Clinocottus analis (woolly sculpin): 137796191
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Entry
137796191 CDS
T10471
Symbol
smpd4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana00600
Sphingolipid metabolism
cana01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
137796191 (smpd4)
Enzymes [BR:
cana01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
137796191 (smpd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
137796191
NCBI-ProteinID:
XP_068450059
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MAAPTLQQPSFLLANLKAESCTKPLQQRCQDLVKIIEEYPSKELHVVFPWLVESVFGSLD
GSIAGWNLRLLHSRCHEYNIVLEFLNPSGPMMKLVYKLQAEEYKYEIPVNYLPGPVKACI
QGGVLPECPLFHNKLQFPLTGLLTLNLALNPFEFFMFNFASCLVTPKSYPQGHHGSVADS
AYFVLVDAYLKYFLPSEGSVPPSPFSDSKCSVTAPSPRSSSVSFAGYGVHSPSLLKHHIF
HQPSVNADPAAQEIWRSETLLQMFVEIWLHHYSLEMYQKLQSPQVKLALLQYRLSMSSTP
CQPSAPPGSGTLHTYQDPFSPTEEHVLVVRLLVKHLHAFSNSLKPETLTASPSAHSSPLE
ELKRVVVQRFVQQKLYLFLQHCFGHWPLDASFRAVLETWLSYIQPWRYTGEPAGSQPDQN
RTVPDKWEPFVQENLLMFTKLFLVLLNRAVRTDLVNAKNALMVFRVAKVFAQPNLADMIQ
KGEQLFLEPEHVLHHRQPRGYLTPSQGGSFLSSRQRAVTDMAFRVKSHVYALEGQDCQYK
QMFGTELRGAVMKLIQIIAQARQTAKRISDHSSEAAAGGSLLSWFGMGSPDLNRNAFPGA
EHEESGECLKKTHEFLDKALENLCQIFKLNPGQLAQLLSGLNSSQDHGPGRLLPDCIMGE
NGPVLTDLGRQQIISGLRRFDIQYQGDPELQPIRSYENALLVRLFYRISSLLNERFGGHM
HALCSRPDLLGRLGRHYLSDPDSPAGNQPALQSPTLPSRRRRRPRLSLRPLASYRLLLML
LLGYAIGAVLALGPASTTLFILTGSVLYGLLAALIGDKMKTH
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgacgctacagcagcccagtttcctgctggccaacctcaaggcggagtcc
tgcaccaagccgctgcagcagcgctgccaggacctggtgaagatcatcgaggagtacccg
tcaaaggagctgcacgtggtgttcccctggctggtggagagcgtgttcggcagcttggac
ggcagcatcgccggctggaacctgcggctgctgcactcgcggtgccacgagtacaacatt
gtgctggagttcctgaaccccagcgggccaatgatgaagcttgtctacaagcttcaagca
gaagagtacaaatatgaaatacctgtcaattatctcccgggtcccgtgaaggcctgcatc
caggggggcgtcctcccagaatgccctctgttccacaacaagttgcagttccctctcacc
ggtctgctgacgctgaacctggctctcaaccctttcgagttcttcatgttcaacttcgcc
tcctgtctcgtcacgcccaagagctacccgcagggccaccacgggagcgtcgccgacagc
gcctactttgtgctcgtggacgcttacctgaagtacttcctgccgagtgaagggagcgtt
cctccttcacctttctctgactccaaatgctcggtcactgcaccttcgcccagatcttcc
agcgtgtcttttgctggttatggcgttcacagcccaagtctcctcaaacatcacatattc
catcagccgtcagtgaacgccgatccagccgcccaggagatctggaggtctgaaacactg
ctccagatgtttgtggagatctggctccatcactactccttagagatgtatcagaagctg
cagtcacctcaggtaaagctggcgctgctgcagtaccgcctcagcatgtccagcacgccg
tgccaaccctccgccccaccaggctctgggaccctccacacctaccaagatcccttcagc
ccgacggaggagcacgtcctggtggtgcgcctcctggtcaagcatctgcacgccttctcc
aacagcctgaagcccgagacgctgaccgcctcgccctcggcccacagcagtccgctggag
gagctcaagagggtggtggtgcagcgcttcgtgcagcagaagctctacctgtttctgcag
cattgcttcggccactggcccctggacgcctccttcagagcggtgctggagacgtggctg
agctacatccagccgtggagatacacgggggagcccgccggctcccagccggaccagaac
agaaccgtgccggacaagtgggagccgtttgttcaggagaacctgctgatgttcaccaag
ctcttcctggtgctgctaaaccgggccgtgaggacggatctggtgaatgccaagaacgcc
ctaatggtcttcagagtggccaaagtgttcgctcagcccaacctcgccgacatgatccag
aagggagagcagctgttcctggagccggagcacgtcctgcaccaccggcagccccgcggc
tacctgacgccaagccaaggcggcagcttcctgtcctcgcggcagcgggcggtgaccgac
atggcgttccgggtgaagagccacgtgtacgccctagagggccaggactgccagtacaag
cagatgttcggcaccgagctcagaggggcggtcatgaagctgatccagatcatcgcacaa
gccagacagacggccaaaaggatctcggatcactccagcgaggcggcggccggcggctcc
ctcttgtcctggttcgggatgggctccccggacctcaaccgcaacgcgttccccggggcc
gagcacgaggagagcggcgagtgcctgaagaagacccacgagttcctggacaaggctctg
gagaacctgtgccaaatattcaagctgaacccgggccagctagcccagctgctgtccggc
ctcaactcctctcaggaccacgggcctggcaggctgctgccagactgcatcatgggagag
aacgggccggttctgaccgacctgggccgccagcagatcataagtggactgaggaggttt
gacatccagtaccaaggcgacccggagcttcagccaatcaggagctacgagaacgctctg
ctggtccgcctcttctacaggatctcctctctgctcaatgagaggttcggcgggcacatg
cacgcgctgtgctctcgtccggacctcctgggtcgtctcggtcgtcactacttgtcggac
cctgactcgcctgcggggaaccagccggcactgcagagcccgacactgccgtcccgccgc
cgccgccgaccgcggctcagcctgcggccgctggcaagctaccggctgctgctgatgctg
ctgctcggctacgcgatcggcgccgtgctggccttaggccccgcctccaccacgctgttc
atcctcaccgggtccgtcctgtacggactcctcgcggcgctgatcggagacaagatgaag
acgcactaa
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