Clinocottus analis (woolly sculpin): 137799709
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Entry
137799709 CDS
T10471
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137799709 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137799709 (lamb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
137799709
NCBI-ProteinID:
XP_068452610
LinkDB
All DBs
Position
Unknown
AA seq
1818 aa
AA seq
DB search
MRVPQLSFLLVLQVFISAQDDVILPEFSSQDDVILPEFSSQDDVILPEFSSQDDVILPEF
SDVCTEGSCYPATGDLLIGRAHQLSSTSTCGRNRPEPFCIVSHLQEEKKCFLCDSSLPYD
ALTSPTSGHRIENVVTTFAPNRLKTWWQSENGVENVTLQLNLEAEFHFTHLIMTFKTFRP
AAMVIERSADFGQTWQLYRYFAYDCEASFPSVSQGPMQKVDDVICDSHYSDIEPSTEGEV
IFRVLDPVFRIDDPYSPRIQNMLKITNLRVKFTRLHTLGDNLLDSRMEIKEKYYYAIFDM
VVRGNCFCYGHASECAPIQGAGQTSEGMVHGHCMCNHYTKGLNCEKCQDFYHDLPWRPAE
GRNTNACKKCNCNQHSSSCHFDMAAFVASGNISGGVCDDCLHNTAGLNCERCQPFYYQHP
ERDARDPNVCQPCDCDARGSLNGGICDWTTDLRAGLIAGQCRCKDSVEGERCERCKQAHY
GMSAAPEGCKACTCSAVGTLPGGSSCDSETGNCFCKRLVTGRDCEQCVSEHWGLSNDMDG
CRPCDCDLGGAVNNQCDQVSGQCVCRDHMFGRRCDQVESGFYFIALDHYTYEAEDATFGP
GVTVVPRPHPVDRSPTWTGIGLVNVPEGAFLEFSVDNIPHSMEYDILIRYEPQLPDQWEE
VLMTLMRPGPITADSRCINTVPDDDHQMVSLHPGSRHVALPRAVCFESGLNYTVRLSLPL
YSALSDVLSPYTLIDSIVLMPHCKNLEIFSVSEGDSSGWETFQRYRCLESSQSIIKSPMT
DICRNFIFSISAMLHQGAKECHCDPQGSLSTMCDPNGGQCQCRPNVVGRNCDRCVPGTFQ
FGPNGCKACACDLQGSQRSFCDSLTGQCVCVAGAYGRQCDRCLPGHWGFPSCRPCSCNGH
ADDCDPDTGLCTACRDHSTGHTCDRCVEGYYGDPVLGSGEHCHACLCPDGPGSLRQFAGS
CYRGDDSQQVVCACSAGYKGSRCDECSPGYYGNPQEAGGRCQPCRCNNNIDASDPESCDG
RTGACLRCLHHSEGVACQSCKQGYYGNALLQDCRKCVCDALGSDSSGCAPPAGCPCERSS
GRCRCLPGVTGQRCDRCAADSWGLAGGRGCRSCDCAAEHSDGTSCNEVSGQCSCRPGFGG
RTCSECRERFWGDPEVQCHACDCDPRGVSELQCHKASGHCVCVDGVSGPRCDVCGRGFSG
TFPDCHRCHQCFAEWDAVIGQLTNQTHRLVNKVNAVKASGVSGPYRKSMESVERSVADVW
LVLNQNPASQPLTETQELLQQASDLMGALSQRLNLTEQTLVQVEDKDSAAEAELDSVTAD
AQKLERTVQELLDQVEFIKNSDIRGATDSVSKYLQKSLAAEVQANASTVDPGSAVETSSA
LRQLTEDKLNQTREEFLRRHTEHAQRLDDLAGELQTLDLSEVSHKTCGSPSSGQDSCGSS
PCGGLGCLDSEGRTRCGGDGCDGVVTRASSIWRKTRDSEKQILSAMEEVETLSQMVAEAK
EKADQVKLSAQDVLTKTNRTKQKVQQSNEELRALIRQIRNFLTQEAADLESIELVADEVL
AMQMPTTPAQLQNLTQDIRQQVGELGNVENLLQQSAADIQRAQNLLDQAQRAREEAAAVK
DSAEKVKLALEETERTQTAASSAIQQAAAHILTTNQLLSTVQLETGHAELKLSNATQRLQ
RLEQDVTLLRDKGLNVTESTERTNQDAASIRKVAEEVKKDLDLELKEKYSKVEQLIGQKA
EGVANAKKRAGSLQQEAKELLLKASDKLQLLKELEKSREDNQRTLEVKAEQLVELEAAVK
GLLQEISHKVTIYSTCLF
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcccccagctgtccttcctgctcgtcctgcaggtgttcatctccgctcaggat
gatgtcatcctcccggagttctcatctcaggatgatgtcatcctcccggagttctcatct
caggatgatgtcatcctcccggagttctcatctcaggatgatgtcatcctcccggagttc
agtgatgtgtgcacagagggcagctgttacccggcaacaggagaccttctgattggccga
gcccaccaactgtcatccacttccacctgtggaaggaaccgcccggaaccgttctgcatc
gtcagccacctgcaggaggagaagaagtgtttcctgtgtgactcttctttgccgtacgac
