Clinocottus analis (woolly sculpin): 137799789
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Entry
137799789 CDS
T10471
Symbol
prdm11
Name
(RefSeq) zinc finger protein 862 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137799789 (prdm11)
Transcription factors [BR:
cana03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
137799789 (prdm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
SET
Zn_ribbon_PRDM4
FOG1-like_PR
Dimer_Tnp_hAT
DUF7822
DUF6448
Motif
Other DBs
NCBI-GeneID:
137799789
NCBI-ProteinID:
XP_068452717
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MSEPPLDLWFCEDCQDYFQEECPSHGPPLFVPDTPAAPGSANRAALTIPSGLEVFTEGDC
VDIRCLDSNFPKGAVFGPYEGELVSKDKSSGFFSWIVVDFNNTYQSIDGSDETKANWMRF
VRTSPEESVRNLTAFQRGRNIFFRVSRALEAGEKLRVWYSDDYIQRLHCVSQDSIHRNLD
SDTGKLTVSNIQEDFKSPCLQSVLQGKASPGKQASEDSDGQPPAKRKKIDLIFKDVLEAS
LEDSDKSSSQPSIHGECKAAALGSDGGLNVPNLKVEEKEEESQSGEEPSTSFCPNCVKLK
RRIQELEEELSRTREDKGDAVGPPMSGRTLTQRDQAPPHPEQGPIEDFQVMEPLTPTRVV
LDEDDPDVDSADDSIAADLVISPEDSLKLSTGGGRRIRRFKQEWLKKFWFLRYSATINEM
WCHVCRQYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCK
NMTLLFNAAYHLALEGRPFSDLRPLAELLKRCELKVVDQYMNDGDCQILLHHIARALKED
LAEKMRLSPFLSVIMDAQNDDLFSDMVAVYVQFVTNEGFPNTEFLSLQRLSVASVDGYLQ
AMDRAFGVLGLRFQDLLVVGLGVDGTNISSGMRANLYIAVQKTFPWILCLPIMIHRPHLE
VLDAISGKELTCLEDLENNLKQLLSFYRYSPRMMAELRSTAPTLSEETEFLGDIRAIRWI
IGEPNVLNALIKDYLEVVAHLKEISSQTQRADAAAIALTLLQFLMDYQSVKLIYFLLDII
AVLSRLAFTFQGEYLLVSRVEAKIEEAIQEIGQLVDCPGEYLQEFEENFRESFNGVALKN
LRVAESKFQSIREKICNRSQGILSQRLDLQSRTFAKACKVLDLSTWPHNREDLQAYGLEE
IQAIFNHLDSIPCGGQEGSHARTEARGSLVVEWKDLKADYYSMNGFKEVIGHVCRYKQRF
PLLNRIVQVVRVLPSSTACCDKGRGSLQKMCRNNRSRLTLEQMNDLLTVAVNGPPMANFD
GKRALDSWFEEKSGSSYSLSAEVVNRMSGDDQKSVLHSVDVNTEFYPDV
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagccgccgttggacctctggttctgtgaggattgccaggactatttccaggag
gagtgtccgtctcacgggccgccgctgttcgtccccgacacgcccgcggccccggggtcg
gccaacagggcggcgctcaccatcccgtcgggcctggaggttttcaccgagggggactgc
gtggacattcgctgcctggattcaaacttccccaagggggcggtgtttggcccgtacgag
ggagagctggtgtccaaggacaagtcctccggcttcttttcctggatagttgttgatttt
aacaacacgtatcagtccattgatggcagcgatgagaccaaagccaactggatgaggttt
gtccggacctcgcctgaggagagcgtcaggaacttgacggcatttcaacgcggtagaaac
atcttcttcagagtgagccgggccctagaggccggagaaaagctcagggtttggtacagc
gacgactacatccagcgcctccactgtgtctctcaggacagcatccaccgcaacctggac
tcagataccgggaagctgacggtctccaacattcaggaggactttaaatctccctgcctg
cagtccgttctgcagggcaaagccagccccggcaaacaagccagcgaagactcggacggc
cagcctcccgccaagaggaagaagatcgacctcatcttcaaagacgtcctggaggcttcg
ctagaggactccgataagtccagttcacagccttctatccacggtgagtgcaaagcagca
