Clinocottus analis (woolly sculpin): 137798535
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Entry
137798535 CDS
T10471
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03015
mRNA surveillance pathway
cana03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137798535
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
137798535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137798535
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
137798535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
137798535
NCBI-ProteinID:
XP_068451912
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MAARPAAGPSSSKPDLGDLYSDLNQNDEDLDRLAEANELFDAVLTGSVDRDKKVTANVTP
PNKKLPKDEAKSTTVKSQQGRYSLRKLSLYIGNFPWWTSDKDIMCMAQTLGVNDIKEIKF
AENKLNGQSRGFAEVMVTSEESLKILLEKIPHCELNGDKVDCRFATRQNLGAFEDVANKR
IPLRISSKDSKESDSSDKIPSLLSQEPSHPPLPPHFPSHPLVNRFPSLPSPFLSHPPPPF
PHMPPNLPPPMPPPLFPPHQIHVPSQPPPSLHVNPAFFPPPHDGNSSQAYSQQKQTPRNT
DRDFEELMNRNKAVASSAISKAVSGATAGDLRVAMETLLTAIAIIKQSRVFADERCQALV
TSLKDCLVSIQGNYGYRSSSRSGEEERDRDRGRDRERDRDRDRERDRERDRERDREDSSG
WEGAGMSRRHRQRSRSGERDKERSRERERHRDYRDRYR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctgctagacctgcagctggaccaagtagctccaagccggacctcggagatctttac
agtgacctgaatcaaaacgacgaggatttggacagacttgcggaagcaaatgaacttttt
gatgctgttctaactggctcagtcgatcgggacaagaaagtcactgcaaatgtgactcct
cctaacaaaaagctacctaaagatgaggctaaatcaacaactgtgaaaagccaacaagga
agatactctctgaggaaactgtctttatatattggaaatttcccctggtggacatctgat
aaggacatcatgtgcatggctcaaacgttgggtgtgaacgacatcaaagagattaaattt
gctgaaaacaaacttaatggccagtcaagaggctttgcagaagtgatggtaacctcagaa
gagtcattaaaaatattactggaaaaaataccccattgtgagcttaatggggataaggta
gactgtcgctttgcaactcgccagaaccttggtgcgtttgaggacgtagcaaataaacgt
atacccctgcgtattagttccaaagattcgaaggagtccgattcttcggataagattccc
tcattattatcacaggagcccagtcatcccccattgcctccacatttcccatcacatcca
cttgtaaacaggtttccctcattacccagtccttttcttagtcatccaccgcctcctttc
ccgcatatgccgccaaacctccctccacccatgccaccccctttgttccctcctcatcaa
atccatgttcccagccaaccacctcccagtctgcatgtaaatccggcattctttccccca
ccacacgatgggaacagcagccaagcttacagccaacaaaaacaaacacctcgaaataca
gatagagattttgaggagctgatgaacagaaataaagccgttgccagcagtgccatcagc
aaagcagtgtctggagcaacagccggagacttgcgggttgccatggagactctattaact
gccattgccatcattaagcagtctagagtgtttgcagatgaacgttgccaagccctggtc
acctcactcaaggactgtctcgtctctatccagggcaactatgggtacaggagtagcagt
cgttctggggaagaagaaagagaccgggacaggggtcgtgacagagagcgcgacagagac
cgtgacagagaacgcgacagagagcgcgacagagagcgtgaccgagaagattcttctggt
tgggaaggtgcaggaatgtctcgaagacacagacaacgctcccggagcggggaaagggac
aaggaacgctcccgagaacgggaaaggcacagagattacagagaccgataccgataa
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