gcgctgaccagtccgaccagcggccatcgcatcgagaacgttgtcaccacgttcgctccc
aacagactgaagacctggtggcagtctgagaacggtgtggagaacgtcactcttcagctg
aacctggaggccgagtttcacttcacacatctcattatgaccttcaagacgttccgacct
gccgccatggtgatcgagcgctcggctgacttcgggcagacgtggcagctttatcggtac
ttcgcctacgactgcgaggcctcgttcccgtcggtgtcccaggggcccatgcagaaggtg
gacgacgtcatctgcgactcgcattactccgacatcgagccgtccaccgaaggagaggtg
attttcagagtgctggatccagtgttcaggatcgatgacccctacagccccagaatccag
aacatgttgaagatcaccaacctgcgggtgaagttcaccagactgcacacgctcggagat
aacctgctggactctcgcatggagatcaaagagaagtattattacgccatcttcgacatg
gtggtccgaggaaactgcttctgctatggacacgcctccgagtgtgccccgatccaggga
gccggccagaccagcgagggcatggttcacgggcattgcatgtgtaaccactacactaaa
ggcctgaactgtgaaaagtgtcaggatttctaccacgacttgccgtggagaccagccgag
ggacgcaacactaacgcctgcaagaagtgtaactgcaaccagcactcgtcctcgtgtcac
ttcgacatggccgcgttcgtggcttcaggaaacatcagcggaggagtctgtgacgactgt
ctgcacaacacggccggcctcaactgtgagcgctgccaaccgttttactaccaacaccca
gagagggacgccagggaccccaacgtctgccaaccttgtgactgtgacgctcggggttcg
ctgaacggaggaatctgcgactggaccacggacctgcgggccggtctaatcgctggtcag
tgtcgctgtaaagactccgtggaaggagagcgctgcgagcgctgcaagcaggcgcactac
gggatgagcgccgccccggagggctgcaaggcgtgtacctgcagcgccgtgggaacactt
cctggaggaagttcctgcgacagtgaaacaggaaactgcttctgtaaacgtctggtgacg
ggacgggactgtgagcagtgtgtgtctgaacactggggtctcagtaatgacatggatggc
tgcagaccatgtgactgtgacctgggaggagccgtcaacaaccagtgtgaccaggtgagt
gggcagtgcgtctgcagggatcacatgttcggccggcgctgcgaccaggtggagtctggg
ttctacttcatcgctctggatcactacacctacgaggcggaggacgccacgtttggaccc
ggagtgacggtggtcccaagaccccaccctgtggaccgcagccccacctggaccggcatc
ggcctggtcaacgtcccagagggagccttcctggagttctccgtggacaacatcccccac
tccatggagtacgacatcctgatccgctacgagcctcagctgccggaccaatgggaggag
gtcctgatgacgctgatgaggccaggaccaatcacagcggacagtcgctgcatcaacacc
gtgccagacgacgaccaccagatggtgtccctccaccccggatcacgacatgtggctctt
cccagagcagtttgctttgagtccggtctgaactacacggtccggctcagcctgcctctg
tactcggccctcagcgacgtcctgtctccttatacgctcattgactcgattgtgttgatg
cctcactgtaagaacctggagatcttctccgtatcagaaggagactccagtggctgggaa
acgtttcagcgttaccgttgtctggagagcagccagagcatcatcaagtcgcccatgacc
gacatctgcaggaacttcatcttcagcatctcagccatgctgcaccagggagctaaagaa
tgccactgtgatcctcagggctccctcagcaccatgtgtgaccccaatggcggtcagtgt
cagtgtcgccccaacgtggtcggcaggaactgtgaccggtgtgttccgggcacgttccag
tttggacccaacggctgcaaagcatgtgcctgtgaccttcagggttcacagaggtcgttc
tgtgactcgctgacgggtcagtgtgtgtgtgttgcgggagcgtacggtcggcagtgcgac
cgctgtctgccgggtcactggggtttcccctcctgccgaccttgctcctgcaacggacac
gccgacgactgcgaccccgacactggactctgcaccgcctgccgggaccacagcaccggg
cacacctgtgacaggtgtgtggaggggtactacggagacccggttctgggctcaggtgag
cactgccacgcctgcttgtgtcccgacggacccggcagcctgcggcagtttgcaggaagt
tgttaccgcggcgatgactcccagcaggtcgtctgcgcctgcagcgccggatacaaaggt
