Clinocottus analis (woolly sculpin): 137799687
Help
Entry
137799687 CDS
T10471
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
cana04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137799687 (lamb4)
04518 Integrin signaling
137799687 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137799687 (lamb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB1
LAMB4
DUF948
F5_F8_type_C
DUF2064
Motif
Other DBs
NCBI-GeneID:
137799687
NCBI-ProteinID:
XP_068452578
LinkDB
All DBs
Position
Unknown
AA seq
1796 aa
AA seq
DB search
MIFILFIVFFPAAGLQEAPEGRCPGGSCNPQLGDLMVGRASRLSASSTCGLDGPQKYCII
GYLEEEQKCFTCDSRLPYNHHGNPNSHRIENVITTFDPERKTKWWQSENGAHHVSVRLDL
ETVFQFSHLVLTFKSFRPAAMLVERSKDFGRSWKVLRYFAEDCSRSFPSVSSQPANSIDD
IVCDSRYSGSDPSTNGEVVLKALDPIFELEDPYAPNVQELITLTNLRVNFSGLFTLGDLL
QGDRRRTPEDQYYYALYNMVLRGSCFCHGHASSCTPLDAGRGDTFTQTNMVHGRCVCQHN
TAGENCERCQDFHHDAPWRPGGGSTASACRRCNCNGHSHSCHFDAARFEASGRLSGGVCE
DCLHDRAGPQCERCRPFLFQDPERAPDHPLACRPCDCDPAGSEGGGLCDALSGRCVCKEQ
VEGRRCDRCKHGFFNLRADEPAGCQVCRCHVLGSVGSCDQQTGSCECVPVASGPLCDQCL
PGFWGLGSSESRCSPCDCDVGGAYSSRCSPEDGQCQCLPNMAGPRCSDPAPRYFLPPLDY
FLYEAELAAPLQTGGSPPPPPPSPPPSSPLLDPVVSPQCERFYREHGYDFKFMNGRVVLV
RRTRHLARRWRRGQQSRLPLEPGHALQIIPRQRTVGQPITWTGLGLVRVKEGAGLRFTVD
NLPSPMDYQLVIRYESEPPSDWLASVSIATVSPGSGGCSSDPTGSTSLVLPANSRWGVLD
SGLCLTAGARYLVDVVFSKLSGSDGSHILIDSLGLVRAPGAAQDFCSQRSVDSSQLFGCV
GLNVELNADESLREVCEGLMKSLSARVHNGAVLCRCNADGSLGPSCSKLGGFCECKPNVI
GRCCDTCSPLTFGFGPDGCEPCECDPQGALSEPCDQVGGQCVCRSEVTGRRCDRCQTAFW
GFPSCRPCQCHELSEECDQETGECLNCRQHATGPMCERCVEGYLGDPGSGQPCQPCLCPE
VTNSGRFFATSCQHDPQSLSLTCTCREGHAGPRCDRCSPGFYGDLRLPGARCMACPCNDN
INPADPTSCDSQTGACQRCLHHTTGARCQDCRPGYYGDALDQDCKECSCDRRGTEVTQCP
LGSPCFCDSRTGQCPCRTGVMGALCDECEDGYWNLDGASGCQACSCDSVNSFSNMCSKVT
GQCPCRPEFGGRQCDECGENHFGNPDLQCISCDCNVEGTERPSCDPETGECLCRVGVAGI
FCDECAPGYDSVFPACGECHPCNVLWGGDVADVQRAALRMRSFIPRHRDDDDVRTGDRHL
QQMLKMHSALDDLAAQTGRSQPDLQELEELCAEIRKLHNAIDPNAIVIDPSALLNMEMDN
VDLEFRKLLNSVKEKLLQSPDKEEEHPDVLLDDIQKLHETFVLDEQRVRNATNAVEGSMD
RRQEVKHKLNMCSSRGDLMLLEKKVQELSVANLNRAICGGPGLEDCSGCGGALCGLDLGK
RKCGGPNCDGVIPVSQKASETAEGAKEQLLTLPSRLLEAQNKINNVKQQAEDTKDQAKDL
QDQIHNNMDSLKREKNKSKELIQQVKDYLVDEMVPPEDIEKMAQAVLAIRLPRSPDQMQS
LINDINNLLSNPNNGPADLEEHTNTAHTLLQEAQQLQERMKNIDVTEIRRDIYGAENAQD
KANDDLDAGSRDKDAAGSRVQDMNNKLADIDTKLMNRRSEDLQNQSEYLRRKTEQNRETA
EESREAADSALNQTTDTEPELREAMKQFELLKQKRSGQLAGDEAGDRLRKTREEAQKVKE
QVEDKLQQLQDLDQRIQQLIQNKEDKAAEVAILLEDVDSLRREISRRADGYVSCTA
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcatcctcttcatcgtctttttcccagcagctggactccaggaagcccctgag
ggccgctgtcctggcggctcctgtaacccccagctgggcgacttgatggtgggtcgagcg
tctcggctgtcggcctcatccacctgcggtctggacggaccgcagaagtactgcatcatc
ggatacctggaggaggagcagaagtgcttcacatgtgactctcgtctgccatacaatcac
