Clinocottus analis (woolly sculpin): 137797420
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Entry
137797420 CDS
T10471
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K28837
protocadherin-19, delta 2
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
137797420 (pcdh19)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cana04515
]
137797420 (pcdh19)
Cell adhesion molecules [BR:
cana04515
]
Cadherins
Protocadherins
137797420 (pcdh19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Ig_CLSTN
Cadherin_2
Ig_Cad99C_N
Cadherin_FAT4_N
PepSY
Ig_BT4661_3rd
Motif
Other DBs
NCBI-GeneID:
137797420
NCBI-ProteinID:
XP_068451463
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MPTKEMELIQTIAVFLLYWVAAEAVINVKYGINEEMKPGSVIGNVTKDALKQGFQIALQP
PYLRVISNSEPRWVELSPAGILTTQMKIDRDVVCRQNPKCIISLEVMSNSMEICVIKVEI
EDLNDNAPRFPTSHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGSKIAELVVQKSLDRETQSHYTYEISAEDGGDPPKIGAVQLNIKVIDSNDNNPVFD
EPVYTVNVMENSPSNTLVIDLNATDPDEGTNGEVVYSFNSYVAEKTRDAFKIDSATGIIT
VNGVLDYETAKIYEIDVQAKDLGPNSIPAHCKVTVNVMDTNDNPPVISLLSLNTEMVEVS
ENAQRGYVIALVRVSDKDSGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQKDTY
NLTIQAEDSGTPPLRATKSLVVKVSDENDNPPHFLKPHYQEMVMENNLPGSCLLAVSAED
PDLGMNGTVSYSIVPGEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDNGN
PSLSSNATVRIVVLDVNDNTPVMTNPPLVNGTAEVSIPRNAGVGYMVTQVKADDYDEGEN
GRLTYTISEGDRAFFEIDQVNGEVRSTRMFGENAKSNYEITVVARDHGKPSLSASAYIVV
YLSPDLNAQEPIGPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCSFFYL
RRVAEYSYGNQKKSSKKKKLNKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSL
PLGCRRSESTFLNVENQNSRNAAPNHGYQHPFTGQAHQQPDLIINGMPLPETENYSIDSS
YVNSRAHLIKRPPCSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYVDTAVNDVLNM
TVPPNVCQLPDQDPSEGFHCQDECRILGHSDRCWMPRVSIPARAKSPEHGRNVIALSIEA
TTVDVPHYEDGTTKRTFATFGKDGPEDVERGELKGKRTQESQVCSPKANGGAVREAGNGR
EAASPITSPVHLKSPMSKPSSAYNTLKCRDAERIANHSLLRQPEGKDSEPAVREINTLLH
DGRDKESPSSKRLKDIVL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccaaggagatggaattaatacaaacaattgctgtgttcctcctttattgggtc
gcggctgaggctgttattaacgtaaagtatggaataaacgaggagatgaagcccgggtca
gttattggaaacgtgacaaaggacgcactaaagcaaggatttcaaatcgctctgcagccc
ccgtacttgagggttatttcaaattcagaaccacgatgggtggaactcagtccagccgga
atccttacaacccaaatgaaaatcgaccgagatgtagtttgtcgacagaacccaaagtgc
attatttccctagaagtgatgtcaaactctatggagatctgtgtcatcaaggtggaaatt
gaggatctgaacgataacgcacccagattcccaacgagccacattgacattgaaatctct
gagaatgcctcccctggtaccaggtttcccctagagggggcaagcgatccggactcgggg
atctttggagtgcaatcatattccatcactccaaatgagcttttcggactagaaataaag
accagaggagatgggtcgaaaattgctgagcttgttgtgcaaaaatcgttagacagggag
acccagtcccactatacgtatgaaattagcgcagaagatggaggagacccccctaaaata
ggcgcggtccagttaaatatcaaggtaattgattctaatgacaataaccctgtgtttgac
