Clinocottus analis (woolly sculpin): 137798536
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Entry
137798536 CDS
T10471
Symbol
stx5a
Name
(RefSeq) syntaxin-5a isoform X1
KO
K08490
syntaxin 5
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
137798536 (stx5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137798536 (stx5a)
Membrane trafficking [BR:
cana04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
137798536 (stx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
Apolipoprotein
SEO_N
HrpB7
DUF16
Use1
Vac_Fusion
Syntaxin
MCPsignal
DUF2207_C
DUF6746
YwqH-like
DUF7260
Prominin
DUF5063
AI-2E_transport
Motif
Other DBs
NCBI-GeneID:
137798536
NCBI-ProteinID:
XP_068451547
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MTCRDRTLEFKSACTSLQSRPNGVEPSKPSLSALRQRSDFTVMAKRIGKDLSNTFAKLEK
LTMLAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLVRSRGAPGGRHIQTHSNT
IVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSQPPVSSSPLMANNFRSRKKGAQ
EPHAAREPRNGYQGNTTSNLKESSVLMQDESRSLGDVAINMDSQTNPLQLQLVDEQDSYI
QSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDANVEDTQLNVESAHTEILKYF
QSVSSNRWLMIKIFLVLVVFFIVFVVFFA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgccgtgaccgtactcttgagttcaagtccgcctgtacatctctccagagcaga
ccgaatggagtcgagcccagtaaaccaagtctcagcgctctcaggcagcgcagtgacttt
acagttatggctaagaggatcggaaaagacttgagcaatacatttgccaaactggaaaag
ctcaccatgttggcaaaaagaaaatctctgtttgacgacaaggcagtggagattgaagag
ctaacgtatatcattaaacaagacatcaacagtctaaacaaacagattgcacagctgcag
gacttggtgaggtcccgcggagctccaggtggccgacacatccaaacccactctaacact
atagtggtgtcattacagtccaaactggcttcaatgtccaatgactttaagtcagtccta
gaagtcagaacagagaacctgaagcagcaacgcagcaggagagagcagttctcccagccc
ccggtctcgtcttctcctctgatggccaacaacttcaggagccgcaaaaaaggggcccag
gagccgcatgcagctcgtgagccacgcaatggttaccagggcaatacaacctcaaattta
aaagagagctcggtcttgatgcaggatgagtccaggagtttgggcgatgtagccatcaat
atggactctcaaaccaatccgttgcaactgcagcttgttgatgagcaggactcgtacatc
cagagccgtgcagacaccatgcagaacattgagagcaccattgtggagctgggctcgata
ttccagcagctggcacacatggtcaaggagcaagaggagaccattcagaggatcgatgct
aacgtggaagacacgcagcttaacgttgagtccgcccacacagagatcctcaaatacttc
cagtcagtctcctccaaccgctggctgatgatcaagatctttctcgtcctcgtcgtcttt
ttcatcgtctttgttgtcttcttcgcttga
DBGET
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