Clinocottus analis (woolly sculpin): 137799032
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Entry
137799032 CDS
T10471
Symbol
nbr1b
Name
(RefSeq) next to BRCA1 gene 1 protein isoform X1
KO
K17987
next to BRCA1 gene 1 protein
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04137
Mitophagy - animal
cana04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
137799032 (nbr1b)
04137 Mitophagy - animal
137799032 (nbr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137799032 (nbr1b)
03029 Mitochondrial biogenesis [BR:
cana03029
]
137799032 (nbr1b)
Membrane trafficking [BR:
cana04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
137799032 (nbr1b)
Pexophagy
Other pexophagy associated proteins
137799032 (nbr1b)
Aggrephagy
Cargo receptors
137799032 (nbr1b)
Xenophagy
137799032 (nbr1b)
Other autophagy associated proteins
Midbophagy
137799032 (nbr1b)
Mitochondrial biogenesis [BR:
cana03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
137799032 (nbr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
N_BRCA1_IG
PB1
UBA_NBR1_C
Motif
Other DBs
NCBI-GeneID:
137799032
NCBI-ProteinID:
XP_068452205
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MDFYINLKVNFRGNSKNFLLSGSETKSWESMEAMVKRSFGLCSLQLTYFDEENEEVSINS
QADYEEALKSAARQGNRLHMNVYETRGQPARVSTTKASGTEPKRGFRPPQHCPTLAQVVS
RKVQAAVPEQGMQVILKDMKGTKEEDKTPPAWFTSYMEKFKDQVVREAVEKICREFSGQC
CIHKPLGAGGAAGGGGRGDAGGGAEAQQVPEVSSSTLPGAPSSSTPPCSSCRGQTTGGGY
QCSVCTSCTLCEPCSFSHDPSHNLVRARTPLSIPEHGSPAPDHSRFYRRGDRSFRKAEKQ
RLKAEKRLLKAEVKEIRKQLRMERRGIQWSSSHRDGSSSPVLLQPRATQHNSPERPKRPC
PLVVPAMTAAFLDENLPDGTRLRPATKFIKYWKMRNTGTISWSADTKLKFMWGNLAVGSG
DRWREVSVPFLQPGQVGIVSVALCAPAVEGSYTSHWRLAHAGEQFGPRVWCSIVVDALAP
APMMADGILVSPCVTPQQGKNPAAKDGKACAAREPPPMSVDQEEYYIPSVDLLTAQDLLS
FELLDINIVQELESVPNNTPADMTPCMSPLPQDGHLQDKASPSLALIQEETEAIKSIMDV
PHGAGPGAEGGGVPAQEEGEDDISGTQFVCETVIRSMTLEEAPDHAPLRGSRPAPVVRPA
AQGGSSSFSSSSCVKSKAVKSEESPNSSPASSKSPPRPSAALMASLPPPLKASLLAPPYV
ASTLGPGPSSVPTPLIAPPRSPPREHSSPAGEGEEPHMENPRVEKEEKKRKKGGEKREGT
RSRSSSTSSEDYIIILPDCFDTSRPLGESMYSSALSQPGDVPAKTPTDTETPCPDQPGSS
TLEGELGAAAPGTAMSGASSANDMLCTSQTLDDEPLTPEVVAPPQVILTLSPGSGETEVE
PNTSGEEAEGCELYQTEDVSGPEQTQTDDAEVTEDTEEDNSEDPRHPGLTSGLVKGALSV
AASAYKALFTGQGPTQPPVDASTQDTMMAVLVEMGFGDRPLNQRLLKKYNYNLLDVVNEL
VQMTDNDWYSTRY
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggacttctacatcaacctgaaggtgaatttcaggggaaattccaaaaatttcctcctg
tcgggatccgagaccaagagctgggagtcgatggaggccatggtgaagcgctccttcggc
ctgtgcagtctgcagctgacttacttcgatgaggagaacgaggaggtgtccattaacagc
caagcggactatgaggaggcattgaagagtgcagcgcggcaggggaaccgcctccacatg
aacgtgtacgagactcgaggccagccggcgagggtctccaccaccaaggccagcgggacg
gagcccaagaggggcttcagacccccgcagcactgccccaccctggcccaggtggtcagc
cgcaaagtccaggcggcggttccagagcagggcatgcaggtgatcttgaaagacatgaag
gggaccaaagaagaagacaagacccctccagcctggttcacctcctacatggagaagttt