gagccagtgtacactgttaatgtgatggagaattcccccagcaatacattagtcattgac
ttgaatgcaacggatcccgacgagggcactaatggagaggttgtgtactcgttcaacagt
tacgtggccgagaagacgagggatgcgttcaaaattgactccgcaaccgggatcatcacc
gtgaacggtgttttggattatgaaacggcaaaaatatacgagatcgacgtgcaggccaaa
gatttaggtcccaactcaatcccagctcactgcaaagtcacggtgaatgtgatggacacg
aacgataacccgcctgtcatcagtctgctttcactgaacacagagatggtggaagttagt
gaaaacgcgcagcggggatatgtcattgcgctggtgagggtgtcggataaggattcaggg
gcaaacggtaaagtgcagtgcaggctgcagggcaatgttccgtttagacttcaagaatat
gagagcttctccacgatacttgttgatggcaggctggacagagagcaaaaggacacatat
aacctgactatccaagcggaggacagtggcacgcctcctttacgcgccacaaagtctttg
gtagtcaaagtctcggatgaaaatgacaaccctccccacttcctgaagccacactatcaa
gagatggtgatggaaaacaacctccctggttcatgtctgctggcggtgtcagcagaagac
cctgacctggggatgaatggcacagtttcctactccatagtccccggtgagatcaagcac
atggatgtaaacacatatgtcagcatcaacccatcaggccgcatttactccatgagatca
ttcgaccatgaatacaccaggacttttgatttcaaagtgttagccagagacaatggcaac
ccctctttatcaagtaacgccacggtgcgtatcgttgtcctggatgtcaacgacaacaca
cctgttatgacaaaccctccgctcgtgaatggcacggcggaggtttccatccccaggaac
gccggggtgggttacatggtgacccaagttaaggcagacgactacgacgagggggagaac
gggcggctgacctacaccatctctgagggggaccgggcgttctttgagatcgaccaggta
aacggagaggtgcgctccacccggatgtttggggaaaacgccaaatccaactacgagatc
acggtggtggcgagggaccacggcaagccctccctctccgcctcggcctacatcgtggtg
tacctctcaccggacctgaacgcacaggagcctatcggaccagtcaacctgtccctcatc
ttcatcatcgctctgggctccatcgcggccatcctgtttgtcaccatgatttttgtggcg
gtcaagtgcaagagggataacaaggagatccgaacgtacaactgcagtttcttctacttg
cgcagggtggcggagtactcatatggcaaccagaagaagtccagcaagaagaagaagctg
aacaagaacgacatccgcctggtgccacgtgacgtcgaggagacagacaagatgaatgtg
gtgagttgctcgtctctcacctcctcgctcaactacttcgactaccaccagcagagcttg
ccgctgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactcacgc
aatgcagctcccaaccatggctatcagcacccgttcaccgggcaggcccaccagcagcca
gacctcatcatcaacggcatgccactgccagagacggagaactattccattgactccagt
tacgtgaacagcagagcccacctcattaaaaggcccccatgtagcacatcgacattcaaa
gacctggaggggaacagtctgaaggacagcggccacgaggagagcgaccagaccgacagt
gaacatgacgtccagagaggacactatgttgacacggctgtcaacgacgtgctgaacatg
actgtcccccccaatgtttgccagctgccagaccaagatcccagcgaaggctttcactgc
caggacgaatgtcgcatcctcggccactctgaccgctgttggatgcctcgtgtctccatc
ccggcgcgtgccaagtcacccgagcacggccgtaatgtcatcgctttgtctatcgaggcc
accacagtggacgtgccccactacgaggatggcaccaccaagaggacttttgccaccttc
ggcaaggatgggccggaggacgtggaacggggagagttaaaggggaagcggactcaggag
tctcaggtgtgtagccccaaggccaatggaggggctgtccgagaagctggcaacgggcgc
gaggcggccagccccatcacttccccagtgcacctgaagagcccgatgtccaagccgtca
tctgcctacaacacgctgaaatgccgcgacgcagagcgaatcgccaaccacagcctgctg
cggcagcctgaggggaaggacagtgagccagctgtcagggagatcaacacgcttctccac
gatggccgagacaaggaatcccccagcagcaagcgcctgaaggacattgtgctctag
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integrated database retrieval system
