KEGG   Clinocottus analis (woolly sculpin): 137800000
Entry
137800000         CDS       T10471                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cana00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137800000 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cana03041]
    137800000 (bcas2)
   03400 DNA repair and recombination proteins [BR:cana03400]
    137800000 (bcas2)
Spliceosome [BR:cana03041]
 Complex B
  Other components
   Prp19 complex
    137800000 (bcas2)
 Complex C
   Prp19-CDC5 complex
    137800000 (bcas2)
DNA repair and recombination proteins [BR:cana03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    137800000 (bcas2)
SSDB
Motif
Pfam: BCAS2 Sterile RRP36 THOC7
Other DBs
NCBI-GeneID: 137800000
NCBI-ProteinID: XP_068453062
LinkDB
Position
Unknown
AA seq 225 aa
MAGTASVAGEVFVDALPYFDQGYDAAGVREAAAALVEEETRRYRPTKNYLSYLQTPDFTT
FETEIMRNEFERLSARQPMDLLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQYGTNAWKVYNDNLAFMIEMAQKELQKFRKQIQDLNWQRKNDQLAGGAKLRE
LESNWVSLVSKNFEIERAIIQLENEVTQLRQQQGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggctggaacggcttcagtagctggcgaagtgtttgtcgatgcgttgccgtattttgac
caaggttacgatgccgcaggtgtccgagaagcggctgcagcgttggtggaggaggagacc
agaagataccgacctactaagaactacctgagttacttgcaaacacctgacttcactact
tttgagacggaaatcatgaggaatgaatttgagcggctatcggctcggcagcccatggat
ctcctgagcatgaagagatatgagctgccagccccttcgtcgggacagaagaacgacatc
acagcgtggcaggagtgtgtgaacaactcgatggcccagctcgagcaccaggcagtccgc
attgagaacctggagctcatgtcacagtatgggaccaacgcatggaaagtctacaacgat
aacttggccttcatgattgagatggctcaaaaggaactccagaagttcaggaagcaaatt
caggatttaaactggcagcgtaagaacgatcagttagccggaggagccaaattgcgagag
ctggagtcaaactgggtgtctttggtcagtaagaactttgagatcgaacgggccatcatc
cagctggagaacgaagtaactcagctcaggcaacagcagggtgacgagaacaaggagaac
atacgccaggacttctag

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