Clinocottus analis (woolly sculpin): 137794901
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Entry
137794901 CDS
T10471
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137794901 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137794901 (fip1l1b)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
137794901 (fip1l1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
137794901
NCBI-ProteinID:
XP_068448135
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MSAEEADKTATTDASAGDEEEEWLYGDEETKDEDEEAKLNAAVSAPADALTEEAHATGNG
VASEATGDGEAEGDGDVAAVEAAPAGEDVDSDSDSDDDDDDVRVTIGDIKTGAPQYTTYG
APPVNLNIKTTGSRPYGQASKLKGVDLDAPGNINGVPVLEADVESFEEKPWRKPGADLSD
YFNYGFNEDTWKAYCEKQKRLRMGLEVSNVGSVTSKITVQQGRTGNDKDMSSLPIHTPKP
DFTSPINMYKPPPVNLVPRISPPQWPPGPPPQDMSYYTKTSGTIDVIGGGTATISRVEGR
RRHNLEGNNIQVIAEQTDADPAPAKLPTFFPPGPHPPNIPPPPFLPPPPNVNSAPPLIPL
PRLPITVPPPGFPPPPSGPPPAIIPSMDSGHPGGYDGRGVPPYPFPQGAYPPPMTGGVPP
PWPPMMDNTKPWGDYYARRDDKREKERERPRERTHEREREREHSPSAMSYTSDEERFRYR
EYQQERGYGDRHRERSSREKEERHRERRHREKEEGRHKSSRSSSSRRRHESEEGDSHRRH
KHKKSKRSKEGGKEGGDEISADQENQEVME
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggaagcggacaaaacagccaccactgatgccagcgccggagacgaggag
gaggaatggctctacggagatgaggagaccaaagatgaggacgaggaagccaaactgaat
gctgctgtcagtgcgcctgctgatgctttgacagaggaagcacacgctacaggcaatgga
gtggcctctgaggcgacaggtgacggtgaggctgaaggtgatggcgacgtggcggcagta
gaagcagcacccgcaggtgaggacgttgacagtgacagcgacagtgatgacgacgacgac
gatgtccgcgtcaccattggagacataaagacaggagcgccacagtacacaacgtatggc
gctccacctgtcaatctcaacataaagacaactggctccagaccgtatggacaagcctcc
aagctgaagggagtggatctggacgctcccggtaacatcaacggggttccagtgctggag
gcggacgtggagtcatttgaagagaaaccttggagaaagccaggagcggatctgtcggac
tactttaactacggcttcaatgaagacacatggaaggcttattgtgaaaaacagaagaga
ctgcgcatgggcctggaggtctctaatgtcggctcggtgacgagcaagattaccgttcag
caaggcaggacggggaacgacaaggacatgtccagtttgcccattcacacgccaaagcca
gacttcacgtctcccatcaacatgtacaagcccccccctgtcaacctggtccccaggatc
tccccccctcagtggccccctggtccgcctcctcaggacatgtcctattatacgaagacg
agtggtacgatagatgtgatcggtggagggacggccaccatcagcagggtcgaagggcgc
cgcagacacaacctagaaggcaacaatatccaggtgatcgccgaacagacggacgccgac
ccggctccggctaagcttcccacctttttcccccctggaccacatcctccaaacatcccc
ccacctccgttcctccctcctccacccaacgtcaactctgcacccccgctcatcccccta
cccaggttgcccatcactgttcctcctcctggtttcccgcctccacccagcggccctcct
cccgctatcatcccctctatggacagcggccaccctggaggttatgatggacgcggtgtc
cctccctacccgttccctcaaggcgcgtaccctccgcccatgaccggaggcgtccctcct
ccctggcccccgatgatggacaacactaaaccctggggcgactactacgcccgtcgagac
gacaagcgagagaaggagcgggagaggcccagagagaggacacacgagcgggagagagag
agggagcacagcccttcagcgatgagctacaccagcgacgaggagcggtttcgttaccgc
gagtaccagcaggagcgaggctacggggatcggcaccgcgagcggtcgagccgagagaag
gaggaaagacaccgagagagacggcaccgagaaaaggaggagggacgccacaagtcctcc
cgcagcagcagcagcaggcggaggcacgaaagcgaggagggcgacagccaccggaggcac
aaacacaagaagagcaagaggagcaaggaaggaggcaaggagggcggcgacgagatcagc
gcggaccaagagaaccaggaggtcatggagtag
DBGET
integrated database retrieval system
