Clinocottus analis (woolly sculpin): 137799683
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Entry
137799683 CDS
T10471
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137799683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cana03021
]
137799683
03036 Chromosome and associated proteins [BR:
cana03036
]
137799683
Transcription machinery [BR:
cana03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
137799683
Coactivators
SAGA/TFTC/STAGA complex
137799683
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
137799683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
137799683
NCBI-ProteinID:
XP_068452574
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MAGASDPLEDMLFTEVDEKAVSDLVGSLESQLGDRKASASPFPAGTRDGAPPAAGQLSGK
ARDRAGSLDPQQGHPGAGLAPEPGADEPLSGRVLPSSGSAVPAAAGPSTATISPVPGPLT
LTTRSTASFQRAPGPSTEAVRNASPGLQSVNGGAGAVKLVVNSVPAAVVSTGSSGAPLQR
HQGPVAQNGVESKGAPPSPQVNHSTPLMHTKVLVPSQPPVLLTSPPQAPAAQTGTSTAAV
TLKPVVNGVGQAPVAAARPPAPPPVAASLQQQRPGLVAPRAPAPQTPLAVRPQQQTTIQL
PPGFTMPPGMVLVRTETGQLVMVPQQVLAQAQAKTQQGQAVANIGQRPGTPTAGTAIRVS
TAATAPQTVRLASPAQTRMVQPPSATNVQKTITVSPGGAVVKMAPPQMAPSQKVVSTPLR
PGGPTPAPPPTPTARVSVVSQEMQENVKKCKNFLATLIKLASHNSPSPDTSKNVKSLVQD
LLDAKIEPEEFTSRLQAELKSSPQPYLIPFLKKSLPALRLSLLSSQQSLVTPGSLAPPPM
APGSVTAATIRPRLPISPAGVRLNTPLTNAAVMSRPAVQRTPVVFTQTLRPQGTLVRGPT
TIINKSPLAVAAQANQRKLSDPGGGTFRDDDDINDVASMAGVNLNEENARILATSSELVG
TKIRSCKDEAFLPAGLLHRRILDTAKKLGVTEVPLEVVNLVSHATQSRLRSLLETVSAVA
QHRSDGGRDEEHHEQTSDVRSQLRFFEHLERMEKQRKDDQEREILLKAAKSRARQEDPEQ
ARLKQKAKEMQQQELALLRQRDANLTALAAIGPRRKRRQDSPGGSGSGPEVAPGSGPGSS
PGSSSRQQLRQRITRVNLRDFIFCLEQDRSTARSMTLYKALLK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctccgatccgctggaggacatgctcttcaccgaggtggacgagaaggcg
gtcagcgacctggtgggttctctggagtcgcagcttggagaccggaaagcttccgcctct
ccgtttcccgccggtacccgggacggagcgccgccggccgccgggcagctctcggggaaa
gcgcgcgacagagcggggtctctggatccgcaacaagggcaccccggagcggggttagcc
ccggaacccggagcggacgagccactctccggaagagtcctcccgtcctccgggtccgcg
gtccccgccgcagccggtccctcaacagccactatctccccggtaccgggacccttaact
ttgaccacccgctccacagccagcttccagcgggctccgggtcccagcaccgaggcggtc
cggaacgcttctcccggactacaaagtgtgaacggcggcgctggagccgtgaagttggtg
gtgaactcggttcctgcggcggtggtgagcaccgggagcagcggggcccccctgcagaga
caccagggtccagtagcccagaacggagtggagtccaagggtgccccccccagccctcag
gtgaaccacagcacccctctgatgcacaccaaggtgctggtgccgagccagcccccagtc
ctcctgaccagccccccccaggcccctgcagcccagaccgggaccagtacggctgccgtg
accctgaagccggtggtgaacggagtgggtcaggcccccgtggccgctgcgaggcccccg
gccccccccccagtggcagcctccctccagcagcagagacccggcctggttgccccccga
gcgccggctcctcagacccccctggccgtccggccccagcagcagaccaccattcagctg
cctcccgggttcaccatgcctccaggtatggttctggtccggaccgagacgggtcagctg
gtgatggtccctcagcaggttctggcccaggctcaagccaagacccagcagggccaagcg
gtggccaacattggccagagacccggaacaccaaccgccggcaccgccatccgggtcagc
accgccgccacggctcctcagaccgtccgcctggcgtcccccgctcagaccagaatggtt
cagcctccatccgccacaaacgtacagaagaccatcacggtgtctcctggtggagcggtg
gtgaagatggccccccctcagatggccccttctcagaaggtggtctcaacccccctaagg
cccggaggccccacgcccgccccccctcccacgccaactgccagggtctccgtggtgtcc
caggagatgcaggagaacgtgaagaagtgtaagaacttcctggcaacgctcatcaagctg
gcgtctcacaactccccctcccccgacacctccaagaacgtcaagtccctggtgcaggac
ctgctggatgcaaagattgaacccgaggagttcaccagtcgtctgcaggctgagctgaag
tcctctccacagccctacctcatacccttcctcaagaaaagcctccccgctctgcgtctg
tctctgctcagcagccagcagtctctggtgacccccggttccttggctcctcccccgatg
gcccccggctccgtcaccgccgccaccatcaggccgcggctgcccatcagtccagctggc
gtcagactgaacacgccactcaccaacgcagcggtgatgagcagacctgcagtccagaga
acacctgtcgtcttcacccagacactcagacctcaaggaacacttgtcagaggacccaca
actataatcaataaaagtcctttggccgtggcagcacaagccaatcagaggaagctgagc
gacccggggggcgggacattcagagatgacgacgacatcaacgacgtggcgtccatggcc
ggagtcaacctcaacgaggagaatgcccggatcctcgccaccagctcggagcttgtgggc
accaagatccgctcctgtaaagatgaagccttcctgcccgccggcctgctgcaccgccgc
atcctggacacagccaagaagctgggggtgacggaggttcctctggaggtggtgaacctg
gtgtctcatgccactcagtccagactgcgctctctgctggagacggtgtcggccgtcgct
cagcatcgatcagacggagggagggatgaagagcatcatgaacagacgtcagacgttcgc
tctcagcttcgtttctttgagcatttggagcgaatggagaaacagaggaaggacgatcag
gagagagagatcctgctgaaggctgccaagagccgagcgagacaagaagatcctgaacaa
gctcgtctgaagcagaaagctaaagagatgcagcagcaggagttggctctgctgagacaa
cgagacgccaacctcacggcgctcgccgccatcgggccgcgcaggaaacgccggcaggac
tcaccgggagggtcggggtctggacccgaggtggccccgggctcgggccccggctcctcc
cccggctcctcttcccgccagcagctccgccagcgcatcactcgagtcaacctcagggac
ttcatcttctgcctggagcaggaccggtccaccgcccgctccatgaccctctacaaggcc
ctgctgaagtga
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