KEGG   Clinocottus analis (woolly sculpin): 137799744
Entry
137799744         CDS       T10471                                 
Symbol
nedd1
Name
(RefSeq) protein NEDD1
  KO
K16547  protein NEDD1
Organism
cana  Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:cana00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cana03036]
    137799744 (nedd1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cana04812]
    137799744 (nedd1)
Chromosome and associated proteins [BR:cana03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     137799744 (nedd1)
   Microtubules and associated factors
    gamma-tubulin ring complex
     137799744 (nedd1)
Cytoskeleton proteins [BR:cana04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     137799744 (nedd1)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR5 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_EML Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_NOL10_N WD40_Gbeta WD40_MABP1-WDR62_1st Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_VPS8 CFAP251_N Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st EIF3I WD40_RFWD3 PAC11 Beta-prop_IFT140_1st WDR90_beta-prop_4th DSE1_N Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_ACSF4 NBCH_WD40 Beta-prop_NWD2_C PD40 Beta-prop_LRRK2 ASA1 KNTC1_N
Other DBs
NCBI-GeneID: 137799744
NCBI-ProteinID: XP_068452655
LinkDB
Position
Unknown
AA seq 648 aa
MEEVTRLVSTGDSVRIWDSASMSPLEQFNPHSSSSPVAQACWSSNNQYLVSASSSGDKLV
VSSLKSSPVPVVELGDGKKQTCVCLSSSSQFLASGGLDHCVHIWDLKTKRLHRSLRDHKE
EVTCVSFNANDSYIASGSTSGDLVLHSLTTNLSSKAFGHGSNQPVHALRLSPLRRSLLGS
VSSSGTVVLWDSNTQKEIHVFEAAHKAPGSGLAFSPASELLVVSVGLDKKIVCYDTASKI
VLRSIRVDSPLTSVDFMPDGSGLVVGSTQGKIYQFDLRNSSAPTRVTNAHTTSVTCLRFQ
SSIKHKSSKLGSTKIIKRSSIKLSSSQTESAPSTSPAPLRQVTGTDLMSREAEGQQGAEP
LSVGDQFSSVGRSSLDVFSPAREDPVFQGSSGDTPFGKTHVTSLEMRSREEGGQQVVGRA
SLDIFSPVREDLTSHRKPPLGTPLVGAAARSYSPLSIFQTPPPIREEEPIPAAAAEPCDS
RKADKASSSSLEGEGQATPTVLQLANHSQPAPSFFTPEPSLRRTNGIQAQLSYGSPVQEA
AASSTAGLSAAVSSSLSQNIAEVVGQAGAAPLTSLQIHFIQNMIHETLEDFRDNCHRDIV
NLQVEMVRQFYIQLNEIHGLIEKYSVNESLVEEVERLKEENRRLKTNY
NT seq 1947 nt   +upstreamnt  +downstreamnt
atggaggaggtgacccgcctggtgtccacaggagacagtgtgaggatctgggactcggcc
tccatgtctcctctggagcagttcaaccctcacagcagcagcagcccggtggctcaggcc
tgctggagctccaacaaccagtacctggtcagcgccagcagcagcggagacaaactggtg
gtttccagcctgaagtcctctcctgtcccagtggtggagctgggcgacgggaaaaagcag
acctgtgtgtgtctgagctcctcgtctcagttcctggcgagcggcggtctggaccactgc
gttcacatctgggacctgaagaccaagagactgcaccgctctctcagggaccacaaagag
gaagtgacctgcgtgtccttcaacgccaacgacagctacatagcctccgggtccaccagc
ggagacctggtcctgcacagcctgaccaccaacctgtccagcaaggcctttggacatggc
agcaaccagcccgtccatgccctgagactgtcccccctgcggcgctccctgctgggcagc
gtctcttccagcggcaccgtggtcttgtgggactccaacactcagaaggagatccatgtt
ttcgaggccgcccacaaggccccgggctccggcctcgccttctcccccgccagcgagctg
ctggtggtcagcgtcggcctggacaagaagattgtgtgctacgacacggccagcaaaatt
gtcctgaggtccatccgggtggacagtcctctcacctcagtggacttcatgccagacggc
agcggcctggtggtcggctccactcaggggaagatctaccagtttgacctgaggaactct
agcgcccccaccagggtcaccaacgcacacaccacctccgtcacctgcctccgcttccag
agcagcatcaagcacaagtccagtaaactgggctccaccaagatcatcaaaagatcttca
atcaagctgtcaagcagccagacagagtccgcccccagcacaagccccgcccccctccgc
caggtgacaggaacagacctgatgtcccgggaggctgaaggccagcagggggcggagccg
ctttctgtgggtgaccagttcagcagcgtgggacggagcagcctggacgtcttctctcct
gctcgcgaagaccctgtcttccagggcagcagcggggacacgccctttggaaagacgcac
gttaccagtctggagatgcggtccagagaagaggggggtcagcaggtcgtcggccgggcc
agtctggacattttctccccagtcagagaagacttgacctcccaccgtaagccccccttg
gggactcctctggtgggcgctgcggcccgcagctacagcccgctgtccatcttccagacc
ccgcccccaatcagggaggaggagccaatccctgcagcagcagccgaaccatgtgactcc
agaaaggccgacaaggccagcagctccagccttgagggggagggccaggccacgcccaca
gtccttcaactggccaatcacagccagccagccccatccttcttcactccggagcccagc
ctgaggagaaccaatgggattcaagctcagctgagctacgggtctcctgtccaggaagct
gcagccagcagcaccgcaggtctgtcggcggctgtgtcctcatctctctcccagaacatt
gctgaggtggtgggtcaggccggagccgctcctctcacgtccctgcagatccacttcatc
cagaacatgatccacgagactctggaggacttcagggacaactgtcaccgggacatcgtc
aacctgcaggtcgagatggtccgacagttttacatccagctgaacgagatccacggcctg
atcgagaagtactcggtaaacgagtccctggtggaggaggtggagcggctgaaggaggag
aaccggcggctcaagaccaactactga

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