgggttcaagttcgacgagacgcgcggcg
gccgggaaccccgccgccatcggggaccggaggggcagaagtggcgatagcggcggcgga
ccccggagcactgtgttcgaactgcaggttgcagacataccagatggcgaaaagcaaccg
cagctcatcgtgaaaggcacattggaccgcgagctgaaggactcctacgagctggtcctc
agggttcgagatggagggaacccgccgcgttcctcccaagccctgctccgcgtctccatc
accgatgtcaacgacaacagcccccagtttgagaggtccacgtacgaggcggagatggca
gaaaacgctcctccaggtacgcccgtcctgcaggtcagagcttccgaccgcgacattgga
gtcaacgggcaggtagagtacgtcttcggagcggccaccgaatccgtccggcgactcctg
cgcctggacgaggccaccgggtggctgagcgtcctccacaggatcgacagggaggacgtg
gcgcagctgaggttcacggtgacggccagggaccggggtcagccgccccgcaccgaccgc
accaccgtgattttggccgtgcgggacgaaaacgacaacgtgcccgtcgtggagatccga
aagatcggacggatcccggttcgagacggtgcggcgctggtgccggagaacgtcctggtg
gacacccccgtggcgctggttcaggtgtcggaccgagaccagggagagaacggggccgtg
acgtgcacggtcgtgggagacgtcccgttcacgctgaagccggctggggaaacggcgctg
ccgcccttacctgcagacgaggcctttgacaggaataagaaaaaatactttttacatact
tctgccttgctggactatgaggccaccaaagagtacagcgtcaccattgtggcagtggat
tctggcagccccagcctgtccagcaacagctcgctgatggtgcgagtggtggatatcaat
gaccatgccccggtctttgcccagagcgtcgtggaggtccacttcgctgagaacaactcg
cctggtgaaagggtcgtcactgtcgtggcctccgacgcagacagcggcaagaacgcggag
atcgcctactcccttgaacccgctggaaacgggccgttctacatcgacgcggataatgga
gatatccgtgccaccggggttctggaccgcgagctgcgagagaggtacgagctccgggtg
atcgccaaggacaagggcactccttccctgcagggctccgcgacggtcgtcattcaggtg
accgaccgcaacgacaacgcgccaaagttcgtccaggaaatcttcacattctacgtgaaa
gagaacctgctggccaacagcccggtgggcatggtcaccgtgaccgacgccgacgaaggc
gagaacgcggaactcagtttgttcgtcgagatggacggagtcgaccagaagaacgcgggg
gagaaggtggacggggaagacggcgagaaagagaacgaagaggtgttctccatcgagaac
aacacgggaactatcttctcttcggcgtcgttcgaccgggaaaagctctccgcctacacc
ttccgcgtccgcgccgtggacggaggggagccgcgcaaaaccgccaccgccacggtctcg
ctcttcgtgacggacgagaacgacaacgcccccgcaatcacgtctccgtccaatgagtcc
tacaccctccttccgcccgccagcagcgcccgcaccatcgtcaggaccgtgaccgccata
gattcggacaccggccccaacgccgaccttcactacgccctcgttggggggaatcccttc
cggctgtttgagatcggccacaccaacggggtgatcaccctggcggagcctctggagcgg
cgccacaggggcctgcatcgcctggtgatccgggtcaatgacagcggggccccctccctc
tgcgccaccaccctggttcacgtcttcatcaacgagagtttggccaacgccaccatagtg
gatgcacaggtggcccggagtctcatggctccactgtcgctggacatcgcgggggacccg
gacagcgagcgcgcgctcgggaaacagcgcctcagcgtggccatcggcgtcctggcggga
gcggcggcggtcatcctggtcatcctgctggtggtcacggctcggcagtgcggcgcccag
ggcaagaacggctacgaggccggcaagaaggagccggaggaggacttcttcagccccccg
ggggctcagccgcaggccggccacggcaggggctcggaccgcgggcgcaaaccccgacgc
gacaagcgcaacgggagcggcggcggcggcgcggcggcggcgggaggcaaggccgaccgg
tccctgtacagcggcatcgtgacggtcaacgggctgcggcggcacgccaacgacgacgac
gacgaggacctgagcagcgccagcgagcgcctggcggcccgctactgcgccatggacggc
gaccccgggagcccgcgcatgggcggcggcaggaggcaccagtccagcccggacctggcc
aggcactacaaatccagctcgcctctcccggcggtcaacctgcagccccactccccaccg
gccgagggcaagaagcaccaggcggtccaggacctgccgccctccaacaccttcgtgggc
agcggcggctgcgcggggagcgccggctccagcagcagcagcaacggcagcggcaacgcc
gacgccatgtccctggggtcggaccagtgctcggactacggatgccagaccgggaacaag
tacagcaaacaggggaccctccgccgggtgaccttctccgtggtcagccagccgcaggac
gccggctgctacgacagcggcctggaggactcggagacgccgagcagcaagagctcgtcg
ggcccgcggctcggagcgctgccgctgcccgaggagggctacgagcggaccaccccggag
ggcagcgtgggggaggaggagcacgtggagaacgatgccagacagctgccagacgtagct
ctgacaggaaagtgcaccagggagtgcgacgagttcggccactcggacacctgctggatg
cccgtgcgccactcgccccgccagcgccacggcagcgaccccccgcggctctccaccttc
gcccccggcgacgacaacaacaacctgcgcggcaacgaccacgagagcgacagcgagagc
gccggcagcgccggcagctcggagcccggcgtggtggtggtcgtgggcggggacggccag
aggatgccgttggccaacggggatcccctcggcagcctggggggcggcggcgggggtggc
ggcggcggcggcagcgaccgcaaccggaacatcggcgaccacaaccgcaacctcctgaac
cgcaagatgacctcggcgtcctacgacacgttcagcagcgcgggcttcgggaggcgccag
ccggacgaggaaggcggagagggccagaacccgaccgaggtcatcccgctgacgcgcacg
ggaggcgactacaagaccacgtcctgcctcacgctgtcccgccgagaggtctacctgtga
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integrated database retrieval system
