Clinocottus analis (woolly sculpin): 137799897
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Entry
137799897 CDS
T10471
Symbol
pou6f1
Name
(RefSeq) POU domain, class 6, transcription factor 1
KO
K09368
POU domain transcription factor, class 6
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cana03000
]
137799897 (pou6f1)
Transcription factors [BR:
cana03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
137799897 (pou6f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pou
Homeodomain
Collagen
LRR_EndoS
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
137799897
NCBI-ProteinID:
XP_068452854
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MNSQDPPAKDAPLTVNEQVIVMSSHETIRVLEVEVDASLPSSAPDGKSEVKAEEGAARPA
DQTEADGSQDGPSLPQSTAGGVLSERQVVSVEVPAPAVQALTPAVPVSLSLSQPQATATA
AAAAAAAMPITVQGCPQVLTQESLATLMTGMMAQNGSLGQPLLIPLSMAGSIGGQGGLAV
LTIPTTNIATLPGLAAANTAANTAGNLFKLPFAGLQAATVLNSVQPQLQTNAQTMFQPQA
AVQVTSHPTQVTNTQVTAAQVVAAAAQAAQAATTVSQSNISLAALQTAGLSINPAIINAA
SLGTQPQFLSSLTSTPFITSAMSNMAGITSQLITNAQGQVIGTLPLLLNPASLAGAAGTP
TLQGLQGLQGLQGLQGLQGLQGLQGLQGLQGLQGLQSLQGLQGLQGLQGLQGLQLQTVTP
QLLVNSQGQIIATVGNGSAVVTSAAVLPKAAAPPTLTKPITQASVTTVSQSPIVIAPQPS
VLKNAAALSSAVPITCGDVAKVGQLVSKPQQVVSGEEGINLEEIREFAKTFKIRRLSLGL
TQTQVGQALTATEGPAYSQSAICRFEKLDITPKSAQKLKPVLEKWLAEAEHWNQKGQQNL
MEFVGGEPSKKRKRRTSFTPQAIEVLNSYFEKNALPTGQEITEIARELNYDREVVRVWFC
NRRQTLKNTSKINVFQVQ
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaactcccaggacccccctgccaaagatgccccactcacagtcaacgagcaggtcatc
gtgatgtccagccatgagactattcgtgtgctggaggtggaggtcgatgcgtctctgccg
tcatcagcgcccgatgggaagagcgaagtcaaagccgaggagggagcggctcggcccgcg
gatcaaaccgaggccgacggctcgcaggacggcccctctctgccccagagcactgcggga
ggagtgctgagtgagcggcaggtggtgtccgtcgaggttcctgcccctgctgtccaagcg
ctgactcctgctgttcccgtcagtttgtccctgtcgcagccccaagccaccgccaccgcc
gccgccgccgccgccgccgccatgcccatcactgtacaaggctgtccacaggtgctgacc
caggaaagtttggccacgctgatgaccggcatgatggcccaaaacggatctctggggcag
cccttgctcatccctctcagcatggcgggctccatcgggggccagggcggtctggcggtt
ctcaccataccgaccaccaacatcgctacgctgcccgggctagcagccgctaacacggca
gctaacacagctggaaacctcttcaaactgcccttcgctggcctccaagctgcgacagtc
ctgaactctgtccagccccaactgcagaccaacgctcagacgatgttccagcctcaagcc
gccgttcaggtcacgtctcatccgacacaggtgaccaacacacaggtcaccgccgctcag
gtggtggcggcggcggcccaggcggcccaggcggccaccaccgtctctcagtccaacata
tcgttagcagcgctccagaccgcggggctctctatcaatcctgccattatcaatgctgcg
tctctgggaactcagccccagttcctcagttccctcacatccactcctttcatcactagc
gccatgtccaacatggctggcatcaccagccagctcatcacaaatgctcaaggacaggtc
ataggaaccctccctcttttgttgaacccagcctctctggctggagcggctgggacaccc
accctccagggcctccagggtctccagggcctccagggcctccagggtctccagggcctc
cagggcctgcaaggtctccagggcctacaaggcctgcaaggtctgcaaagcttgcaaggt
ttgcaaggcctgcagggtctccagggtctgcagggtctccagctccagaccgtcacccca
cagctgctcgtcaactcccagggtcagattatcgccactgtcgggaacggatctgcagtc
gtgacttctgctgcggttctgccaaaagctgccgctcccccaacacttaccaaaccaatc
acacaggcgtcagtaacgactgtcagtcagtcaccgattgtcatcgcccctcagccgtct
gtactgaagaatgccgccgcgctatcctccgccgtgcccatcacctgtggagacgtcgca
aaagtgggacagcttgtcagcaaaccgcagcaggtcgtcagcggcgaggagggcattaat
ctggaagagattcgagagttcgccaagacgttcaagatccgtcggctgtccttggggctc
acacagacgcaagtggggcaggcgctcactgcgacggagggtcctgcctacagccagtcg
gccatttgcaggtttgaaaagctggacatcacgcccaagagcgctcagaagttgaagccg
gtgttggagaagtggctggctgaggcggagcactggaaccagaagggccagcagaatctg
atggagttcgttggcggcgaaccgtctaaaaagcgcaagcggcgcaccagtttcaccccg
caggccatagaagttctcaactcctactttgagaagaacgcgctgccgacgggtcaggag
atcacagagatcgcgagagagctgaactacgaccgggaggttgtgcgcgtttggttctgt
aaccggcggcagacgctgaaaaacaccagcaaaatcaacgtcttccaggttcagtaa
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