Clinocottus analis (woolly sculpin): 137795271
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Entry
137795271 CDS
T10471
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana02010
ABC transporters
cana04148
Efferocytosis
Brite
Transporters [BR:
cana02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
137795271
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GFIT
Other DBs
NCBI-GeneID:
137795271
NCBI-ProteinID:
XP_068448746
LinkDB
All DBs
Position
Unknown
AA seq
2268 aa
AA seq
DB search
MSFSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRIHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRNPTPGESPGVVGNFNDSIISRLFNDAKKILRYSQNDK
SYEGYKGLLRALRKLQKNTAGFKLKDFLQDDETLSHFLHHNASLPRHALKQIVEADVNLE
KVLTKGFGFHLRDLCNTTPLEEFVHIADRNVSRLTQEIICKSSSDWLDKAQSHFLSNLDF
FKPIRKDVRSDPKVVQEVSAATDNLLESLGALAVELASMKSWKDMRKEILYLTANATGSP
NQMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNHGNSSDSDPLAAYDNSSTPYC
NNMMRSLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIHEVNKTFQEFGVLRDLGGM
WEEMRPKFWNFMENGEEMDMVRTMLQNNASAAFFNAQLSGTEWRVSDVSAFLMKVSEDQR
PAGSAYTWREVFNESDQAIQTISRFMECVNLDKLEPVANEERLVNKSMGLLNNQKFWAGI
VFPDIAHGDSTDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFSY
LQDVIEHGIIRAITGTKQKTGVYIQQMPYPCYVDDMFLRVMSRSMPLFMTLAWMYSVAII
IKGVVYEKEARLKETMRIMGLNNGTLWLSWFISSLIPLLISASLLVLLLKMGNLLPYSDP
GVVFLFLGSFGIVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYIGFGA
KVIVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLASPLEEDSYNLTTSISLMLFDAVLY
GIMTWYIESVFPGQYGIPRPWYFPFTKTYWCGEKENTNISTPLSKKGNAEAVCIEEEPSH
IEPGVYIENLVKVYSHGKKLAIDGLSLRFYKGQITSFLGHNGAGKTTTMSILTGLFPPTS
GTAYIHGKDIRSELSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLPEEKVKAEMEQ
IVNDVGLPHKRDSRTSTLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLL
LKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDY
DLTLQSCRNSASTVSYNKKPEKQDTVSESSSDAGLGSEPESETTTIDVSLISNVIFKHVH
EARLVEDVGHEITYILPYQSAKDGAFVELFHELDDRLTDLGISSYGISDTSLEEIFLKVA
EDSGVDAVELSDGVVPTRTRRHHAFGDHQSCLKPFTEDDFDFNDSEESRETDWLSGTAGK
GSFQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKY
PSLTLDHSMYGEQFAFISNDIPEDPHINKLLEALTGNPGFGTRCMEGQPIPETPCTTIED
EWSAPEVSQSVRDMFEKGNWSMEDPSPMCECSCGGRKRMLPECPASAGGLPPPQRKISEK
DTLQNLTGRNVSDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSSEFMAHTEDLDDA
IAQLIKRFRLERGTAADRFFNSLSGFIQGLDTKNNVKIWFNNKGWHSIGSFLNVMNNGIL
RASLQADQDPAKFGITGANHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFVV
FLIQERVNKAKHMQFISGVQPLLYWLANFVWDMCNYIVPATLVIIIFMCFQQDAYVSSTN
LPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGSN
EIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNLF
AMAIEGVIFFVITVLIQYHFFFKSRSSTSHLKPIGEEDEDVARERQRILSGGGKSDILEL
RQLTKIYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTGGEAYLAG
KSVTTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIRKLGL
VKYVDKSAGSYSGGNMRKLSTAIALIGGPPVVFLDEPTTGMDPKARRALWNAILSIIKEG
RSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGPDPDLRP
VMGFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFALLSKNKEDLSIEDYSVSQTTLD
QVFVNFAKDQSDEDHLREAHLNKRDAVVVDISPLNSFLTDDKSRESCV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctccactcaactgggtttactgctttggaagaacttcacttatcgacggaga
caaactatccagctgctgattgagatcatctggcctttgttcatcttcttcatcctgatc
tcggtccggatacattatccaccctacgagcaacatgaatgccatttccctaacaaggcc
atgccctcggcaggtaccctgccctgggtgcaaggcatcatctgcaacgccaacaacccc
tgtttccgcaatcctacccctggcgagagtcccggggtggtggggaatttcaatgattct
