Clinocottus analis (woolly sculpin): 137794827
Help
Entry
137794827 CDS
T10471
Symbol
si:dkey-92j12.5
Name
(RefSeq) multiple PDZ domain protein
KO
K06095
multiple PDZ domain protein
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04530
Tight junction
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137794827
NCBI-ProteinID:
XP_068447991
LinkDB
All DBs
Position
Unknown
AA seq
1897 aa
AA seq
DB search
MEIMDAQLALEAVERLQAKLKERGEAPTQEKLSLLKTVLQSPLFHHILSLQQARRKPPAK
GKISKSVSMNCGPCQGMPLDLKTLSHSDSYTWAMENRGTARSIYKDGSLSSLGSQDLSFT
DIYPDNCVPTESQYCTPPRISRTMSMGRNLSAIAHERRHVEMIELINDGKGLGFGIIGGR
STGVMVKTILPGGAAGQDKRLRSGDQILRIGDTDLAGMNSEQVAQVLRNAGTKVKLLIAR
DATKDNHLSSPVLSQDSLDGKLKDLKDDYEFSVQFTKNSRGLGFTISSYIGDLNSVYSAG
VLVKSIVKGSTVDQDGRINLGDIVLSVDGASLQGCSEQRAMEILRRTGSLVRLRLLRKAV
RLSHILPPVPPLHPLRHSHSFHEGNPYRLGLNRIQETGICSLREISRRAAYANGRPRHSS
RNGVKLSPAEEEDLRKRWQHAVGQRYEVIVCQLERFSETSGLGISLEARAGHHYLCSVLP
EGPVGQSGKIFTGDQILEVNGIPLVGETHREVVNVLKELPKQVCLVCSHILPPAILDSDE
EEEADAHLTLKDLLAEFNDKLDQGCVIPCPTAEDITKRGVPPMSPPLAMWERDAQVVELE
KGELGLGFSILDYQDPEDVTKTVLVIRSLVHGGVADLDGRLLPGDRLMFVNDSDLEGSSL
DYAVHILKSTGYGTVRIGVAKPLPLELCGGLTPISERSLRASYDDTDSHAQISQLAEAAE
ANANTRNAEDSSVTQPCYISTQENRPRHRVSVMEDDQRQRAPPLPPRTSFERTITVVRGN
RSLGMSVSAIKDGSGMLVRSVVQGGSVSQDGRLGVGDAILAMNGEPTSHLTNARARAALR
RHSVVGPEISITYVPAHQVDQYRTRLCLPPLDSIAADSASSSPTPPTPSPEPARSPRPFR
APAPAPAPAPAPAASPAASPAAFRPVASVKFKAAALDPAAVRAGAASKAAFGGPFAAPTI
TPAPDSSWQILKSLPPKKEEEEEEEEEETAADVKASQPEAAAAAAVQVDGEEELPAHAAV
SWDQPRSVRLTRAPGRSLGISIMGGRGMGRRLSTGEMMRGVFVKHILLDSPAAHNGTLRT
GDRILEVCGVDLRDASHEQAVEAIRRAGDSVVFLVQSGQHRSQSPMLANHERRTPTPQSN
SHGGKEAETLSRFLTLSPTNPFTPTPFKVPSSTSDGTDRRSVAAPATAAESEGDTGRKKM
LQRYGSLSGKLHMIELEKDPAALGLGIGLSGNKDGSRARMSVHVAHVDPRGPAGLDGRIR
VGDELLEINGQILYGRSHQNASTIINNAPAKVKIILIRNKSAVGQVGSATWSEDAAGREG
LVTAVRQRVLPQDHTGLGLCPAARESRDEAGVRHAGASKDGRRQLGDRVVATGDEPVAAK
VPSLAPDRRVTADVSVGRSNSPSSPSSSSSSPALSRPRSLPPAASLPLPFPPPPTSPAGR
SDWLGAAPATSDPLIGPVAAGGETTIEFCKGSVGLGLSIVGGCDTLLGAVIIHEVNDGGA
AQRDGRLQAGDHLLEVNGIDLRQATHDEAIGVLRLTTQRVRMCVFRHQEAYREEDLWDVF
SLELRPRPGEGLGFATVGKSNDTGIFVSDLIRGGVADSDGRLLLGDQILSINGEDVRAAS
QEHAHELLQGCSGAVHLEVARFKAGLQYSQQSQSEDSDCSTVTHSSGCDASLGHQRETDN
RTGSYSFQDDPDAKQVFIQKGSCDSLGISVAGGAGSPHDNVPLFIATMDTDGLAAKTHQL
QAGDRILSINDVSVEGMTAAQAGVLLQNATGALHLQVAGGSGGCSTKDHNDGRAAASEPP
SSFHNHLCARTYKTVSLERGPSGLGFSIVGGFSSPHGDLPIYIKTVFNKGAAVEDGRLKR
GDQIIAVNGHCLEGVTHAEAVDILKKTRGTVVLTVLS
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcatggacgctcagcttgccttggaggccgtggagagactgcaagccaagctg
aaggagcgaggagaggcccccacgcaggagaaactctccctgctgaagacggtcctgcag
agccccctgttccatcacatactcagcttacagcaagctcgccggaagcccccggcaaag
gggaagatttccaaatccgtgtccatgaactgtggcccctgccagggcatgccgctggac
ctgaagacgctgagccacagcgactcctacacatgggccatggagaaccgaggcaccgcc
agatccatctacaaggacggcagcctctcctccctcggctcgcaggatctgtccttcacg