tctcgctgtgacgagtgctcacctggttactatggaaacccacaggaggcgggggggcgg
tgccagccctgccggtgcaacaacaacatcgacgcgtcggacccggagtcctgcgacggc
cggaccggagcgtgtctgcgctgcctgcaccacagcgagggcgtggcctgccagagctgc
aagcagggttactacggcaacgcgctgctgcaggactgcaggaagtgtgtgtgtgacgct
ctgggcagcgactcctccggctgtgctccccctgctggttgtccctgtgagcgcagcagc
ggtcggtgtcgctgcctccccggcgtcaccgggcagcgctgcgaccgctgtgcggccgac
agctggggcctcgcaggcgggcgcggctgccggagctgcgactgcgcagccgaacactcg
gacgggacgtcctgcaacgaggtcagcggccagtgttcctgtcggcccggcttcgggggc
agaacctgcagcgagtgcagagagcggttctggggagacccagaggtccagtgtcacgcg
tgtgactgtgaccctcgcggcgtctccgagctgcagtgccacaaggccagcggtcactgc
gtctgcgtggacggggtttcgggtccgcgttgcgacgtctgcggccgcgggttctccggc
accttccccgactgtcaccgctgccatcagtgcttcgccgagtgggacgccgtcattggt
cagctgaccaatcagacacaccgccttgtcaacaaggtcaacgccgtgaaagccagcggc
gtcagcggaccgtacaggaagtccatggagagcgtggagaggagcgtcgccgacgtctgg
ctggtcctgaaccagaacccggcctctcaaccgctgaccgagacccaggagctgctgcag
caggccagtgacctgatgggggccctgagccagaggttgaacctcactgaacagactctg
gtccaggtggaggacaaggactcggccgcagaagctgaactggactctgtgacggcggac
gcacagaaactggagcggacagttcaagagctgttggatcaggttgagttcatcaagaac
tccgacatcagaggggccacagacagcgtctcaaagtacctccagaagtctctggcggct
gaagtgcaagcgaacgcctccaccgtggatcccggcagcgccgtggaaacctccagcgct
ctacggcaactcacagaggacaaactgaaccaaaccagagaggagtttctgaggagacac
actgagcacgctcagagactggacgacctggccggagagctgcagacgctggacctgtcg
gaggtcagccacaagacctgcggcagcccgtcatcgggtcaggactcgtgcgggtcgtct
ccctgtgggggtctgggctgcctggactctgagggccggacccggtgtggaggcgacggc
tgtgacggcgtggtgacgagggccagcagcatctggaggaagacccgggactctgagaag
cagatcctcagcgccatggaggaggtggagaccctctcccagatggtagcggaggccaaa
gagaaggcggaccaggtgaagctgagtgctcaggacgtcctgaccaagaccaacaggacc
aagcagaaggtccagcagagcaacgaggagctgagagccctcatcaggcagatccggaac
ttcctcacacaggaagcagcagacctggagagcatcgagctggtggctgacgaggttttg
gccatgcagatgcccaccacgccggctcagctgcagaacctgacccaggacatccggcag
caggtgggagaactggggaacgtggagaacctcctgcagcagagcgccgccgacatccag
agagcacagaacctgctggaccaagcccaacgagccagagaggaagcagcagcagtgaag
gactctgcagagaaggtgaagctcgctctggaggaaactgagcgcactcagaccgccgcc
agcagcgccatccagcaggccgccgcccacatcctgaccaccaaccagctgctgtccacg
gtgcagttggagacgggccatgcagagttgaagctcagtaacgccacccagaggctgcag
aggctcgagcaggacgtcacgctgctgagggacaaaggtctgaatgtcactgagagcact
gaacgcaccaatcaggacgcagcgagcatcaggaaggtagcagaggaggtgaagaaggac
ctggacctggagctaaaggagaagtactccaaagtggagcagctgattggtcagaaggca
gagggcgtggctaatgcaaagaagagggcggggtcactgcagcaagaagccaaagagctg
ctgctgaaggccagcgacaaactgcagctgctcaaagagctggagaaatctcgtgaagac
aaccagcggactctggaggtgaaggcggagcagctggtggagctggaggcggctgtgaag
gggctgctgcaggagatcagccacaaggtcaccatctactccacctgtctgttctag
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integrated database retrieval system