Clinocottus analis (woolly sculpin): 137796606
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Entry
137796606 CDS
T10471
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137796606 (tmf1)
Membrane trafficking [BR:
cana04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
137796606 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
137796606
NCBI-ProteinID:
XP_068450724
LinkDB
All DBs
Position
Unknown
AA seq
1155 aa
AA seq
DB search
MSWFNASHLSSFAKQALTTAQKSIDRVLDIKEEDQWGDAVVLPFDDVTIPGKLSLSGGWG
MTQWEAPPEEKTTTPPPSSDAITTPVTRTVVDESENFFTTFLPPGDVQGVAINAQVVSVP
PAKSHRRPQEKEEENGEEAGAQKEVETDEGHGNQTVAESQPVELESPKADTILLQPVSPS
SSSDLPCNSDKSSEETDVGFADTHTECSQNQSDHQIEQDTTESPEPAAVTSEPESSAPCD
PSPSPTSKEVLVEHKDSKVEDRQSDTPSPPVSAFSSGTSTTSDIEVLDHESVLSESSASS
RQETGEGKAGLHLMQGSFQLLTASTCEDFPRLEDYSKLTESCGSSSDAFERIDSFSVQSL
DSRSVSEVNSDDDIPGSRTLASVTAGPPPLMVSSAVCQKQEDGEVEKEAEVEEVEEEEKE
EEEEDEEEGFTETMREQSLDEMEESGRSATPVNSEPPEEMTEQESEANVTLCDPTSKAEE
RIIPPITEEMKSVSTVQILELQKVIDELSGRLEKRELQLLAVSKDKASLEEQCDNLKDEV
ISLKEESSTVQSLKDEFTQRIADAERKAQLACKERDIAKKEIKGLREELSTRLHSSDTME
IIREKEEQIKGLLEEGEKLSKQQLQHSNIIKKLRVKEKESDTRITKQQRKTKEQEEELRQ
LQQVLDGKEEVEKQHRENIKKLNAVVERQEKELTRLQTDSEELQETNRSVQAALDNAYKE
LAELHKVHVSRTSEAEEVSLSRETQAKEQLSLALEKAQEEARLQQEALANQVADLRLALQ
RAEQQQARKEDYLREEIKELQQRLQEAETRNQELSQSVTSATRPLLRQIENLQASLGGQT
ASWERLEENISDRLADAQAQLAVAVEKERSATEDLLSIKSQLISLESQNSLLRQEKARLL
AKLDAEKNKREKLEDESSREHVDLENLRGEHRRLLEEAKKEKLLLTNQLEMEKMKVEQEK
KKSYLAHEALKEKERRTTIHSLGEPPASSTPSLSRSSSISGADNAGLHTSILSQDDCLDH
SLGTMTMSMSMSGTNLYEAARLSGGSSIMENLQSQLKLREGEIAQLQLEISSLERSRSVM
AEELVRLTNQNDEMEEMVQEIPTLKVQLKDLAQRHNTILQMYGEKAEEAEELRLDLEDVK
NMYKIQIDELLKNQK
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcgtctcatctgtccagcttcgccaaacaggcgttaacgacagct
cagaagtcaatcgaccgagttctggacatcaaagaagaggaccagtggggtgacgccgtc
gtcctgccctttgacgacgtcacaatacctgggaagctgtcgctaagtggaggatgggga
atgacgcagtgggaagcgccccctgaggaaaagaccaccacgcctcctccatcctccgat
gccatcaccacgcctgtcacacgcacagttgtggatgaatctgaaaactttttcactacc
tttctgcctcctggcgacgtacaaggcgtagccatcaacgcccaggtggtgtctgtaccc
cctgcgaagtctcacaggcggcctcaggagaaagaagaggaaaacggcgaagaggctggg
gcacaaaaagaagtcgagactgacgagggtcatgggaatcagacggtcgctgagagccag
cctgttgagcttgagtcgcctaaagcagacactatcctcctgcagccagtttctccatct
tcttccagtgacctcccctgtaacagtgacaagagcagtgaagaaacagatgttggcttt
gcagacacacacacagagtgctcacagaatcaatcagatcaccagattgagcaggatact
acagagtcaccagaacccgccgctgtcacttctgaacctgagagctctgcaccttgtgat
ccttcgccctctccgacctctaaggaagtactcgtagagcataaggactcaaaggtggag
gaccgtcaaagtgataccccctctccgccagtcagcgctttctcctcgggaacctcgact
accagtgacattgaagtgcttgaccatgagtctgtgttgagtgagagctcagccagctcc
agacaagaaacaggcgagggcaaggctggccttcacctaatgcagggctccttccagctt