gcgctcgggtccgacggcggcttaaacgttccaaacctgaaggtggaggagaaagaggaa
gagagccagagcggcgaggaaccctccacctccttctgccccaactgtgtcaaactgaag
aggaggatccaggagctggaggaggagctgtcccgtaccagagaggacaagggggacgcg
gtcggtccaccgatgtctggacggaccctgacccaacgagatcaggccccgccccatcct
gagcaaggccccattgaggattttcaagtgatggagcccttgacgcccacccgggtggtt
ctggatgaagacgacccagacgtggactcagccgatgactccattgctgcagatcttgtg
atttctccagaagactcattgaaactttccaccgggggaggccgacggattcgtcgcttc
aagcaggagtggctgaaaaagttctggttcctacgctactcggcaactatcaacgagatg
tggtgccacgtctgccgccaatacacagtccagtcatcccgcacctctgccttcatcatc
ggctccaagcagtttaagatccacaccatcaagctccacagccagagcaaccttcacaag
aagtgtttgcagctgtacaagctgcgcatgcatccggaaaagacggaagaaatgtgcaaa
aacatgacgctgctgttcaacgctgcgtaccacctggccctggaggggcggcccttctcg
gacctccgtccgctggcagagcttctgaagaggtgcgagctcaaagtggtggaccagtac
atgaatgatggggattgtcagatcctcctccaccacatcgcccgggctctaaaagaagac
ctggctgagaagatgcgcctctctcccttcctaagcgtcataatggacgcccaaaatgat
gaccttttctcagacatggtcgcagtctacgtccagtttgttaccaacgagggcttcccg
aacaccgagttcctgtccttgcagagactgagcgtggccagtgtggacggatatctccaa
gctatggatcgagcctttggtgtcctaggcctgaggttccaggacttgctggtggtgggt
ctgggggtagacggcaccaacatctcctcaggaatgagagccaacctgtacatagctgtc
caaaagacttttccttggatcctctgtctccctatcatgatccatcggccccatctggag
gtgctggatgccatcagtgggaaggagctcacctgtctggaggatctggaaaacaatctc
aagcagctcctcagtttctaccgctactcccctcgcatgatggccgagctgcgatccact
gctccgaccctgtcggaggagaccgagttccttggagacattagagccattcgatggatc
atcggagagccaaacgtcctcaacgcgctcatcaaagattacctggaggtagtcgcacat
ctgaaggagatcagcagccagacgcagagggctgacgccgcagccatcgctcttaccctc
ctccagttcctcatggactatcagtcagtaaagctcatctacttcctcctggacatcata
gcggttctctcacgattagccttcaccttccagggagagtacctgctggtgtcacgggtg
gaagccaagatagaggaggccattcaagagatcggtcagctggtggactgccccggagag
tatctgcaagaattcgaggaaaatttccgggaaagttttaacggtgtcgctctgaagaac
ctgcgagttgctgagtctaagtttcagtccatcagggaaaagatctgtaacaggagccag
ggcatcctgtctcagaggctggacctgcagagccgcacatttgccaaagcctgcaaggtc
ctggacctgtcgacctggccccacaaccgggaggacctccaagcttacgggctggaggaa
atccaggcaatattcaaccacctggactccatcccctgtgggggtcaggagggctcccat
gccaggacggaggccaggggcagcctggtggtggaatggaaggacctgaaagcagactac
tacagtatgaacgggtttaaagaggtcatcggtcacgtctgcaggtacaagcagcgcttt
cctttgctaaatcgcatcgtgcaggttgtccgggtcctgcccagttccacagcctgctgc
gataaaggccgagggtctctgcagaagatgtgtcggaacaatcgctcgcgcctgactctc
gagcagatgaacgacctgctgaccgtggcggttaacgggccgcccatggccaactttgac
gggaagcgagcgctggacagctggtttgaggagaagtccggcagcagttactctctgtcc
gccgaggtggtgaacaggatgtcaggcgacgaccaaaagtctgtcctgcacagcgtggac
gtcaacacagagttctaccccgacgtgtaa
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integrated database retrieval system
