Clinocottus analis (woolly sculpin): 137798658
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Entry
137798658 CDS
T10471
Symbol
cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137798658 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137798658 (cstf2)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
137798658 (cstf2)
U7-dependent histone pre-mRNA processing factors
137798658 (cstf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
137798658
NCBI-ProteinID:
XP_068451654
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MANLAAAAAAAAAAAVAANRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGLVVSFRL
VYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTG
APIIESPYGDTIQPQEAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQ
LAYALLQAQVVMRIVDPEIALKMLHRQTPVPPLIPSGQVGGVPPLNPPSAPPSVQMSQPQ
SGPGMHVNGAPQMMQPPNMGGVSGPMPGPGPGQGPGPGAGPAGPPGPGGIPPRGLLGDGP
NDPRGGTLLSVTGEVIEPSRGYMAAPPPHQAPPVHMAQMPSGPPPDMRGPPMDMRGPPMG
EPRNMMGDPRGPPMMEPRGPPMETRGRDPRAMDARGPVTGQRVPMATGMQVPVPHNMGPN
APPPARPGPGISGAPPSGGGFSPGQSQVSTQDQEKAALIMQVLQLTPEQIAMLPVDQRQS
ILILKEQIQKTAGGAP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttagccgctgctgctgcggctgcagctgccgctgctgtcgccgctaacaga
gacccggcagttgatcgttcattgcgatccgtgtttgtggggaacatcccgtacgaagct
acagaggagcagctgaaagacatattttctgaagttggacttgttgtcagcttcaggttg
gtatatgacagggaaacaggaaagccaaagggatatggtttctgtgaataccaagaccag
gagacggccctcagtgcaatgcggaacctcaacgggagagagttcagcggccgggccctc
cgtgttgacaacgcagccagtgaaaaaaacaaggaagagctcaaaagtttgggaacgggg
gctcctattattgagtctccttatggagataccatccagccacaggaagccccagagtcc
atcagcagagctgtggccagtcttcctccagagcagatgtttgaactcatgaaacagatg
aagctgtgtgtgcagaacagtccccaagaggcaagaaacatgctgctgcaaaaccctcag
ctggcgtacgctctgctgcaggcccaagtggtcatgcggattgtggaccctgagatagcc
ttgaaaatgctccaccgtcaaacgcccgtcccgcctctgattcccagcgggcaggtcgga
ggagtaccgccgctcaacccaccttctgctccccccagcgtgcagatgtctcagccgcag
tctgggcctggaatgcatgtcaatggagcacctcaaatgatgcagccccccaacatgggt
ggtgtctctggaccaatgccaggaccagggccgggacaaggaccgggaccaggagcagga
cctgctggacctccaggacctggcggtatcccccccagaggcctgctcggagacggtccc
aatgatcccagaggaggaactctactgtcggtcacaggagaggtcatagagcccagtcgg
ggttacatggcagctccaccgccccaccaagccccacctgtgcacatggcccaaatgcca
agtggaccccctccggatatgagaggccctccaatggacatgagaggcccacccatgggt
gaaccacgcaacatgatgggtgaccccagagggccccctatgatggagccacgcggaccg
ccaatggagaccagaggtcgggacccgagggcgatggacgcacgtggtccagtgaccggc
cagagggttcccatggcgacgggaatgcaagttcccgttcctcacaacatgggcccaaac
gcgcctccacctgcaagaccgggtcctggtatctctggtgctcctccatcaggaggagga
ttcagtccggggcagagccaggtctccacacaggaccaggagaaggcggccctcattatg
caggtcctgcagctgaccccagaacagatcgccatgttgcccgtggaccagcgtcagagc
atcctcatcctcaaagagcagattcagaagactgcaggaggtgcaccttga
DBGET
integrated database retrieval system
