Clinocottus analis (woolly sculpin): 137796796
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Entry
137796796 CDS
T10471
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
137796796 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cana04515
]
137796796 (nfasca)
Cell adhesion molecules [BR:
cana04515
]
Immunoglobulin superfamily
L1 family
137796796 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_VEGFR-1-like_5th
BiPBP_C
DUF3792
Motif
Other DBs
NCBI-GeneID:
137796796
NCBI-ProteinID:
XP_068451024
LinkDB
All DBs
Position
Unknown
AA seq
1417 aa
AA seq
DB search
MSGQGGHVALALMSLVLLLWRQAAPIEVPQDPKILQDLKQPPTIVKQSVKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCF
STNDLGVALSNKILLRVSKAPLWPKEVLEPVVVTEGTPLVLACNPPPGLPPPFTFWMNSA
MTPIPQDKRVSMGLNGDLYFSNVLTKDAHTDYSCNARFLFTHTIQQKNPFTLKVQTKEPY
NDTSYNATDPYGGRQVAESPPTFLSPSGTASSKMVLRDDQLLLECIAAGLPTPTITWFKK
GGDLPVRKVKFDNYNKTLKIINVSEEDAGEYVCMANSHFGNIRHSIFVQVKAAPYWLDKP
SNQVLAPEENGRLVCRANGNPKPSIEWLINGQPIESTPDSLSRQVLGDTIIFRSVQMGSS
AVYQCNASNQHGYLLANAFVSVLDMAPRMLGPKNQLIKVIENNRTFLDCPFFGSPLPELR
WFKNGQGSGLDGGHYRVHINGTLEIKRPRPEDEGTYTCVANSMLGTAENQVRLEVKEPTR
IVGVPEHQSAVRGSLARFDCKVKSDPSLPITVAWTKDDKPLSLGWRLRKDGESLLIPNVN
EGDEGTYTCTVKSEIDQDSASARLTVLEEASLNPSSALPPDRPDPPVELDLSDPTARSVR
LTWIPENDHRSPVKEFLVQFEENRWEPGRWQNLSTYPGDLNSVILQLAPYANYQFRVIAI
NAVGQSQPSRPSPRYLSNGAAPDAIPRGLRGWGSKKDNMEITWEPLLNLERNGPNLHYSV
TWRRKDLGEEWSNVTTEDSKHVIHNTETYVPYEIKVQARNEFGHGPESNVVVGYSGEDKP
TDAPTDLRVSKVDSTKANLHWKPVDLSSVLGEFKEYRLYYWRESSLVPGLVVSKEKKTKG
FYSIVAEPSGILSDLVPYSKYKMFLVVANNDYEGPPSNTVEITTKEGVPDAPKFFRINRR
TFDTIHLEWDKPLEPNGILIGYQLKYQTVNGSRVGRPQLETLPPNVTAFNVRMPDRSTRY
KFYLSALTQVGSGEVYAEESPHFANEENLTDPPALVELTDASLASAFSPTPPPLAPLPPT
TIAPTTISTSTSSATPTSTTTTTISTTTATTTTTTTTTIPSTTTTTEATTTTTPELVTVK
RTDQNVLVVHGRKIWNLTVEANNNYVNVSWRHNFPPGTSEFVLEFTLDSDKSVKVVPKQQ
APVTVADLIAGAKYQLRVYSHELNSVSSKPFIFKTNPGEAPPGQVEPGFQPAYIDQVDIA
TQGWFIGLMCAIALIILILLIVCFIKRSRGGKYPGGGCVTGFAKYLVRDKKDLALDPVDQ
KDQDGSFDYQNENENENENENSSDEDNKPLQGSQTSLDGNVKESDDSLVDYGEGGDGQFN
EDGSFIGQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggacaggggggccacgtggccctggctctcatgtcattagtgctattactgtgg
cgccaagcagcacccattgaagtcccacaagacccaaagatcctgcaagacctgaagcag
ccccccaccatcgtcaaacagtcagtgaaggactacattgtcgaccccagagataacatc
atcatcgagtgtgaggccaagggcaacccagtgccaacgttctcatggcgaaggaacggg
aagtttttcaacatcgggaaagatcccagggtgacgatgcgaaaacgctcgggaactctg
gagatcggtttccgcagtggaggacgaccagaggactatgagggggagtaccagtgtttt
tccaccaatgacctcggagtggctctgtccaacaaaatcctgctccgggtctccaaggct
cctctgtggcctaaagaggtgctggagccggtagtggtaactgaaggcaccccactggtt
ctagcttgcaaccccccaccgggcctgcctcctccattcaccttctggatgaacagcgcg
atgactccgatccctcaggataagagggtgtccatgggtctgaacggagacctgtacttc
tccaacgtcttgaccaaagacgctcacactgactacagctgcaacgctcgcttcctcttc
acacacaccatccagcagaagaaccccttcaccctcaaagtccagacgaaggagccgtat
aatgacacgtcttacaatgccactgacccctacggtggccgacaagtagctgagtccccg
ccgaccttcctctccccctcggggaccgcgagctcgaagatggtgctacgggacgatcaa
ctgctgctggagtgtatagctgctggacttccgacgccaaccatcacgtggtttaagaag
ggtggggacctcccagtcaggaaggtgaagtttgataactacaacaagaccctgaagatc
atcaacgtgtcagaggaggatgctggggagtacgtttgcatggccaacagccatttcggc
aacatacgccactccatctttgtccaggtcaaagcggctccttattggctggacaaaccc
tccaaccaggtgctcgctccggaggagaacggccggctggtgtgtcgggccaacggcaac
