Clinocottus analis (woolly sculpin): 137796283
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Entry
137796283 CDS
T10471
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cana03041
]
137796283
Spliceosome [BR:
cana03041
]
Common components
Common spliceosomal components
General mRNP proteins
137796283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_5
RRM_7
Macoilin
PRD1_P5_spike_N
Motif
Other DBs
NCBI-GeneID:
137796283
NCBI-ProteinID:
XP_068450228
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MADDLDIEAMLEAPFRKEDLKNQSPNGPEERTKRKKRSRDRKRSRDKKRSRSRERKSSRS
RDTKRRSRSRERRSSRERGGRYRDHHQHRKRSKSKSPVRKEKSPLRQPVDNLTPEERDAR
TVFCMQLAARIRPRDLEDFFSSVGKVRDVRMISDRNSRKSKGIAYIEFVETNSVPLAIGL
TGQRLLGVPIIVQASQAEKNRAAAAAAAANNLQKGTSGPMRLYVGSLHFNITEEMLRGIF
EPFGRIESIQLMMDGDTGTSKGYGFITFADAECAKKALEQLNGFELAGRPMKVGNVTERN
DSFSSFLDSDELERSGIDLGTTGRLQLMARLAEGTGLQMPPAAQQALQMSGVIAFGAMAA
VSAAMNPTLNMNSGHMSLPSQPLATHCFQLSNMFNPKFEDVPGWEMDIQHDVIEECNKHG
GVVHIYIDKNSAEGNVYVKCPSIPAAMAAVNALHGRYFAGKMITAAYVPLPTYHNLFPES
AVTTLPLVPPPRR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgacctggacatcgaggccatgctggaggctccattcagaaaggaggaccta
aagaaccaaagccccaacggaccggaggaacgcacgaagaggaagaagcgcagccgcgac
aggaagcgcagccgcgacaagaaacgcagtcggagccgagagcgtaaaagcagccgcagc
cgagacaccaagaggagaagtcgcagcagagagcgtcgcagcagcagagagaggggcggg
cgctacagagaccaccaccagcaccgcaagcggtcaaagagtaagagccccgtcaggaag
gagaagagtcctctcaggcagcccgtcgataacctgactccagaggagcgggacgcccgg
acggtgttctgcatgcagctagccgccaggatacgacctcgagacctggaggatttcttc
tcttctgtcgggaaggtccgggacgtaaggatgatctcggacaggaactcccgcaagtcg
aagggcatcgcctacatcgagtttgtggagaccaactcggtccctctggccatcgggctg
acggggcaaaggctgctgggagttcccatcatcgtacaggcctcgcaggcagaaaagaac
cgagcagcagcagctgccgccgccgccaacaacctgcagaagggaacgtcgggaccgatg
aggctgtacgtcggctctctgcacttcaacatcacggaggagatgctgagagggatcttt
gagccgtttggacggattgagagcatccagctgatgatggacggcgacacaggaacctct
aaaggctacggcttcatcactttcgcagacgccgagtgcgctaagaaagctctggagcag
ctgaacggcttcgagctggcgggtcggcccatgaaggtcggcaacgtgacggagcggaac
gactccttctcctcgttcctcgacagcgacgagctggagcgcagcggcatcgacctcggg
accaccgggcgcctgcagctgatggcccggctcgccgagggtactggtctgcagatgcct
cccgctgctcagcaggctctgcagatgagcggagtcatcgctttcggagccatggccgcc
gtgtcagctgctatgaatccaaccctcaacatgaactctggacatatgagtcttccctct
cagccgctcgccacacactgcttccaactgtccaacatgttcaatcccaagtttgaggat
gttcctggttgggagatggatatccagcatgatgtcatcgaggagtgtaacaagcacgga
ggagtcgttcacatctacatcgacaagaactctgctgaggggaacgtttacgtcaagtgt
ccgtctatcccggccgccatggccgcggtcaatgctctccacggacgatactttgctggt
aagatgatcacggcggcctacgtccctttgcctacctaccacaacctgttcccggagtcc
gccgtcaccactctgccgctggtcccgcccccgcgacggtga
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