ataatctcccgtctgttcaatgatgccaagaagatcctgcgctactctcagaatgataaa
agctacgagggctacaaggggctgctgagggccctcaggaagctgcagaagaacactgct
ggtttcaagctgaaggactttttgcaagacgatgagacgctttcccacttcctgcaccac
aacgcctctcttccccgtcacgcgctgaaacagatagtggaagctgacgtcaatctggag
aaggtgctgactaaaggcttcggtttccatctccgagacctctgtaacaccacgccgctg
gaggagtttgtccacatcgccgaccgcaacgtgtcccgtctgactcaagaaatcatttgc
aagtcctccagcgattggctagacaaggcccagagccacttcctctccaacttggacttt
ttcaaacccattcggaaggatgtgaggtcggaccccaaagtcgttcaggaagtctcagct
gcaaccgacaatcttctggagagcctgggagcattggcggtggagctggccagtatgaaa
agctggaaagacatgcgtaaggagatcctgtatctgactgcaaacgccactggctctcca
aaccagatgtaccaggctgtgtcacgtatcgtctgcggacaccccgagggaggcggcctc
aaaatcaagtctctcaactggtatgaggacaataactacaaggcccttttcggaaaccat
ggcaacagcagcgacagtgatcccctcgccgcttacgacaattcttccactccctactgt
aacaacatgatgcggagcctggagtccagccccatttccaggatgatctggagagctctg
aagcctctgctcatggggaagatcctgtacactccagacactcccgccacacagagaatc
atccatgaggttaataagaccttccaggagttcggtgtgttgagggacctcggagggatg
tgggaggagatgaggcccaaattctggaacttcatggagaatggcgaggaaatggacatg
gtcaggacgatgctccagaataacgccagtgccgcgttctttaatgcccagctcagtggg
actgagtggcgtgtgtccgacgtgtcggccttcctgatgaaagtctcagaggaccaaaga
cctgcaggatctgcttatacctggagagaggtcttcaatgaaagtgaccaggccatccag
accatctctcgcttcatggagtgtgtgaacctggacaagctggagcctgttgctaatgag
gagagactggtcaacaagtccatgggtctcctgaacaaccagaagttctgggctggaatc
gtgtttcctgacatcgcccatggcgacagcactgacctgcctcccaacgtcaactataag
atccggatggacattgataacgtggagaggacaaacaagattaaagacggctattgggac
cccggtcccagggcagaccccttcgaggacctgcgatatgtctggggcggattttcttac
ctgcaggacgtcatcgagcatggaatcatcagagccatcactggcaccaagcagaaaacg
ggcgtctacatccagcagatgccctacccctgctatgttgatgacatgttcctgcgggtg
atgagccggtccatgcctctcttcatgaccctggcgtggatgtactcagtagccatcatc
atcaagggcgtagtgtacgagaaggaggctcggctcaaagagaccatgaggatcatgggg
ctgaacaacggcactttgtggctcagctggttcatcagcagcttgatcccgctcctgatc
agcgccagcttgctggtgctgttattgaagatgggaaacctgctgccttacagcgaccca
ggcgtcgtgttccttttcctgggatccttcggcattgtaaccatcatgcagtgcttcctc
atcagcactctgttctctcgggccaacttggcagctgcctgcggtggcatcatatacttc
acgctctacctgccctacgtgctgtgtgtggcctggcaagactacattggctttggagca
aaagtcatagtgagtctcttgtctcctgtggcgtttggtttcggctgtgagtactttgcc
ctgtttgaggagcaaggggtgggcatccagtggtccaaccttctggccagccctttggaa
gaggacagctacaacctgactacctctatctccctcatgctgtttgacgcggtgctctac
ggaataatgacctggtatatcgaatctgtgttccctggtcagtatgggatccccaggcct
tggtacttccccttcactaagacgtactggtgtggagagaaagagaacaccaacatctcc
accccgctgtcgaagaagggcaatgctgaagctgtgtgtatcgaggaggagcccagccac
attgagccaggtgtttacatcgagaatctggtgaaggtctacagccatggaaaaaagctg
gctatagacggactgtccctgaggttctataaaggacagataacctcttttctcggccat
aatggagctggcaagaccacaaccatgtcaatcctgacagggttgttcccacccacatct
ggcacagcctacatccacggaaaggacatccggagtgaactcagcaccatccgtcagaat
ctgggcgtctgcccccagcacaacgtacttttcagcatgctgacggtggaggaacacatc
tggttctacgcccgtctgaaggggctgccagaggagaaggtgaaggccgagatggaacaa
attgtgaacgatgtcggactgcctcacaaacgagattcccgcaccagcacgctctccggt
gggatgcagaggaaactgtcagtggctctggcttttgtcgggggctcaaaggttgtgatc
ctggatgaacctaccgccggagtcgatccctacgcacgcagaggcatctgggacctgctg
cttaaatacagacaaggccgcaccatcatcctgtccactcatcacatggacgaggccgac
atcctgggtgaccgcattgcaatcatttctcacggcaagctgtgctgcgtgggatcctcg
ctcttcctgaagacccaactgggcacgggctactatctgactctggtcaagagggactac
gacttgacacttcagtcctgcaggaattctgccagcaccgtgtcctacaacaagaagcca
gagaagcaggacactgtatcagagagcagttcagatgctggtctgggcagcgaaccagag
