Clinocottus analis (woolly sculpin): 137796221
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Entry
137796221 CDS
T10471
Name
(RefSeq) probable nuclear hormone receptor HR38
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
137796221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137796221
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cana03310
]
137796221
Transcription factors [BR:
cana03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
137796221
Nuclear receptors [BR:
cana03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
137796221
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
TFIIA
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
137796221
NCBI-ProteinID:
XP_068450106
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Position
Unknown
AA seq
610 aa
AA seq
DB search
MPCVQTQYASLPHDNYFSSEFLNPDLSAKLVMDIGGQNEQLSTSSLPSINTLVGNGYMGE
FDAYSCKITTSPPTSSFGHAAGAESSCPQMQSQAFKLDDLQVYGCYPGSFALSCLDETLS
SCGSDYYGSPVYAAASPPTSGFQAQSAPLWDSPFSPYPSAPPSSMADKGAMAQQLSFFTF
GSPAPEQHSPLGQHQDAQPGHDDHFFLQQQQQQQQQQQQQQQQQQQQQQQQHVSPHHCPP
MSLEHGPLESPRIVEGAMASPKNHNSGSIEGRCAVCGDNASCQHYGVRTCEGCKGFFKRT
VQKNAKYVCLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPK
TVAEASSTTPNVNIIASLVRAHLDSNPTIGKLDYSKYQETVVNLKEKEEAGDIQQFYDLL
TGALDVIRNWAETIPGFTEFCTEDQELLLESAFVELFILRLAYRSNPEKNKLIFCNGLVL
HRLQCVRSFGDWIDSIMDFSHSLHRMNLDVSLFSCLAALVIITDRHGLKEPKRVEDFQTH
LITCLREHVSGSGSEASRTQPNYLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIV
EKIFMDTLPF
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtgtacaaacccagtatgcttccctgccgcatgacaactacttcagctctgag
ttcttaaatcctgacctcagtgccaaactggtgatggacatcggtggccaaaatgagcag
ctgtctacatcttcgttgcccagcatcaacaccttggtgggaaatggctacatgggggag
tttgatgcttattcctgcaagattaccacctcccctcccacctcttcattcggccacgcc
gcgggagctgaaagctcctgccctcagatgcaaagccaagccttcaagctggatgatctt
caggtgtacggctgttacccaggttcctttgcactgagctgcctcgatgaaacactatcg
tcctgcggctccgactactatggcagcccggtttatgccgccgcttcccctccgacgtca
ggctttcaggcccagtctgcacctttgtgggattcccctttcagcccttacccctcagcg
ccgccgtcctccatggcagataaaggtgccatggcccagcagctctcctttttcaccttc
ggcagccccgcaccagagcagcattctcccctcgggcagcatcaggacgctcagccgggc
cacgatgaccatttcttcctgcagcagcagcagcagcagcagcagcagcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcatgtctctccacatcattgtcctccc
atgtccctggagcacggacccctggaaagccccaggatagtggagggagccatggcctct
ccaaaaaatcacaactccggatccatcgagggccgctgcgcagtttgtggcgacaacgca
tcctgtcagcactatggcgtccgcacctgtgagggctgcaaagggttcttcaagcgaact
gtacagaaaaatgcaaagtacgtgtgcctcgccaataaagactgtcctgtggacaagagg
aggagaaaccgctgccagttctgccgtttccagaaatgtctggccgtgggaatggtcaaa
gaagttgttcgcacagacagcctcaaaggccgacggggtcgccttccctccaagcctaag
actgtggccgaggcttcatccacaacccccaacgtcaacatcatagcctctcttgtcaga
gctcatctggactcaaaccccaccattggaaagctcgactactccaagtaccaggagaca
gtcgtcaacctgaaagaaaaggaggaagccggtgacatccagcagttttacgacttgctg
actggcgctttggatgtaattcgaaactgggctgaaaccatcccgggattcaccgagttc
tgcacagaggaccaggagctgctcctcgaatcagcttttgttgaactcttcattctgcga
ctcgcctacaggtcgaatccagagaagaacaagttgatcttctgtaacggtttggtcctc
caccgactgcagtgcgttcgcagttttggggactggattgactccatcatggatttctcc
cacagccttcaccgcatgaatttagacgtctccttgttttcctgtctcgcagcgttagtt
ataatcaccgatcgccacggcctcaaagagcccaaacgggtggaggactttcagactcat
ctcatcacatgtttgagggaacatgtgagcggaagcggctcagaagcgagtcggacccag
cccaactatctttctcgacttctgggcaaactccccgaactgaggactctgtgcacgcag
ggcctgcagcgcatcttctacctgaagctagaggacctggtccctcctccaccgatagtg
gaaaaaatctttatggatactctgccattctga
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