Clinocottus analis (woolly sculpin): 137795949
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Entry
137795949 CDS
T10471
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
KO
K14962
COMPASS component SWD2
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137795949 (wdr82)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137795949 (wdr82)
03036 Chromosome and associated proteins [BR:
cana03036
]
137795949 (wdr82)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
137795949 (wdr82)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
137795949 (wdr82)
COMPASS/SET1 complex (yeast)
137795949 (wdr82)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
PEP5_VPS11_N
WD_LRWD1
Beta-prop_SCAP
Beta-prop_HPS5
VPS8_N
MinC_C
Motif
Other DBs
NCBI-GeneID:
137795949
NCBI-ProteinID:
XP_068449646
LinkDB
All DBs
Position
Unknown
AA seq
313 aa
AA seq
DB search
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGESIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVTSLSMSPVDD
TFISGSSDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRILDAFKGAVVHSFGGYNNSKC
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgacggacaatgtgctgcggagcttcagagttgctaaggtgttccgggaaaac
tcagacaaaatcaactgcttcgatttcagttcaaatggagaatctatcatttccagcagc
gacgacgactccttagtcttgtacgactgccaagagggaaaacctaagaggactctctat
agcaaaaagtatggagtggatctgatcaggtacacacatgctgcaaacactgtggtctac
agctccaacaaaatcgatgatactatccgatacctgtctcttcatgacaacaaatacatc
cgctactttcctgggcatagcaaaagagttacatcactctccatgtctcctgtggacgac
acatttatttctggctcttcagataaaacaatcagattgtgggatttgcggtcacctaac
tgccagggtttaatgcacctgcaggggaagccagtgtgctcctttgatccagagggttta
atttttgctgcaggaataaattccgagatggttaaactttatgatctgcggtcgtttgac
aaaggtccttttgcaaccttcaagcttcagtacgaccggacgtgcgagtggacagggctc
aagtttagcaatgacggaaaactcattcttctttcgacaaatggcggagcccttcgtatc
ttagatgctttcaaaggtgctgtggtacattcctttgggggctacaataacagtaaatgt
gtaacactggaggcgtcattcactccggattcacagtttgttatgatcggctctgaggac
ggaaagatccacgtgtggaatgcggagagcggcatgaaggtggctttattagacgggaag
cacacgggaccgataacctgcctgcagttcaaccccaagttcatgacgtttgcaagtgcc
tgctccaacatggcattctggctcccgaccatcgatgactga
DBGET
integrated database retrieval system