ccaaagcccagcatcgagtggctgatcaacggacagcccatagagagcactcccgacagc
ctcagcaggcaggtgctcggtgacaccatcatcttccgctcggtgcagatgggaagcagc
gctgtctaccagtgcaacgcctccaaccagcacggctacctgctggccaacgccttcgtc
agcgtcctcgacatggctccgaggatgctgggccctaaaaaccagctgatcaaagtcatc
gagaacaaccgcaccttcctcgactgtcccttcttcggatctcctctgccggagctacgc
tggttcaagaacggacagggcagtgggctggatggaggtcactaccgcgttcacatcaac
ggcaccctggagatcaaacggccccgaccagaggacgagggcacctacacctgtgtggcc
aacagcatgctgggaacggccgaaaaccaggtccgtctggaggtcaaagagccgactcgt
atcgttggagtcccagagcaccagtcggccgtcaggggctccctggctcgcttcgactgt
aaagtgaagtctgatcccagcctgcccatcaccgtggcctggaccaaggacgacaagcct
ctgtccctgggctggaggctgaggaaagacggggagtcgctgctcatccccaatgtgaac
gagggggacgagggaacctacacctgcactgttaaatctgagatagaccaggactcagcc
tcagcccgcctcacggtgttagaggaagcctccctcaacccctctagtgccttgcctcca
gaccgtccagaccctcccgtggaactggatctgtcagatcccacagcccgcagcgttcgc
ctcacctggatccccgaaaacgaccaccggagcccagtcaaggaattcctggtccagttt
gaggagaaccgctgggagccgggccggtggcagaacctgtccacataccccggagacctc
aactctgtcatcctgcagctcgccccctacgccaactaccagttcagggtcatcgccatc
aacgccgtgggccagagtcagcccagccggccctcacctcggtatctgtccaacggcgct
gccccagatgccatccccagaggtctacgaggatggggatccaagaaggacaatatggag
atcacctgggagcctctgcttaatctggagaggaacgggccaaacctgcactacagcgtg
acttggagacgcaaggatttgggagaggagtggagtaacgtgaccacggaggactccaaa
catgtcatccacaacacagagacctacgtgccttacgagatcaaagtccaggccaggaat
gagtttggacatggacccgagtctaatgtggtcgttggctactctggagaggacaagccc
accgacgctcccactgacctgcgggtgtcaaaggttgacagcaccaaggccaacttgcac
tggaagccagtggacctgagctctgtgctgggagagttcaaggagtacaggctgtactac
tggcgggagtccagtctggttccgggtctggtggtcagtaaagagaagaagaccaaaggt
ttctacagcatcgtggctgagccgtccggcatcctcagcgacctggtgccctactcaaaa
tacaagatgttcctggttgtggccaacaacgactatgagggtccacccagcaacacggtg
gagatcaccaccaaggagggagtgccagatgctccgaagtttttcaggattaaccggaga
acctttgacaccatccatcttgaatgggacaaacctctggagcccaacggcattctgatt
ggataccagctcaagtaccaaacagtcaatggctccagagtgggtcgtccccagttggag
actctccctcctaacgtgacagcgtttaacgtccgcatgccggaccgatccacccgctac
aagttctacctgtcagcgctcacccaggtggggtcaggggaggtttatgctgaggagtcc
cctcacttcgccaatgaagaaaacctcactgaccctccagctctagtcgagcttacggac
gcctccttggcttcggctttctctcctactcctcctcctctcgctcctcttcctcctact
accatcgctcctacaaccattagtacctcaacttcttctgccactccgacttctacaact
actactactatttctactactactgctactactactactactactactactactattcct
tctaccaccactacaaccgaggcgaccactaccacgactcctgagctggtcaccgtcaag
cgtaccgatcagaatgtgttggtggtccacgggcggaagatctggaatctgacggtggag
gcaaacaataactacgttaacgtcagctggagacacaacttcccgcccggcaccagcgag
tttgtgctagagttcacactggacagcgacaagtcggtgaaagttgtaccgaaacagcag
gcccccgttacagtggcggatctgatcgcaggcgccaagtaccaactgagggtttactcc
catgagctcaacagcgtcagcagcaaacctttcatctttaagaccaatccaggtgaggcg
ccacctggccaggtggaaccggggttccagccagcctacatagaccaggtagacatcgcc
actcaaggctggttcatcggcctgatgtgtgccatcgccctcatcatcctgatcctcctc
atcgtctgcttcatcaagaggagtcgcgggggcaaatacccaggtggtggttgcgtgact
ggttttgcaaaatatctggtccgtgacaaaaaagatctcgccttggacccagtagatcag
aaagaccaggacggatccttcgattaccagaacgagaacgaaaacgaaaacgagaacgag
aacagcagcgacgaggacaacaagcccctccagggcagccagacttcgctggacggcaac
gtgaaggaaagcgacgacagtctggtggactacggcgaaggcggtgacggccagttcaac
gaggacggctctttcatcggccagtacaccgtgaagaaggacaaggacgagacggagggc
aacgagagctccgaggccacctcgcccgtcaacgccatctactcgctggcgtag
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