Clinocottus analis (woolly sculpin): 137795090
Help
Entry
137795090 CDS
T10471
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137795090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cana03041
]
137795090
03009 Ribosome biogenesis [BR:
cana03009
]
137795090
Enzymes [BR:
cana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137795090
Spliceosome [BR:
cana03041
]
Complex A
U1 snRNP components
U1 related factors
137795090
Complex B
137795090
Ribosome biogenesis [BR:
cana03009
]
Eukaryotic type
Pre-60S particles
Helicases
137795090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
137795090
NCBI-ProteinID:
XP_068448462
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MPGFSDRDRGRDRGYGGGPPRFGGGGSGGGNRGGPPSGKFGNPGERLRKKHWNLDELPKF
QKNFYQEHADSTRRPLQEIEQYRRSKEVTVKGRDCPKPIIKFHEASFPTYVMEVIGKQNW
TDPTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHGDGPICLVLA
PTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEC
SKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFL
KDYVQINIGALQLSANHNILQIVDVCNDMEKEDKLIRLLEEIMSEKENKTIIFVETKRRC
DELTRRMRRDGWPAMGIHGDKSQQERDWVLNEFRYGKAPILIATDVASRGLDVEDVKFVI
NYDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASDLIAVLREANQAINPKLIQM
SEDRGGRGRGGRGGYKDDRRDRYSGGGRSNFGSSSYRDRDGDRGFGTGQKSAFGGNKAQN
GGSFGGNGGNCSGSYGNNNFSSNGQGNFGAQANQVGAFGNQSFQGPPQFGAMQRAGQNGM
NHPPFPFNSQPPPPQAQQPPPPPPMVPYPMPPPFPQ
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgcctggattttcggaccgagatcgtggcagagatagagggtatggtggaggacctcct
cgttttggtggcggaggcagtggcggaggtaatagaggtggacctccttcaggaaagttt
ggcaacccgggtgagaggctgcgaaagaagcactggaaccttgacgagcttccaaagttt
caaaagaatttctaccaggaacatgcagattccactcgcagaccacttcaagagattgaa
cagtaccgaagaagcaaagaagttaccgtcaaaggcagagattgccccaaaccaattata
aaattccacgaagcttcatttccaacctacgtcatggaagttattggcaaacagaactgg
acggatccaactcccattcagtctcaggggtggcctgttgccctgagtggcaaagacatg
gtcggcattgctcaaactggttctgggaaaacacttgcgtaccttctgcctgcaattgtg
cacatccaacatcagccattcttagagcacggagatggacctatttgcttggtgctggcg
ccaacccgtgagcttgctcagcaggtgcaacaagtggctgctgaatacggcagggcttcc
cgactcaagagcacttgcatctacggcggtgctccaaaaggaccccaaatcagggacctt
gagagaggtgttgagatttgcatcgctaccccgggtcgtctcattgacttccttgagtgt
agtaagactaatttgcgtcgttgcacctatctggtgctggatgaagcagaccgcatgctg
gacatgggattcgaacctcagatccgcaagatagtggaacaaattcgaccagaccgtcag
accctgatgtggagcgccacctggcctaaggaagttcgccagctggctgaggacttcctg
aaggactacgtccagatcaacattggcgcgctgcagcttagtgccaaccacaacatcctg
cagatagttgacgtttgcaatgacatggagaaggaggacaaactcatccgtttgctggag
gagataatgagcgaaaaggagaacaagaccatcatttttgtggagaccaaaaggcgttgt
gatgagctcaccagacggatgagacgagatgggtggcccgcaatgggaattcatggagac
aagagccagcaggagagggactgggtccttaacgagttcagatatggcaaagctccaatc
ctcatcgctacagatgtggcctcccgtggcttggatgtggaggatgtgaaatttgtcatc
aattatgactaccctaactcctccgaggattatatccatcgcattggacgcacagcccga
agtcaaaaaacgggcacagcctacaccttcttcacccccaacaatatgaaacaagccagt
gacctgatcgctgtgcttcgcgaggccaatcaggccattaaccccaagctgatccagatg
tcagaggacagaggaggtcgtggtagggggggaagaggtggctacaaggatgatcgtcgg
gataggtattctgggggtgggaggagcaactttggcagcagtagctacagggacagggac
ggtgatagagggtttggcactgggcagaagagtgcctttggtggcaataaggctcaaaat
ggtggcagctttggaggtaacggtggtaactgtagtggtagctatggcaacaacaatttt
agcagcaatggacagggtaattttggtgctcaggcaaatcaggtgggtgcctttggtaac
caaagcttccaggggccccctcagtttggggccatgcagagggctggtcagaatggcatg
aaccacccaccattcccattcaactctcagccaccaccaccacaggcccagcagccgcca
cctccaccaccaatggtgccctaccctatgccaccacccttcccacagtag
DBGET
integrated database retrieval system