catggcaaccccaacagccaccgcattgagaacgtcatcacgaccttcgaccccgagagg
aaaacaaaatggtggcagtctgaaaacggagctcatcacgtcagcgtccggctggacctg
gagaccgtgttccagttcagtcacctggtgctcaccttcaagagtttccgtccggcggcc
atgttggtggagcgatcaaaagattttggacggagctggaaggttttgcgttactttgca
gaagattgttctcgttcgttcccgtctgtttccagccagccggccaacagcatcgacgac
atcgtctgtgacagcagatactccggatcggatccgtccaccaacggagaggtggtgctg
aaagctctggatcctatctttgagttagaggacccgtacgcacccaacgtccaagagctg
atcaccctgaccaacctccgggtgaacttctctggtctcttcacgctgggtgacctgctg
cagggtgaccggcgcaggactcctgaagaccagtactactatgccctgtacaacatggtg
ctgcgagggagctgcttctgccacggacacgccagcagctgcaccccgctggacgcaggg
cggggagacaccttcacccagaccaacatggttcacggccgctgtgtttgtcagcataac
acagccggagagaactgtgagcgctgccaggacttccaccacgacgccccctggaggcct
ggagggggaagcaccgccagcgcctgcaggagatgcaactgtaacggccactcgcactcg
tgtcacttcgacgccgctcgctttgaagcgtccggccggctgagcggcggcgtgtgtgag
gactgcctccacgacagggcggggcctcagtgcgagcgctgccggccgttcctgttccag
gaccccgagagagcgccggaccacccgctcgcctgcagaccgtgtgactgcgacccggcg
ggctcagagggcggcggcctgtgtgacgcgctgagcggcaggtgtgtgtgtaaggagcag
gtggagggccggcgctgcgaccgatgcaaacacggcttcttcaacctgagagcggacgag
ccggccggctgccaggtgtgcaggtgccatgtcttgggaagtgttgggtcatgtgatcag
cagacaggaagttgtgaatgcgtccctgtggccagcggtcctctgtgtgatcaatgtctg
ccagggttctggggtttgggatcctctgagtccaggtgttctccatgtgactgtgatgtg
ggaggagcttacagcagcaggtgttctccagaggacgggcagtgtcagtgtttacccaac
atggcggggccgcgctgctctgaccccgcccctcgctacttcctgcctccactggactac
ttcctgtatgaggcggagctcgctgctccgctgcagacaggaggctctcctcctcctcct
cccccgtctcctcctccttcttctcctctgctggacccggtggtttcccctcagtgcgag
cgcttctacagagaacacggttacgactttaagttcatgaacgggagagtggttctggtt
cggaggactcgacacctcgcccgccgctggaggcggggtcagcagagccgcctccctctg
gagccgggccacgccctgcagatcatcccccgtcaaaggacggttggtcagcccatcacc
tggaccggcctgggattggtcagggtgaaggagggggcggggcttaggttcactgtggac
aacctcccatcaccaatggattaccagctggttattcgttatgagtcagagcctccgtct
gattggctggcttcagtcagcatcgctacagtgtcaccgggcagcggcggctgcagcagt
gacccgacaggaagtacaagtctggttcttcctgccaactccaggtggggggtcctggac
tctggtctgtgtctcactgctggcgctcggtacttggtggacgtggtcttcagtaaactc
tccgggtcggacggctcacacatcctgatcgactcgctgggtctggtccgggctcctggt
gctgctcaggacttctgctcccagaggagcgttgactcttcgcagctcttcggctgcgtt
gggttgaacgtggagctcaatgcagacgagtcactgagagaagtgtgtgaaggactcatg
aagagcttgtcagcacgagtacacaacggagctgtgttatgcaggtgcaacgctgacggc
tctctcgggccgtcctgcagtaaactgggaggcttctgtgaatgtaaacccaacgtgatt
ggccgttgctgtgatacctgttcaccactgacgtttggtttcggacccgacggctgcgaa
ccgtgtgaatgtgaccctcagggggcgctgtcggagccgtgcgatcaggtcggaggtcaa
tgtgtgtgtcgctcagaggtcacaggtcgacgctgcgaccgctgccagactgcattctgg
ggattcccttcctgtcggccctgtcagtgccacgagctgtctgaagagtgtgaccaagaa
accggagagtgcctgaactgcaggcagcacgccaccggacccatgtgtgaaaggtgtgtg