gacatctacccagacaactgcgttcccactgaatcgcaatactgcaccccacctcgaatc
tcccgcaccatgtccatggggagaaacctgtctgccattgctcacgagcggcgtcacgtg
gagatgatagagctgattaacgacgggaaagggctcgggtttggcatcataggagggcgg
agcacaggtgtcatggtcaagactatacttcctggcggagctgccggacaggataagcgc
ctgcgtagcggtgatcaaatcctgcgcattggagatacggatctggcgggcatgaacagc
gagcaggtggcacaggtgctgcgaaatgccggtaccaaggtgaaactgctcattgcaagg
gatgctaccaaggacaaccacctttcctctcctgtgctcagccaagacagcttggacggc
aagctcaaagacttgaaggacgactatgagttcagtgtgcagttcactaagaacagtcga
ggcctgggattcaccatttccagctacataggtgacctaaactcagtctacagcgcaggt
gtgttagtgaagagcatagtgaaaggcagcaccgtggaccaagacggacgcatcaacctc
ggagacatcgtcctatctgtggacggggcgagcctgcagggctgcagcgagcagcgcgcc
atggagatcctgaggaggacgggctccctggtccgactgaggctgctgaggaaggccgtc
cgcctgagtcacatcctgcccccggtgcctccgctgcacccgctccgacactcccacagc
ttccacgagggcaacccctacagactgggcctcaacaggattcaagagacaggaatctgc
tccctgcgtgaaatctcccggcgagcggcgtacgccaacggacgtccccgacacagctcc
agaaacggtgtgaaactgtcaccggctgaggaggaggacctgaggaagaggtggcagcat
gcagtcggacagcgatatgaagtcattgtgtgtcagctggagcggttcagcgagacgagc
ggtctcggcatcagtctggaggcccgggctgggcatcactacctgtgctccgtcttaccc
gagggccccgttggccaaagcggcaagatcttcaccggagaccagatactggaggtgaat
gggatccctctcgttggagagacgcacagggaggtggtcaatgttttgaaggagctaccc
aagcaagtctgcctggtgtgctcgcacattttaccccccgccattctcgacagcgatgag
gaagaggaggccgacgcccatctcacgctgaaagacctgctggccgagttcaacgacaag
ttggaccagggctgtgtcatcccctgtcccacggccgaggacatcaccaagcgtggcgtg
cccccaatgtcgccccctctggccatgtgggagagagacgctcaggtggtcgagctggag
aaaggcgagctgggactgggcttcagcatcctggactaccaggatccggaagatgtcacc
aaaacagttctggtgatccggtccttggtgcacggcggtgtcgcggatctggacggtcgc
ctgctgcccggtgaccggctcatgttcgtcaacgacagtgacctggagggctccagcctg
gattacgccgtgcacatcctgaagtccaccggctacggcactgtgcgcatcggagttgcc
aaaccactgccgctggaactgtgcggcggcttgacgcccatctcagagaggagcctgcgg
gcgtcctacgatgacaccgacagccacgctcagatcagccagctagccgaggcagcggag
gctaacgccaacacccgcaacgcagaggacagcagcgtcacccagccgtgttacatctca
acgcaggagaaccggccgcggcatcgcgtcagcgtcatggaggacgaccagaggcagcgg
gcgccgccgctgcccccccgcaccagctttgagaggacaatcacagttgtccggggcaac
cgtagccttgggatgtcggtgagcgctatcaaggacggctcaggcatgctggtgcgcagc
gtggtccaggggggctctgtcagccaggatggcaggctgggggtgggggacgccatcttg
gccatgaacggagagccgacctcccacctgaccaacgccagggccagagccgcgctgcgc
agacactccgtcgtagggccggagataagcataacctatgtcccagcccatcaggtggat
cagtaccgtacccgtctgtgtttaccccctctggactccatcgcggccgacagcgcctct
tcctcacccaccccgccgaccccttctccggagcccgccagatccccccgtccgttcaga
gctccggctccggctccggctccggctccggctccggctgcgtctccggctgcgtctccg
gccgccttcagacccgtcgcctcggtcaagttcaaagccgcggcgctggatcctgcggcg
gtcagagccggcgctgcatccaaagctgcattcggaggcccgttcgcggcccctaccatc
accccggccccggactcgagttggcagattctgaaatctctccctcccaagaaggaggaa
gaggaggaagaggaggaggaggagaccgctgcagatgtgaaagcctcacagccggaggcg
gcggcggcggcggcggtacaggtggacggagaggaggagcttcccgctcacgccgccgtt
