Clinocottus analis (woolly sculpin): 137796004
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Entry
137796004 CDS
T10471
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cana04121
]
137796004 (rnf20)
Enzymes [BR:
cana01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137796004 (rnf20)
Ubiquitin system [BR:
cana04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
137796004 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
CC_Bre1
zf-RING_UBOX
HAT1_C
zf-RING_5
BRE1
zf-RING_2
zf-rbx1
SOGA
Motif
Other DBs
NCBI-GeneID:
137796004
NCBI-ProteinID:
XP_068449734
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MSGQKRPADPCGPSSAGAPPEKRRERDGEDGAPGVSAAAGGSTAVETVIKLGGVSNSEEQ
DIKALQAKNRKLGESLDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQFDENVQL
TIRRYDQASSEPEKSLASEGRNLKPDTPEPDGDSNQERAKDRSHQGETTNSFLATLASSS
SEEMEAELQERVESSQKQARHVVEIYECLKSTVDQLKAELNAGAEGTLWQTASKLNSLLV
SENKRLQQLTEDLKQKHSHMTSESRPLGRAANKADQRVSELQVLIEELQWDMEKIRRREN
RLNAHLTEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSDMEENTELADNRFVELQ
KLQQDLQSVHQENNNMKVELLSRAAVMVKETAEYRCLQSQFSVLYNESLILKGQLDETRA
RLNTTRTARLRQLEHMENDEVALQRKVRTEVFQLEDTLAQVRKEYEMLRIEFEQTLAANE
QAGPINREMRHLISTLQTHNQQMKGEVVKYKIRLRESQTELNQVRASKGNAILQSQSSTE
MDVKDETTSPLIPAISGEPVVKTEPDTGSSTPSSTGASVKTEPGVESEATVKDEEKEEKK
EKEEKKEKDVIKKEEKDREKEKERERPTRGGSSSAIKEEKEKPGSSSQPEESAGERLSVV
QGSKRKEMEQLKIVRAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKSKSEGE
ELRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEEDALLSEMDVT
GQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQV
DAQLQVVRKLEEKERLLQGTISTAERELALRTQALDMNKRKALESALLSEEVRTQLEQVQ
QRLNLVREEVIENSISREKESFNARRAQEDISKLRGKIEKAKKPAEKISNGDDILNEEIN
DYKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYI
G
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggacagaagcgtcctgcggacccatgtggcccctcgtccgccggtgctcccccg
gagaagcgtcgggagagggacggagaggacggagctcccggtgtcagcgccgctgccggg
ggaagcacagcggtggagactgtcatcaaactgggaggagtgtccaactcagaagaacaa
gacatcaaagctctccaggctaaaaaccgaaaattgggagaatctcttgatcaaagacag
gtgattgaggatgaattgcgagagcgaattgagagattggagacccgtcaggccactgat
gatgccagcctgctgatcctcaacagatactggaaccagtttgatgaaaacgttcaactg
accatcaggcgttatgaccaagcaagcagcgaaccggagaaatctctcgcaagtgaggga
cggaacctcaagccagacactccagaacctgatggcgactccaaccaggagcgggctaag
gacagaagccaccagggagagacaaccaactctttcctggcaacgctggcgagcagcagc
agcgaggagatggaggctgaacttcaggagagagtggaatccagccagaagcaggcccgt
catgtggtggagatctatgaatgtctgaagagcacggtggaccaactgaaggcagagctg
aacgctggtgctgagggaactctatggcagacagcttccaaactaaattctctcctggtc
agtgaaaacaagcggctgcaacagctgactgaagacctgaagcagaagcacagtcacatg
acgagcgagtcccggcctctgggtcgtgctgctaacaaagcagaccagcgtgtcagtgag
ctgcaggttctgatcgaggagctccagtgggacatggagaagatccgccgcagagagaac
agactcaatgctcacctgaccgagatactggagagggtgaacagcaaaggctataaggtg
tgtggggaggccagcagcgtttgtgggaccatcactattaacaagagaaagtttgaagaa
atgaacagtgatatggaagaaaacactgagctggccgacaaccgctttgttgagctgcag
aagctccaacaggaccttcagagcgtgcaccaggagaacaacaacatgaaggtggagctg
ttgagtcgagcagccgttatggtaaaagagactgctgagtatcgctgccttcagtcgcag
ttttctgtgctctacaacgagtctctgattctcaagggtcaactcgatgagacgcgcgct
cgtctcaacactaccaggacagcaaggcttcgacagctggagcacatggagaatgatgag
gtggctttgcagaggaaggttcgtacagaagtctttcagctggaggacacgttggctcag
gtcaggaaggaatacgagatgttgcgcatcgaatttgaacagacacttgctgccaacgag
caagcaggtcctatcaacagggagatgcgtcacctgatcagcacgctacaaacccacaat
cagcaaatgaagggagaagtggtgaaatacaagatcagattgagagagtcacaaactgaa
ctgaaccaggtccgtgcttcaaagggcaatgccatccttcagtcccagtcaagcacagag
atggatgtgaaggatgagacaacctctcctttaatcccagccatttctggggaacctgtg
gtcaagacagagcctgacaccggttcctccacacccagcagtacaggggcctctgtgaaa
acagagcctggcgttgaatcggaagcaacagtaaaagatgaggagaaagaagagaagaaa
gagaaggaggaaaagaaagaaaaggatgttattaagaaagaggagaaagacagggagaag
gaaaaggagagagagaggccgactcgtggtggtagcagcagtgcgataaaggaggagaag
gagaaaccagggagcagcagccagcctgaggagtcagccggggagcgtctgtctgtggtc
caggggtcaaagaggaaggagatggagcagcttaagattgtccgagctgaactcaagaaa
gcgcaggagtcccagagggagatgaagttgctgctggacatgtaccgctcagcaccaaag
gagcagagggacaaagtccagctcatggctgcagagaagaagtccaagtcagagggagag
gagttgcggcagagactgagagagctggaagagagggagaggagggagggtaagaaaatg
gctgacgaagaggctctgagaaagatccgctctgtggaggagcagattgacatcctcaac
aagaagctctccatagcaaaacaggaggaggacgcgctgctgagcgagatggacgtgacg
ggccaggcttttgaggacatgcaggaacaaaacatccgtctgatgcaacagcttagagaa
aaagacgatgcaaactttaagttaatgagcgagcgaatcaagtccaaccagatccacaag
ctgctaaaagaggagaaggaggagctggccgaccaactacttactttaaaaactcaggtc
gatgcccagctgcaggtggtgaggaagcttgaggaaaaggaacgccttcttcagggcact
atcagcactgctgagagagagctggcacttcgaacacaagctttggacatgaataaacgc
aaggctctggagtctgctttgctgtctgaggaggtgcgaactcagctggagcaggttcag
cagaggctcaatctggtcagagaggaagtcatagagaacagcatctccagggagaaagag
tcttttaacgctcgacgagcacaggaggacatctccaaactaaggggtaagatcgagaag
gccaagaaaccagctgagaaaatcagcaatggagatgatatcctaaatgaagaaatcaat
gactacaaggcacgcttaacatgtccctgctgcaactctcgggtgaaggatgcagtactc
acaaagtgcttccacgtcttctgcttcgagtgcgttaagacacgttacgacacacgtcag
aggaagtgccccaagtgcaacgctgctttcggagcaaatgacttccaccgcatatacatc
ggctga
DBGET
integrated database retrieval system
