Clinocottus analis (woolly sculpin): 137796331
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Entry
137796331 CDS
T10471
Symbol
smarcc2
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137796331 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cana03021
]
137796331 (smarcc2)
03036 Chromosome and associated proteins [BR:
cana03036
]
137796331 (smarcc2)
Transcription machinery [BR:
cana03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137796331 (smarcc2)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137796331 (smarcc2)
PBAF complex
137796331 (smarcc2)
GBAF(ncBAF) complex
137796331 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
137796331
NCBI-ProteinID:
XP_068450314
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILASAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIFLSSDIEPKLLGKLKDIIKRHQGSVTEDKASSSHVVVP
IPTSLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIQASEIEAAVEDPPCPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEPEDPSKDLDEASPVPASEEGNPPKSN
NTKKDSDSTPVKGGTDMDEQEDESMETTGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQVHIHSQTQTQIKHAYMFWVVLHMSSHCAPLXTPATQQMMSFPDKVKEKPADLQ
NFGLRTDMYSKKTCSIKSKSTASSMREWTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQD
ECILHFLRLPIEDPYLEDHSSSLGPLAFQPVPFSQAGNPVMSSVAFLASVVDPRVASAAA
KSALEEFSRMKEEVPAALVEAHVRRVEEAARVSGRQDPLYGLEGSGIAGTGLEEGDRPDE
SSDESKSDSQPGEEKRETKDSKDGATEEEEKQAENGKKEEERGREAEGERETDKTESEIG
DGEKAKDGKEGTEDGQREAESEGERKAKVERDVGEGNLATAAASALAAAAVKAKHLAAVE
ERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQSFHMEQLK
YAEMRARQQHFQQIQHQQHSQTAGPHANQAAPAPAPPPPTASQQAPNTPAPQPAPSPAPP
ASASAPAPETQAPQGAHTSPPCPPGATPSTQSSSSSSTTPVLHEPTPPPAGETLHPSATV
QPPQ
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatacc
gtttctcagtttgataatgtccgcgtctggctgggaaagaattacaaaaagtacatccag
gccgagccccccaccaacaagtctctgtccagcctggtggtccagctgctccagttccag
gaggaggtgtttggtcgacatgtcagcaaccctccgctcaccaagctgccaatgaagtgt
tttctggactttaagtccggaggggctctctgccacatcctggcttctgcctataagttc
aagagtgaccagggatggcgcaggtttgacttccagaatccgtcgaggatggaccgaaat
gtggagatgttcatgaccattgagaagtccttagtgcaaaacaactgcctgagtaggccg
gtcatcttcctgagctctgacattgagccaaaactgctcgggaaactaaaagacatcata
aaaagacatcagggctcagtaactgaggacaaggcctccagctcccatgttgttgttcct
attcccactagcctggaggaagaggagtgggtgcgtccagtgatgaagagagataagcaa
gtgctcctccactggggatattttcctgacagttacgacacctggattcaagctagtgag
attgaagctgctgtggaggatcctccctgcccagaaaagcctaggaaggtccatgccaag
tggattttagacctggaccagtataacgagtggatgaacgaggaggactatgaagtgggc
gagggctgccctaagaggaaaagaatctcagccaagaccctgacagatgaggtgaccact
cctgatgagcggagggacaaaaagcccggcagtgctaagaagaggaagaggtcgccgtcg
ccatccccgacacctccgcctcaggagagcaagaagaagaataccaaaaaagggccaaca
accccgtacactaagtctaaacggggccaaagagaagaggaaccggaggaccctagtaaa
gatttggatgaagcgtcacctgttccagcatcggaagagggaaacccacctaaatcaaat
aacaccaagaaggactctgattcaactccagtgaagggaggaacagatatggacgagcaa
gaggatgagtccatggaaacaacaggcaaggaggaggaggaaggctctccaagcgtaaag
ggtgagccagtgaaaggctcggaccttcacgaggacaacgtgactgagcaaactcatcac
attattataccgagctacgctgcctggtttgactacaacagtgttcatgccattgagcgc
agagccctgccagagttttttaatgggaagaacaaatccaaaaccccagagatttacctg
gcgtacaggaacttcatgatcgacacataccggctgaaccctcaggaatatctgacgtcc
acggcctgtcgcaggaacttggcaggagacgtgtgcgcaatcatgagagtgcacgccttc
ctggagcagtggggcctgatcaattaccaggttgactctgagagccgaccgacacccatg
ggtcccccacccacttctcacttccacgtcctggcagacactccgtccagtctggtgccg
ctgcagcccaagacgtctcaggtgcacatacactctcagacacaaacacaaataaaacat
gcatacatgttctgggttgttttacacatgtcctctcattgtgcacctttanngacccct
gctactcagcagatgatgtcattcccggataaagtgaaggagaaaccagccgatctgcaa
aactttgggttgcggactgacatgtacagcaagaagacttgttctataaagagcaagagc
acagcgagctctatgagggagtggacagagcaagaaacactactactacttgaggggttg
gagatgtacaaagatgactggaacaaggtttcagaacatgtgggcagccgtacacaagat
gagtgcatcctgcacttcttgcggctgcccattgaagacccgtacttagaagaccactcg
tcgtccctgggaccactagccttccagccagtacctttcagccaggcaggaaaccctgtc
atgagctccgtggccttccttgcctctgtcgtagacccacgtgttgcctctgctgccgcc
aaatctgctctggaggagttttctcgtatgaaggaggaggttcctgcagcgcttgttgag
gctcacgtgaggcgggtggaggaggcagcgagggtcagcggccgacaggacccgctgtat
ggcttggagggtagcggcatcgcaggcactggcctggaggagggagacagacctgatgaa
agcagtgatgaaagtaagagtgacagccaaccaggtgaagagaagagggagaccaaggac
agcaaagacggagcgactgaggaagaggagaaacaggcagagaacgggaagaaggaggaa
gaacgaggaagagaagcagaaggagagagggagacggacaaaaccgagtcagagattggt
gatggggagaaggcgaaggacggaaaagagggcacagaggacggacaacgagaagcagag
agtgaaggagagaggaaggctaaggtggagcgtgacgttggagaggggaaccttgccact
gctgccgcgtctgcgctcgctgccgctgcggtcaaagctaagcacctggctgcagttgaa
gagaggaagattaaatctctcgtggctctgctggtggagacccaaatgaagaagctggag
attaaactccgacactttgaggaactggaaaccataatggacagagagagggaggccttg
gagtaccagcgtcagcagctgctggctgaccgtcagtccttccacatggaacagttgaaa
tatgccgagatgagggcccgccagcagcacttccagcagatccagcaccagcagcacagc
cagaccgccggcccccatgccaaccaggccgccccggcaccggccccgccacccccgacc
gcaagtcagcaggcccccaacacaccagcgccgcagccggcccccagtcccgcgccccca
gcctcagcttctgccccggcccctgagacacaagcccctcagggtgctcacacctcgcca
ccctgccctccaggcgcaaccccatctacccagtcaagctccagctccagcactactcct
gtactccatgagcccaccccccctcctgcaggggaaacactccacccctcagctacagtc
caacctccacagtga
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integrated database retrieval system
