Clinocottus analis (woolly sculpin): 137799952
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Entry
137799952 CDS
T10471
Symbol
clstn1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cana04515
]
137799952 (clstn1)
Cell adhesion molecules [BR:
cana04515
]
Cadherins
Cadherin related
137799952 (clstn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
FAM176
Laminin_G_2
Cadherin_C_2
EphA2_TM
V_ATPase_I
PFF1_TM
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
137799952
NCBI-ProteinID:
XP_068452969
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MRFRGNTRSASAAVGLVLGLLCAVEAAKVNKHKPWIETTYHGIVTENDDKVLLDPPLIAL
DKDAPLRYAESFEVTLTEEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQK
EHTFTIQAYDCGEGPDGANMKKSHKATVHIQVNDINEYSPVFKEKSYKATVIEGKKYDSI
LKVEAVDADCSFQFSQICNYEIVTPDVPFTVDKDGFIKNTEKLSYGKERMYKLTVTAYDC
GKNRASEDVLVKISVKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCDEPITSIRAN
IDLETNHIGKGCDRDTYSEKSLHKLCGASSGTVELLPAPSSAANWTVGLPTDNGHDSDQV
FEFNGTQAIKVPDGLVSTSLKEPFTLSVWMRHGPGAHEKETILCNSDKTEMNRHHYSLYV
HNCRLILLMRQDPSEAENYKPAEFHWKLDQACDKEWHHYVLNVEFPTVSLFVDGTTFEPF
LVTEDYPLHSTKIESQLTIGACWQDNSGHDNDTESVSEPTSGGNARMAQFFRGNLAGLMI
RSGKLENKKVIDCLYTCKEGLDVQLPEEVASAVKVEFNPNQSSLTVEGDDIDAFDKVMQH
ISYLNSRQFPTPGIRHLRISTTVKCFNEESCVTVPDAEGYVMVLQPEEPKISLSGIDHFA
RSAAEFESQEGVTLFPELRIVSTITREVEADTEPEAAEGADDDPTVQETVVSEEIMHNLD
TCEVSVVGDELDGEHEGLEVDMSQLQQHGLEMSSSNLGLVVTGVNTMANYEQVLHLIRYK
NWHTEALFDRKFKLVCSELNGRYISNDFKVEVNVIHTANPVEHANAMVQPNFINPVHHAS
VDLSGHNLVNAHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQRTVGDQENGKEN
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEEESEDGEEEDDITSAESESSEDEEGAEP
EDQQGASRQQQLEWDDSTLTY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcggttccgagggaatacacgatctgcatccgctgctgtcggactggtcctcggacta
ttatgtgcggtggaggcagcgaaagtcaataagcacaaaccatggatcgagacgacatac
cacgggatcgtaacggaaaacgatgacaaagtacttctggaccctcctctaattgcactg
gacaaggatgctcctcttcgctatgcagagagttttgaggtgaccctcaccgaagaaggt
gagatttgcggcttcaggatccacgggcagaatgtccccttcgaggcagttgtcctcgac
aagtccactggcgagggcgtcatccgagccaaggacaagctggactgcgagctgcagaag
gagcataccttcaccatccaagcctacgactgtggagagggccccgatggcgccaacatg
aagaaatcccacaaggccaccgtccacatccaggtgaacgacatcaatgagtattcacca
gtgttcaaggagaagtcctacaaagccaccgttatcgaggggaagaagtacgacagcatc
ctgaaggtggaggcggtggacgctgactgctcgttccagttcagtcaaatctgcaactac
gagatcgtcactcccgatgtgcccttcaccgttgacaaagatggcttcatcaagaacaca
gagaaactgagctacggcaaagagcgcatgtacaaactgactgtgacggcctacgactgt
ggaaagaaccgtgcatccgaggacgttctagtcaagatcagcgtcaagcccacctgcaaa
cccagctggcaaggcttcaataagaggattgaatatgagcctggcacagggagccttgct
cttttcccaagcatgcacttggagacctgcgatgagccaatcacgtccatccgcgccaat
atcgacctggaaaccaaccacattggcaagggctgcgaccgtgatacctactctgagaag
tccctgcacaagctgtgtggagccagctccggcaccgtggagcttctgccggcacccagc
agcgccgcaaactggacggtaggtctgcccactgataacgggcacgacagtgaccaggtg
tttgagttcaatggcacccaggccatcaaggtccccgatggcctggtgagcaccagcctg
aaggagcccttcacgctctccgtgtggatgagacatggccccggggcccacgagaaggag
accattctctgcaactctgacaagacagagatgaacagacaccactactcgctgtacgtc
cacaactgcaggctgatcctgctcatgcgccaggatccctcagaggcagagaactacaag
ccagccgagtttcactggaagctcgaccaggcgtgtgacaaagagtggcaccactatgtg
ctgaatgtggagttccccactgtgtctctgtttgtggatggcactacatttgagcccttc
ctggttacagaggactacccactgcactccaccaagatcgaatcccagctcaccattggt
gcctgctggcaagacaactcaggacatgacaatgacactgagtcagtctctgagcccacc
tcaggtggaaatgctagaatggctcagtttttccgggggaacctagcggggctgatgatc
cgctctggcaagctggagaacaagaaggtgattgactgtttgtacacctgcaaggaagga
ctggacgtgcagctgcctgaggaagtggcttcagctgtcaaggttgagttcaaccccaac
caatcctctctgaccgtggagggcgacgacattgatgccttcgacaaggtcatgcaacac
atctcctacttgaactcccgccagttcccaacccctggcatcaggcacctccgcatctcc
accaccgtcaaatgcttcaacgaggagtcctgcgtcacagtgccagatgcagaaggttat
gtgatggtgctgcagcctgaagagcccaagatcagcctgagtggcatcgaccactttgcc
cgcagcgctgccgaattcgagagccaggaaggtgtgacgcttttccccgaacttcgcatt
gtgagcaccatcacccgcgaagtggaggccgacactgagcctgaagcggcagagggagct
gatgatgacccgacggtccaagagacagtggtgtcggaagagatcatgcacaacctggac
acatgtgaagtgagtgtggtgggagacgagctggacggggagcacgagggcctggaggtg
gacatgtcccagctgcagcagcacggcctggagatgagttcctctaacctgggcctcgtc
gtcaccggtgtgaacaccatggccaactacgagcaggtcctgcatcttatccgctacaag
aactggcacaccgaggcactcttcgacaggaaattcaaactggtctgctccgagctcaac
ggccgctacatcagcaatgacttcaaagtcgaggtgaatgtcatccacacagccaatccc
gtggagcatgccaatgccatggtgcagcccaatttcatcaaccctgtgcatcacgcctct
gtggatctgtccggtcacaacctggtcaacgctcaccaggcctcagttgtccccagcgcg
gccaccattgtcattgtggtgtgcgtcagcttcctggtgttcatgatcatcctgggcgtg
ttccgcatccgcgccgctcaccagcgtaccgtgggagaccaggagaacggcaaggagaac
gagatggactgggacgactcagccctcaccatcaccgtcaaccccatggagacgtacgag
gaccagcacagcagcgaggaggaggaggaagaggaggaggagagcgaggatggagaggag
gaagatgacatcacgagcgctgagtcagagagcagcgaagacgaggagggcgcggagcca
gaggaccagcagggggccagcagacagcagcagctggagtgggacgactccactctcact
tactaa
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