KEGG   Clinocottus analis (woolly sculpin): 137798536
Entry
137798536         CDS       T10471                                 
Symbol
stx5a
Name
(RefSeq) syntaxin-5a isoform X1
  KO
K08490  syntaxin 5
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:cana00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    137798536 (stx5a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cana04131]
    137798536 (stx5a)
Membrane trafficking [BR:cana04131]
 SNARE
  Syntaxin (Qa)
   Stx-cisGolgi
    137798536 (stx5a)
SSDB
Motif
Pfam: SNARE Syntaxin-5_N Apolipoprotein SEO_N HrpB7 DUF16 Use1 Vac_Fusion Syntaxin MCPsignal DUF2207_C DUF6746 YwqH-like DUF7260 Prominin DUF5063 AI-2E_transport
Other DBs
NCBI-GeneID: 137798536
NCBI-ProteinID: XP_068451547
LinkDB
Position
Unknown
AA seq 329 aa
MTCRDRTLEFKSACTSLQSRPNGVEPSKPSLSALRQRSDFTVMAKRIGKDLSNTFAKLEK
LTMLAKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLVRSRGAPGGRHIQTHSNT
IVVSLQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSQPPVSSSPLMANNFRSRKKGAQ
EPHAAREPRNGYQGNTTSNLKESSVLMQDESRSLGDVAINMDSQTNPLQLQLVDEQDSYI
QSRADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDANVEDTQLNVESAHTEILKYF
QSVSSNRWLMIKIFLVLVVFFIVFVVFFA
NT seq 990 nt   +upstreamnt  +downstreamnt
atgacgtgccgtgaccgtactcttgagttcaagtccgcctgtacatctctccagagcaga
ccgaatggagtcgagcccagtaaaccaagtctcagcgctctcaggcagcgcagtgacttt
acagttatggctaagaggatcggaaaagacttgagcaatacatttgccaaactggaaaag
ctcaccatgttggcaaaaagaaaatctctgtttgacgacaaggcagtggagattgaagag
ctaacgtatatcattaaacaagacatcaacagtctaaacaaacagattgcacagctgcag
gacttggtgaggtcccgcggagctccaggtggccgacacatccaaacccactctaacact
atagtggtgtcattacagtccaaactggcttcaatgtccaatgactttaagtcagtccta
gaagtcagaacagagaacctgaagcagcaacgcagcaggagagagcagttctcccagccc
ccggtctcgtcttctcctctgatggccaacaacttcaggagccgcaaaaaaggggcccag
gagccgcatgcagctcgtgagccacgcaatggttaccagggcaatacaacctcaaattta
aaagagagctcggtcttgatgcaggatgagtccaggagtttgggcgatgtagccatcaat
atggactctcaaaccaatccgttgcaactgcagcttgttgatgagcaggactcgtacatc
cagagccgtgcagacaccatgcagaacattgagagcaccattgtggagctgggctcgata
ttccagcagctggcacacatggtcaaggagcaagaggagaccattcagaggatcgatgct
aacgtggaagacacgcagcttaacgttgagtccgcccacacagagatcctcaaatacttc
cagtcagtctcctccaaccgctggctgatgatcaagatctttctcgtcctcgtcgtcttt
ttcatcgtctttgttgtcttcttcgcttga

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