tcttgggatcaaccgagaagcgtgcggctgacgcgagcgcccggccggtccctgggcatc
agcatcatgggaggcagaggcatgggccggagactgagcaccggagagatgatgagggga
gtcttcgtcaagcacatcctcctcgacagcccggcagcacataacggcacccttcggacc
ggagacaggatactagaggtgtgcggcgtggacctaagagatgccagccacgagcaggcg
gtggaggccatccgcagggccggagactccgtggtcttcctggtgcagtccggacaacac
agatctcagtccccgatgctcgccaaccacgagagacgaaccccgacgccccagtcgaac
tcgcacggcggcaaggaagcagagactctcagtcggttccttaccctctcccccacaaac
cccttcactcccaccccctttaaggtgccttcgtcgacatccgacggaacggatcggagg
agcgtggcggcgccggccacggcggccgagagcgagggcgataccggcaggaaaaagatg
ctccagcgttacggcagcctgtccgggaagctccacatgatcgagctggagaaggacccg
gcggccctcggcctcgggatcggcctctcgggcaacaaggacggctccagggcccggatg
agcgtccacgtggctcacgtcgacccccgaggacccgccggtctggacgggaggatacgg
gtcggggacgagctgctggagatcaacggtcagatcctgtacggccggagtcaccagaac
gcctccaccatcatcaacaacgctccggctaaagtcaagatcatcctcatcaggaataaa
tcagctgtgggtcaggtggggtccgccacatggagcgaggacgcggccgggcgcgaggga
ttagtcacggccgtgcggcagcgcgtcctccctcaggatcacacaggtctcggcctctgc
ccggcagcccgggagtccagggacgaagcgggggtccggcacgctggagccagtaaagac
ggcaggagacagcttggagacagagtcgtagcaacgggtgatgaacctgtggcggccaag
gtgcccagtttggctccggaccggcgggtcaccgccgatgtctccgtgggccgctccaac
agcccttcctccccctcctcctcctcctcctctccagctctctcccgtccccgctctctc
ccccccgccgcctccctcccgctccccttccctcccccgcccacctctcccgcggggcgc
tccgattggcttggggcggctcccgcgacgtcggaccccctgatcggcccggttgcggcc
ggcggcgaaaccaccatcgagttctgcaaagggagcgtaggcctgggcctcagcatcgtc
gggggatgcgacaccctgctgggggcagtgataatccacgaagtaaacgatggaggagca
gcacagagagacgggaggctgcaggctggagaccacctattagaggtcaacggcatcgac
ctgcggcaggccacccacgacgaggccatcggcgtgctgcggctcaccacccagcgcgtc
cgcatgtgcgtcttcaggcaccaggaggcctacagggaggaggacctgtgggacgtcttc
agcctggagctgaggccccgcccaggggaggggcttgggttcgccaccgtggggaagagt
aatgacacgggcatctttgtgtcagatctcatcagaggaggcgtagcggattcggatggc
aggttgttgctcggagaccagatcctgtcaatcaacggcgaggacgtccgcgcggcatcg
caggaacacgcgcacgagctcctgcagggttgcagcggagcggtgcacctggaggtggct
cgcttcaaagctgggctgcagtactcacagcagagccagagcgaagactccgactgctcc
accgtgacccactcaagcggctgcgatgcctcactcggccaccagagggagacagacaac
aggacggggagctactcttttcaagacgaccctgacgccaaacaagtcttcatacaaaag
gggtcatgtgactccctgggcatcagtgtagcaggaggagcgggcagtccccatgacaac
gtgcctctttttattgctaccatggataccgatggactggctgccaaaacacatcaactc
caggcaggagaccggatcctcagcatcaatgatgtgtccgtggagggaatgactgccgcc
caggctggagtcctgctgcagaacgccaccggagccctccatctgcaggtggcaggcggt
tctggtgggtgcagcacaaaggaccacaacgacggacgggcggcggcgtcagaaccgccg
agcagcttccacaaccacctctgcgctcgcacgtataagaccgtctctctggagaggggc
ccctcgggcctgggcttcagcatcgtgggagggttcagcagccctcacggggacctgccc
atctacatcaaaacggtcttcaacaagggtgcggctgtggaggacggccggctgaagcgc
ggggaccagatcatcgccgtgaacggacactgcctggagggcgtgactcacgccgaggcc
gtggacatcctcaagaagaccagagggaccgtggtgctgacagtgctctcttga
DBGET
integrated database retrieval system