Clinocottus analis (woolly sculpin): 137795250
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Entry
137795250 CDS
T10471
Symbol
shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
137795250 (shoc2)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_LRWD1
LRR_9
LRR_13
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
137795250
NCBI-ProteinID:
XP_068448715
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSTLGKEKDSKEKDPKGGPAGKEREKEARALAGLVKDGGKETKTKGKDPKEGKKDTSSS
TPGVAFSVDNTIKRPNPAAGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPTSIK
ELTQLAELYLYSNKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNK
LREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIP
RTLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDIQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtactttaggcaaagaaaaagattcgaaagaaaaggaccccaaaggtggtcca
gcggggaaagaaagggaaaaagaggccagggctctagccggcttagtcaaggatggtggc
aaagaaacgaagaccaaagggaaagatcccaaagaaggaaagaaggacaccagcagctca
acaccgggtgttgccttctctgttgacaacacgataaagcggccgaacccggcagcaggt
acgcgcaagaagtccagcaacgccgaggtgatcaaagagctcaataagtgccgggaggag
aactctatgagactggacctatctaaacggtccattcacatcttgcccacctccattaag
gagttgacacagctggctgaactctacttgtacagcaacaagctgcagagcttgccagct
gaggtgggttgcctatcaggcctggtcactttggccctcagtgagaactccctgaccagt
ttgcctgactccctggactctcttaagaagcttcgaatgctcgacctccggcacaacaag
ctgagagagataccagccgttgtctaccggctgacatctctgaccacgctgtacctgcgc
ttcaaccgcatcaccacagtggagaaggacatccgaaacctatccaagctcactatgctc
agcattcgtgagaacaagattaagcagctgcccgcggagataggggagctatgcaacctc
ataactctggatgttgcccataaccagctggaacacctaccgaaggagattgggaattgc
acacagatcaccaacctcgacttgcagcacaatgagctcttggacctcccggagactata
ggcaaccttgcaagcataaatcgcttaggtctgcgatacaatagattgtcagccatcccc
agaacattagccaaatgtcgagaactggaagagctaaaccttgaaaacaacaacatttcg
gtgttgccagagggcctactgtcaagtttagtcaacttgactagtctaacactggcgagg
aactgcttccagtcgtaccctgtgggtggaccgtcccagttctccaccatctattccctc
aacatggagcacaaccgcatcaacaagatcccctttggcatcttctccagggccaaagtc
ttaagcaagcttaacatgaaggacaaccagttaacgtctctgccgttggactttggcacg
tggactagcatggttgagcttaacctggcaaccaatcagctgacaaagatcccagaggac
gtctgtggcttagtttctttggaggtgttaatactgtccaataatctcctcaagaagtta
ccacatggtattgggaatttgagaaagctacgggagcttgacttggaggaaaacaaattg
gaatctctacctaatgaaattgcttatctaaaagatatacagaaattggtgttgacaaat
aatcagctgaccacgttacccagaggcatcggccacctcaccaacctgacccatcttggt
ttgggggagaaccttctgcaacacctcccagaggagataggtacactggagaacctggag
gaactgtacctcaacgacaatcccaacctgcacagcctaccgttcgagctggccctctgc
agcaagctgtccatcatgagcatcgagaactgtcccctcagccacctgccgccccagata
gtcgcggggggcccctccttcatcatccaattcctcaagatgcagggaccataccgtgcc
atggtctga
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