KEGG   Clinocottus analis (woolly sculpin): 137795319
Entry
137795319         CDS       T10471                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
cana  Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:cana00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cana03009]
    137795319 (wdr18)
Ribosome biogenesis [BR:cana03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    137795319 (wdr18)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_alt Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd EIF3I NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_WDR75_2nd Beta-prop_Nup120_160 Ge1_WD40 WDR54 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 137795319
NCBI-ProteinID: XP_068448800
LinkDB
Position
Unknown
AA seq 428 aa
MAAPLEVIVTSDSGSQLWNCTVFDLHSGSSLLSYRGGNSGARSLALLSGEHLLSAQQGKN
VINMWEIQRKDQLQQKMVCPGLVTCLTASPSGLFLAAGVAEAVYLWEVSTGKLLSVLSRH
YQDVTCLKFTDDSSHFVSGGKDNLALVWRLSSVIQLDSSHTPEPRHVLSRHSLPITDLHC
GLMGAQARVATASLDQTVKVWELASGALLLSVLFDVEIMSVTFDPCEYFLFCGGSDGNIF
QVSLCSQSLSRDKSFQSDNDGNQVFKGHKNLVTCLSVSMDGTLLLSGSHDETVRLWDVQS
KQSIRCLAHKGPVTNAIIVAAPANMFLPDSRPAVPLPRFSRHLHAPEGGESGEVCVRLGL
YAQEDEQTYLQKADRLQCLMNAVTDKNLFGDGENTKVRVSELEEEVQTLKKVNKDLYDFS
SQLLTKPT
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggcggcccctctggaggtgatcgtgaccagcgactccggctcgcagctgtggaactgc
accgtgttcgacctgcacagcggctcctcgctgctgtcctaccgcggcggcaacagcggc
gcgcgcagcctggcgctgctcagcggggagcacctgctgtctgcgcaacagggcaagaac
gtcatcaacatgtgggagatccagaggaaggaccagctgcagcagaagatggtgtgtccc
ggtctcgtcacctgtctgactgcctcccccagcggactcttccttgctgctggagtcgcg
gaggccgtttacctgtgggaggtgtccacaggtaagctgctgtctgttctcagtcgtcac
tatcaggatgtcacctgtctgaagttcacagacgacagcagccattttgtttctggagga
aaagacaaccttgctctggtgtggcgcctgtccagtgtgatccagctggattcaagccac
acccctgagccgcgtcacgtgctgtcccgtcactctctaccaatcacagacctgcactgt
ggcctgatgggagctcaggcccgagtggccaccgcctccttagaccagactgtcaaggtg
tgggagttggcttcaggtgctctgctcctgtccgtcctgtttgatgtggagatcatgtct
gtgacctttgacccctgcgagtacttccttttctgtggaggcagtgacggaaacatcttc
caggtgtctctgtgcagccagagtctcagtcgggacaaatcattccagtcggacaacgac
gggaaccaggtcttcaaaggacacaagaacttggtgacgtgtctctctgtgtccatggac
gggactctcctcctctcggggtcacatgatgagacggttcgactctgggacgtccaaagc
aaacagagcatccgctgccttgcccacaaaggtcctgtgacgaatgccatcatcgtggcg
gctccagcgaacatgtttctgccagacagccggcccgccgtccctctgccgcgcttcagc
cgacacctgcacgcccctgagggcggtgagtcgggggaggtgtgcgtccgcttagggctt
tatgcacaggaggatgagcagacgtacctgcaaaaagctgataggctccaatgtttgatg
aacgctgtgactgacaagaacctgttcggtgacggagagaacacgaaggttcgagtgtcg
gagctcgaggaggaagttcagactctgaagaaggtcaacaaagatctgtacgacttctcc
agccagctgctcaccaagcccacatag

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