ctcactgcctccacctgtgaagatttccctcgtctggaggactattccaagctcacagag
agctgtggctcatcttcggatgcatttgaacgcattgattccttcagtgtgcagtcattg
gatagccggagcgtcagtgaggttaactctgacgatgacatccctggcagtcggacacta
gcgtctgtcactgcaggccctcctcctttaatggtgtcgtcagctgtctgccagaagcag
gaggatggtgaggttgagaaggaagcagaggtggaggaggtggaggaggaggagaaggag
gaagaagaagaggatgaagaagagggctttacggaaacaatgagggagcagtcactggac
gagatggaggagagtgggcggagtgctacacctgtcaacagtgagccgccagaggagatg
acggaacaggaatctgaggctaatgtcacgctgtgtgatcccacctccaaagctgaggaa
cggatcattccaccaatcacagaagagatgaaaagtgtctcaacagttcagattttggag
cttcaaaaggtcattgacgagctgtcaggccgcctcgagaaaagagagttgcagctgctc
gcagtcagcaaagacaaggccagtctggaggagcaatgtgacaatctcaaagatgaagtg
ataagcctgaaggaggagagctccactgttcagtccctcaaggatgagttcacacagcgc
atagcagatgcagagaggaaggctcagctggcatgcaaagaacgagacatagccaagaag
gaaataaaaggcctgcgagaggagctttcaacaagacttcactccagtgatacaatggag
atcatcagagagaaggaagagcagatcaaaggcttgctggaagaaggcgaaaagttgtct
aagcagcagctgcagcacagcaacatcatcaagaagctgcgcgtaaaggagaaggagagc
gacacaaggatcaccaagcaacagaggaaaaccaaggagcaggaggaggagctccggcag
ctgcagcaggttctcgatgggaaagaagaggtggaaaaacagcacagggagaacatcaag
aagctgaatgcggtggtggagcggcaggagaaagagctgacccggctgcagacggactct
gaggagctgcaggagacgaacaggagcgtccaggctgctctggacaacgcttataaggag
ctggcagaacttcacaaggtgcacgtcagcagaactagtgaggccgaagaggtgtccctg
agcagggaaacgcaggccaaggagcagctgagcctggctctggagaaggcccaggaggag
gcccggctgcaacaagaagctctggccaatcaggtggctgacctgagactggctctgcag
agggctgagcaacagcaagcaagaaaagaagattatttgagggaggaaatcaaggagctg
cagcagaggcttcaggaggcagagacaaggaaccaggagctcagtcagagtgttacctcg
gcaacacgacccctactgcgacagattgagaacttgcaggcctctttgggcggacagacg
gcatcgtgggaaagactagaggagaacatctccgacaggcttgccgatgcccaggcacag
ctggctgtcgctgtggagaaggagcgatcagcaacagaagaccttctgtccatcaaatcc
cagctgatctctctcgagtcccagaactccctcctccgtcaggagaaggcccgactcctg
gccaagctggacgctgaaaagaacaagcgagagaaacttgaggacgagagcagcagggag
cacgttgatttggaaaatttgcgaggagaacaccgtcgcttgctagaagaggccaagaaa
gaaaagctgctgctgaccaatcaattagaaatggagaagatgaaggtggagcaagagaag
aagaaaagctacctggcacacgaggcactcaaggaaaaggagcggaggacaacgatccac
tcgttaggagagcctccagcctcctccacaccctccctgtcccgctcgagctccatcagt
ggcgcagacaatgctggtctacacacctctattctttcccaggatgactgtttagaccac
tctctgggtaccatgaccatgtctatgtcgatgagcgggaccaacctatatgaggccgcc
aggctgtccggaggctccagcatcatggagaacctccagtctcaactcaaactcagagaa
ggagagatagcacaactgcagctggagatctccagtctagagaggagtcgttctgtgatg
gcagaggagctggttcgactcaccaatcaaaacgatgaaatggaggagatggtgcaggag
atccccactttaaaagttcaactcaaggatctggcacagaggcacaacactatcctgcag
atgtatggagaaaaggccgaagaggcagaggagctgcgattggaccttgaagatgtgaag
aacatgtacaaaatccagattgatgaattgctaaagaaccagaaataa
DBGET
integrated database retrieval system