aaggaccaagtggtccgagaagcggtggagaagatctgccgggagttctctggacagtgc
tgcattcacaagcccctgggggccggaggagcggcaggaggaggcggcagaggagacgcc
ggaggaggagcagaggcccagcaggtccccgaggtttcctcctccactctgcccggcgct
ccgtcctcctccacgcccccctgctcctcctgccggggccagaccacggggggaggctac
cagtgcagtgtgtgcacttcctgtaccctgtgtgagccctgcagcttctctcatgacccc
agtcacaacctggtgcgagccaggacccccctgtccatcccagagcacgggtctccagcc
ccagaccacagcaggttctaccggcgaggcgaccgcagcttcaggaaggcggagaagcag
cggctgaaagctgagaagcgtctgctgaaggccgaggtcaaggagatccgaaagcagctg
agaatggagaggcggggcatacagtggagctcctcccacagagatggaagctcctccccc
gtcctgctgcagcctcgtgccacccagcacaacagccctgaacgtccgaagcgtccctgt
cccctggtggttcctgccatgacagcggcctttctggacgagaaccttcctgatgggacc
cgcctgcgtcccgcaaccaagttcatcaagtactggaagatgaggaacactggaaccatc
agctggagcgccgacaccaagctgaagttcatgtggggaaacctggcggtgggttctggg
gaccggtggagggaagtgtctgttcccttcctccagccaggacaggttggcatcgtgagc
gtggcgctgtgtgctccggccgtagagggctcctacacctcccactggcgcctggcgcac
gccggagagcagttcggcccccgggtctggtgcagcatcgtggtggacgctctggccccg
gcgcccatgatggctgacgggatactggtgtcgccgtgcgtcacgccgcagcagggtaag
aacccagcggcgaaggatggaaaagcctgtgcagcccgggagccgccacccatgtccgtg
gaccaggaggagtactacatcccgtctgtggacctgctcacggctcaggatcttctgtct
ttcgagctgttggacatcaacatcgttcaagagttggagagcgtcccaaacaacacccct
gctgacatgacgccctgcatgtcccctctgcctcaagacggccacctgcaggacaaggcc
agtccttctttggctctcatccaggaggaaaccgaagccattaagagcatcatggatgtc
cctcatggggcggggcctggagcagagggaggcggagtcccggctcaggaggaaggggag
gatgacatcagcgggactcagtttgtttgcgagactgtgattcgctcaatgaccctggag
gaggcccctgaccacgcccctctgagagggtcccgcccagcgccagtggtgcgtccagct
gctcagggcggctcttcctccttctcctcctcctcctgtgtgaaaagtaaagcagtgaaa
tccgaagagagccccaacagcagccccgcttcctctaaaagccccccgagaccctcggcg
gcgctgatggcttccctcccgccgccactgaaagcctcgctgctggctccaccgtatgtg
gcctccacgctgggacccggacccagctcggtcccgaccccgctcattgctccgcccagg
tccccaccgcgggagcacagcagcccagcaggtgaaggtgaggaaccccacatggagaac
ccccgtgtagagaaggaggagaagaagaggaagaagggaggggagaagagagaagggacg
aggagtcgctcctcctccacctcctcggaggattacatcatcatcctccctgactgcttt
gacaccagtcggccgctgggggagtccatgtacagctcagctttgtcccagcctggggac
gtccctgccaagacccccacagacacagaaaccccatgtccagaccaaccgggcagctcc
accctcgaaggggagctcggtgcggcggctccagggacggccatgtcgggcgccagcagc
gccaacgacatgctttgtacctctcagacgctggacgacgagcctttgacacctgaagtg
gtggcaccgcctcaagtcatcctcactctcagtccagggagcggtgaaacagaggtggag
cctaacacttctggggaagaagcagagggctgtgaactgtaccaaaccgaggatgtctct
ggtcctgaacaaactcagacagatgatgctgaagttactgaagacacagaggaggacaac
tctgaggaccccaggcacccgggcctcaccagcggcctggtgaaaggagcgctgtcagta
gctgcgtctgcctacaaagctctgttcactggacaaggccccactcagcctccagtggac
gcatccacccaggacaccatgatggccgtgctggtggagatgggtttcggggaccggccg
ctaaaccagcggttgctgaagaaatacaactacaacctgctggacgtggtcaacgagctg
gttcagatgactgacaatgactggtactctacacgctactga
DBGET
integrated database retrieval system