agcgaaaccaccactattgatgtgtccctcatctccaacgtaatattcaagcatgtccac
gaggctcgcctggttgaggacgttggccatgaaatcacctatatcttgccctatcagtca
gctaaagacggagcctttgtagagctcttccacgagctggatgacagacttaccgacctg
ggaatatccagctatggaatatctgatacctctctggaggagattttcttgaaagtggct
gaggacagtggagtagatgctgttgagctctcagatggagtcgtgccgaccaggactcgt
cgccatcatgcatttggagaccaccagagctgcctgaagcccttcaccgaggacgacttt
gatttcaatgactccgaagaatcccgagagaccgactggctcagtggaacagctggcaaa
ggctcgttccaggtcaagggctggagtctgaagaggcagcagttcgtcgcactactctgg
aaacgattcctctacgctcggcgctccaggaaaggcttctttgctcagattgttcttccg
gcagtgtttgtgtgtatcgccctggtgttcagcctgattgtccctccgtttgggaagtac
ccaagtctgactctggatcacagcatgtacggggaacagtttgccttcatcagtaatgac
atacctgaggaccctcacatcaacaaactactggaagctctgacaggaaacccaggattt
ggaacgcgttgcatggaaggacaacctataccggagaccccctgcaccacgatagaggat
gagtggtcggccccggaagtctctcagagtgtgagagacatgttcgaaaaaggcaactgg
tcgatggaggatccctctcccatgtgtgagtgcagctgtggcggacgtaagaggatgctt
cctgaatgtcccgctagcgccgggggacttccaccacctcagaggaaaatcagtgaaaaa
gacactcttcagaatttgactggccgaaacgtctctgactatctggttaaaacctacgct
caaatcattggcaagagcctaaagaacaagatttgggtcaacgagttcagatacggggga
ttctcattgggcgccaggagttcggagttcatggcccacactgaagaccttgatgatgcc
atcgctcaactgatcaagcgtttccgtctggagagaggaactgcagcggatcgtttcttt
aacagtctctccggttttatacaagggttggacaccaagaataatgtcaagatctggttc
aacaacaagggctggcacagcatcggctctttcctcaacgtgatgaacaacggcatcctg
cgggcgagtctgcaagccgaccaagaccccgcaaagttcggcatcactggcgccaatcac
ccgctcaacctcactaaggagcagctgtcacaggtcgcattgatgacgacgtctgtagat
gtgctggtttccatctgcgtgatcttcgccatgtcctttgtccctgccagttttgtggtc
ttcctcatccaggagagggtgaacaaggccaaacatatgcagtttatcagcggagtgcag
cctttactctactggctggccaactttgtctgggacatgtgtaactacatcgtcccagcc
acactggtcatcattatcttcatgtgtttccaacaagacgcctacgtgtcctccaccaat
ctgcccgtgctggcgctgctgctgctgctctacggatggtcgatcacccctctgatgtac
ccagcctcgttcttcttcaagatccccagcacggcctacgtggttctgaccagcgttaac
atactgatcgggatcaacggcagcgtctccacatttgtactggagctgtttggaagcaat
gaaatcggtggcatcaacgacatcctgaagaacgtgttcctcatcttccctcacttctgt
ctgggccgaggactgattgacatggttaagaatcaggcaatggcagacgctttggagaga
tttggtgaaaaccggttccgctcccctctggcctgggacatggtgggaaagaacctgttt
gcaatggccatcgagggcgtcatcttcttcgtaatcaccgtcctcattcagtaccacttt
ttcttcaagtccaggtcatccaccagtcacctgaaacctattggagaagaagacgaggac
gtggccagagagcgacagaggatcctgagcggaggaggaaagtcagacatcctggagctc
agacagctcaccaagatttacaagaggaaacagaagccggcagtagaccgactctgtgtt
ggcatcccccctggagagtgctttggtttgctgggggtgaatggggcagggaaaaccagc
acctttaaaatgctgacaggagactctgtggtcaccggcggagaggcttacctggctggc
aagagtgtaacgacagagatcgatgaggtgcatcagaacatgggctactgtcctcagttt
gatgccatcaacgacctgctgaccggccgagagcacctcgagttttacgccatcctgaga
ggagtgcctgagaaggaagtctgtgaggtggcagagtggggcatccgaaagctgggtttg
gtcaagtatgtggacaaatcagccggcagctacagcggaggaaacatgaggaaactgtct
actgccatcgctctcataggaggaccacctgtagtctttctggatgaaccgacaacaggc
atggatccgaaagcccgccgtgctctgtggaacgcaatcctgagcatcatcaaggaggga
cgatctgttgtcctgacctctcacagcatggaggagtgtgaggcactttgcaccagaatg
gccatcatggtcaacggcaggttccgctgtctgggcagtgtgcagcatctcaaaaacagg
ttcggcgatggctacacaatcatcctgcgggtggccggcccggacccagaccttcggccg
gtgatggggttcatcgagcgggagctgcctggcagcacgctgaaggagaaacaccgcaac
atgctgcaataccagctgccctcctccctcacctccctcgcccgcatcttcgccctgctc
tctaagaacaaggaggacctcagcatagaggactactccgtctcacagacaactttagac
caagtgtttgtaaatttcgccaaggaccaaagtgatgaggaccatttgagagaggcccat
ctgaacaaacgggacgctgtggtagtggacatttccccgcttaactctttcctcacggac
gacaagtccagggagagctgtgtctga
DBGET
integrated database retrieval system
