Clinocottus analis (woolly sculpin): 137799744
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Entry
137799744 CDS
T10471
Symbol
nedd1
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cana03036
]
137799744 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cana04812
]
137799744 (nedd1)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
137799744 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
137799744 (nedd1)
Cytoskeleton proteins [BR:
cana04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
137799744 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_NOL10_N
WD40_Gbeta
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_VPS8
CFAP251_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
EIF3I
WD40_RFWD3
PAC11
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
DSE1_N
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Beta-prop_ACSF4
NBCH_WD40
Beta-prop_NWD2_C
PD40
Beta-prop_LRRK2
ASA1
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
137799744
NCBI-ProteinID:
XP_068452655
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MEEVTRLVSTGDSVRIWDSASMSPLEQFNPHSSSSPVAQACWSSNNQYLVSASSSGDKLV
VSSLKSSPVPVVELGDGKKQTCVCLSSSSQFLASGGLDHCVHIWDLKTKRLHRSLRDHKE
EVTCVSFNANDSYIASGSTSGDLVLHSLTTNLSSKAFGHGSNQPVHALRLSPLRRSLLGS
VSSSGTVVLWDSNTQKEIHVFEAAHKAPGSGLAFSPASELLVVSVGLDKKIVCYDTASKI
VLRSIRVDSPLTSVDFMPDGSGLVVGSTQGKIYQFDLRNSSAPTRVTNAHTTSVTCLRFQ
SSIKHKSSKLGSTKIIKRSSIKLSSSQTESAPSTSPAPLRQVTGTDLMSREAEGQQGAEP
LSVGDQFSSVGRSSLDVFSPAREDPVFQGSSGDTPFGKTHVTSLEMRSREEGGQQVVGRA
SLDIFSPVREDLTSHRKPPLGTPLVGAAARSYSPLSIFQTPPPIREEEPIPAAAAEPCDS
RKADKASSSSLEGEGQATPTVLQLANHSQPAPSFFTPEPSLRRTNGIQAQLSYGSPVQEA
AASSTAGLSAAVSSSLSQNIAEVVGQAGAAPLTSLQIHFIQNMIHETLEDFRDNCHRDIV
NLQVEMVRQFYIQLNEIHGLIEKYSVNESLVEEVERLKEENRRLKTNY
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacccgcctggtgtccacaggagacagtgtgaggatctgggactcggcc
tccatgtctcctctggagcagttcaaccctcacagcagcagcagcccggtggctcaggcc
tgctggagctccaacaaccagtacctggtcagcgccagcagcagcggagacaaactggtg
gtttccagcctgaagtcctctcctgtcccagtggtggagctgggcgacgggaaaaagcag
acctgtgtgtgtctgagctcctcgtctcagttcctggcgagcggcggtctggaccactgc
gttcacatctgggacctgaagaccaagagactgcaccgctctctcagggaccacaaagag
gaagtgacctgcgtgtccttcaacgccaacgacagctacatagcctccgggtccaccagc
ggagacctggtcctgcacagcctgaccaccaacctgtccagcaaggcctttggacatggc
agcaaccagcccgtccatgccctgagactgtcccccctgcggcgctccctgctgggcagc
gtctcttccagcggcaccgtggtcttgtgggactccaacactcagaaggagatccatgtt
ttcgaggccgcccacaaggccccgggctccggcctcgccttctcccccgccagcgagctg
ctggtggtcagcgtcggcctggacaagaagattgtgtgctacgacacggccagcaaaatt
gtcctgaggtccatccgggtggacagtcctctcacctcagtggacttcatgccagacggc
agcggcctggtggtcggctccactcaggggaagatctaccagtttgacctgaggaactct
agcgcccccaccagggtcaccaacgcacacaccacctccgtcacctgcctccgcttccag
agcagcatcaagcacaagtccagtaaactgggctccaccaagatcatcaaaagatcttca
atcaagctgtcaagcagccagacagagtccgcccccagcacaagccccgcccccctccgc
caggtgacaggaacagacctgatgtcccgggaggctgaaggccagcagggggcggagccg
ctttctgtgggtgaccagttcagcagcgtgggacggagcagcctggacgtcttctctcct
gctcgcgaagaccctgtcttccagggcagcagcggggacacgccctttggaaagacgcac
gttaccagtctggagatgcggtccagagaagaggggggtcagcaggtcgtcggccgggcc
agtctggacattttctccccagtcagagaagacttgacctcccaccgtaagccccccttg
gggactcctctggtgggcgctgcggcccgcagctacagcccgctgtccatcttccagacc
ccgcccccaatcagggaggaggagccaatccctgcagcagcagccgaaccatgtgactcc
agaaaggccgacaaggccagcagctccagccttgagggggagggccaggccacgcccaca
gtccttcaactggccaatcacagccagccagccccatccttcttcactccggagcccagc
ctgaggagaaccaatgggattcaagctcagctgagctacgggtctcctgtccaggaagct
gcagccagcagcaccgcaggtctgtcggcggctgtgtcctcatctctctcccagaacatt
gctgaggtggtgggtcaggccggagccgctcctctcacgtccctgcagatccacttcatc
cagaacatgatccacgagactctggaggacttcagggacaactgtcaccgggacatcgtc
aacctgcaggtcgagatggtccgacagttttacatccagctgaacgagatccacggcctg
atcgagaagtactcggtaaacgagtccctggtggaggaggtggagcggctgaaggaggag
aaccggcggctcaagaccaactactga
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integrated database retrieval system