Clinocottus analis (woolly sculpin): 137795652
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Entry
137795652 CDS
T10471
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137795652 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cana03021
]
137795652 (taf4b)
03036 Chromosome and associated proteins [BR:
cana03036
]
137795652 (taf4b)
Transcription machinery [BR:
cana03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
137795652 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
137795652 (taf4b)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
137795652 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
DUF3106
Motif
Other DBs
NCBI-GeneID:
137795652
NCBI-ProteinID:
XP_068449380
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MATNKVVLEAQKLESCGAAGSGDTAIQVKILQVQTKCAPSAALQHPATAAGVSKGVPVSA
LPKAIPAGHPAGHLHQPTSSTVTVPGRQTSSFMVVAKVSTAGGGGQPQATKPALSQLASM
NQAPTPGRTVVITVPRAASPQTVTVPPRLPKTASSQLPANLQIPPGMMLIRSDSGQLMLV
SQQALAQAQQAPRGVSGQAPRILVPQVSAAAGNKTNEKVTVIRMAAPPSFHPAPVQKTAV
LKGIGVTPKPAVVQTFSGVSERGSQPRIQALATETKKESPITINQATLDSVKKCKNFLVT
LIKLASSDSRSANMANNVRGLVRSLLEGKLEAEEFTERLYQALKSTPQPCLVPFLKKSLP
AVRRLTADPQLFIQQASTSAVNLKKSPSTVTAPPHTASPQVIQQPPAGTLRPGMTTLVQS
RNYILKSSRPAPKHTEVQSGKPFTGTLSLKQPITQEPRRSATFAFKDSSGSYREDDDIND
VASMAGVNLREENAQILTTVVGSVVQSCQDQPFLSPAPVLSRILCTGRALGVTDVGPEVV
SLVSHATQECLRELLEKLTVVAEHRKAALKEDLWHTKVSDVRSQLRFLEEVESLKKKRMD
EEERERLLRLARSRSHTEDPQHQQLKQRAKELQQMEEAQLQQREANLTALAAIGPRKKRP
LEQPESQVTLLPRPGVQRMTRVLLRDLLVCMEQDRFLCHSLSLYRAML
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaataaagtggttcttgaagcccaaaagctggaatcctgtggggctgcaggg
agcggtgacaccgccattcaagtcaagatcctacaggtccagactaaatgtgcacccagc
gctgctctgcagcacccagccactgctgcaggcgtctccaaaggggtgccggtctctgcc
ctacctaaagccatcccagctggccatccagctggccatctccaccagcccacctcctct
accgttacagtcccagggcgtcagacttcctctttcatggtagtagcaaaggtgtccacc
gcaggaggaggaggccaaccacaggccacaaaaccagccctgagccagttggcctccatg
aaccaggccccaacccccggaaggacagtggtgataaccgtaccgagggcagcgagccca
cagactgtcactgtgcccccccggctgccaaagactgcctcctcacagctcccagctaat
ctccagataccaccaggtatgatgttgatccgcagtgacagtggtcagctgatgctcgta
tcccagcaggctttggcacaggctcagcaggcaccaagaggggtcagtggtcaagcacct
agaatactggtcccacaggtatctgcagcagcaggaaataaaactaatgagaaggtaacc
gtgatcaggatggccgcccctcccagtttccacccagcaccagtgcagaagacggctgtt
ctaaaggggatcggtgtgactcccaaaccagctgtagttcagaccttcagcggtgtgtct
gaacgggggagccagcctcgcattcaggcgcttgccacagaaaccaaaaaggagtcacca
atcaccattaatcaggcgactctggatagtgtgaagaagtgcaagaacttcctggtgacc
ctgatcaagctggcctccagtgactccaggtctgccaacatggctaataacgtcagagga
ctggtccggagtctgctggaaggaaagctagaagcagaggagtttacagagcggctttac
caagcgctgaagtccactccacagccctgcttggtgcctttcctcaagaaaagtcttccc
gcagtgcgccgcctcactgcagacccacagttattcattcaacaggcttcaacgtctgcg
gtcaacctcaagaagtcgcccagcaccgtcacagctcctccccacactgccagcccgcag
gttatccagcagcctccagcagggactctgagaccgggtatgacgacattagtccagtcc
agaaattacatattgaagagcagcagacccgcccccaagcacacagaggtccagtcggga
aaaccctttacagggacgttgtcgttgaagcagcctatcactcaggagccacgtcgttct
gctacatttgcattcaaggacagttcaggatcatacagagaggacgatgacattaacgac
gtcgcctccatggctggagtcaacctgagagaggagaatgctcagatcttgaccacggtg
gtgggctccgtggtgcagtcgtgccaggaccagcccttcctctcaccagccccagtgctc
agccgaatcctgtgtacaggacgggcactgggagtgacggatgtcggtccagaggtggtg
tctctggtgtctcatgccacccaggagtgtctccgtgagctgctggagaagctcactgtg
gtggcagagcaccgcaaggctgccctgaaggaggacttgtggcataccaaagtgagtgat
gtgcgatcccagcttcgctttctggaggaagtggagagtttaaagaagaagaggatggat
gaagaggagcgagagagactgctgcgtttggccagaagtcgctcacacacagaggatcca
cagcatcagcagctcaagcaaagagccaaagagctgcagcagatggaagaagctcagctg
cagcagcgagaagccaacctcacggctctggcagccattgggcctcgcaagaagagacct
ctggagcagccggagagccaggtgaccctgctgcccagaccgggtgttcagaggatgacc
cgggtcctgctgagggatctgctggtgtgtatggagcaggaccgcttcctgtgccactcc
ctttccctgtacagagccatgctctga
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integrated database retrieval system