gagggctacctcggtgacccgggctccgggcagccctgccagccctgcctgtgtccagaa
gttacaaacagcggacgattcttcgccacctcgtgccaacacgacccacaatccctcagt
ctcacctgtacctgcagggaggggcacgcaggtccacgctgcgacagatgcagccctggt
ttctatggcgacctgcggttgccaggcgcccgctgcatggcgtgcccctgcaacgacaac
ataaaccctgcagacccgacctcttgcgacagccagacaggagcatgtcaacgttgcctg
caccacaccacgggggcccggtgccaggactgcagacccgggtactacggggacgctctg
gaccaggactgcaaagagtgctcttgtgaccggcgggggacggaggtgacccagtgtcct
ttggggagtccttgtttctgtgactccaggacgggacagtgcccctgcaggacgggggtg
atgggcgccctctgtgacgagtgtgaggacgggtactggaacctggacggggcctcgggg
tgtcaggcctgcagctgtgattctgtcaactccttctccaacatgtgcagcaaggtgacg
ggtcagtgtccgtgtcggcccgagttcggagggaggcagtgtgacgagtgtggtgagaac
cacttcgggaacccggacctgcagtgcatctcttgtgactgtaacgtcgaggggacggag
cgcccgtcgtgtgaccctgaaaccggcgagtgcctctgtcgggtcggcgtcgccgggatc
ttctgtgacgagtgcgcccccgggtacgactcggtgttcccggcctgcggcgagtgccac
ccgtgcaacgtgctctggggcggagacgtggccgacgtgcaacgagccgcgctgaggatg
aggagcttcatccctcggcaccgcgacgacgacgacgtgcggaccggcgaccgccacctg
caacagatgctgaagatgcactcggcgctggacgacctcgccgcccagacgggacggtcc
cagccggacctgcaggagctggaggagctgtgtgccgagatccggaagctgcacaacgcc
atcgaccccaacgcgattgtgatcgacccgtctgctctcctgaacatggagatggacaat
gttgatctggagttcaggaagctgctgaacagcgtgaaggagaaacttctgcagagtcca
gacaaagaagaggaacacccggacgtgctgctggacgacatccagaagcttcatgagacc
ttcgtgttggacgagcagcgagtaaggaatgccaccaacgctgtggaggggtccatggac
cgcaggcaggaagtcaaacacaaactgaacatgtgcagcagcagaggagacctgatgctg
ctggagaagaaggtccaagagctcagcgtggccaatctcaaccgagcaatctgtggagga
ccgggtctggaggactgctcaggatgtggtggagctctgtgtggtctggatttgggaaaa
aggaaatgtggaggtccaaactgtgatggagtcattccagtcagtcagaaagcttcagag
acagcagagggagcgaaggagcaactcctcaccctcccatcccgtcttctggaggcccag
aacaagatcaacaatgtcaaacaacaagctgaggacactaaagaccaggccaaagacctc
caggaccagatccacaacaacatggactccctcaagagagagaaaaataaaagcaaggag
ctcatccagcaagtcaaagactacctcgtagatgagatggttcctccagaggacatcgag
aaaatggcccaagctgttctggccatccggctgccacgatcaccagatcagatgcaatca
ttgatcaatgacatcaacaatctgctgtccaaccccaacaacggccccgctgacctggag
gagcacaccaacaccgcccacaccctgctgcaggaagcccagcagctgcaggagcggatg
aagaacatcgacgtgaccgagatccgcagagatatttacggagcagagaacgctcaggac
aaagccaacgatgacctggacgccggcagccgggacaaagacgcggccggaagccgagtc
caagacatgaacaacaaactagccgacatcgacacaaagctgatgaatcgtagatctgaa
gatctgcagaaccagagcgaatatctcaggaggaaaacggagcagaacagagagacggcc
gaagagtccagagaggctgcagactctgcgttgaaccagaccactgacacagaaccagag
ctgcgagaggccatgaagcagtttgagctgctgaagcagaaacgctccggtcagctggct
ggagacgaagctggagaccgactgaggaagacgagggaggaggcccagaaagtgaaggaa
caggtggaggacaaactccaacagctgcaagatctggaccagaggatccagcagctgatc
cagaacaaagaggacaaagctgccgaggtcgccatcttgttagaagatgtggactcactg
aggagggagatctccaggagggccgacggatacgtcagctgcaccgcttag
DBGET
integrated database retrieval system