Clinocottus analis (woolly sculpin): 137800015
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Entry
137800015 CDS
T10471
Symbol
hnrnpa1b
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1b
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137800015 (hnrnpa1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137800015 (hnrnpa1b)
03041 Spliceosome [BR:
cana03041
]
137800015 (hnrnpa1b)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
137800015 (hnrnpa1b)
mRNA cycle factors
Common to processing body (P body) and stress granule
137800015 (hnrnpa1b)
Spliceosome [BR:
cana03041
]
Common components
Common spliceosomal components
hnRNP proteins
137800015 (hnrnpa1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
137800015
NCBI-ProteinID:
XP_068453095
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MGMKGELAKQLGSRLGSSDADPFFLISPQGVFKDSPANMSKDVPREPEQLRKLFIGGLSF
ETTDESLRAHFEQWGSLTDCVVMRDPNTKRSRGFGFVTYSSVDEVDAAMSARPHKVDGRV
VEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHLRDYFSQFGKIEVIDIMTDRNTG
KKRGFAFVTFDDHDSVDRIVIQKYHTINSHNCEVRKALTRQEMQTTGMGRSSSGGGGGRP
YDYDRGFNQGGRGRYGDSPYNCNGGDGGNGGGGGGYGGGPGGPGGYNNGGNRGYNQGYNQ
GGGGGGGGGGGYGGNGYDSNGYGNCGGGSGGGGGGNNYNNMGHYDPQASNFGPMKNNFGG
GGGGVSRNFGGGGGGSSGGYGGGSNNGGYGRSGRF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgaaaggcgaacttgctaagcagttaggatccaggcttggttcgtctgacgca
gatcccttttttctgatcagtccgcaaggagtcttcaaggattcacctgcaaacatgtcg
aaagatgtcccacgtgaaccggagcagcttcgcaagctgttcattggaggcttgagcttc
gagactacagacgaaagcctgcgtgctcattttgagcaatgggggagccttacagactgc
gtggtcatgagggatcccaacacgaagagatcaaggggctttggctttgttacatattca
tctgtggatgaagttgatgctgccatgtctgcccgcccccacaaggttgatggcagagtt
gttgaaccaaaacgagcagtttctagagaggactcaaaccggccaggtgcccacgtaacc
gtgaaaaagatcttcgttgggggcatcaaggaagatacagaagagtcccacttgcgagat
tatttctcacaatttggcaaaatcgaagtcattgatatcatgactgaccgtaatactgga
aagaagaggggctttgcctttgtgacctttgatgatcatgactcggtcgacaggatcgtc
atccagaaataccacacaatcaactctcacaactgtgaggtgaggaaggctcttacaagg
caggaaatgcagactacaggaatgggccgcagcagcagcggaggtggcggtggaaggccc
tatgactatgacagaggcttcaatcagggaggccggggtagatatggggacagtccttac
aattgcaatggaggtgacggcggtaatggaggcggcggtggtggttatggaggtggtccc
ggcggtcctggaggctataacaatggtggcaaccgaggatataaccaaggttacaaccag
ggcggtggaggaggcggtggtggcggcggtggttatggaggaaatggctatgacagcaac
ggctatggtaactgtggtggaggcagcgggggtggtggcggtggaaataactacaacaac
atgggacactatgacccccaggcctccaattttgggccaatgaaaaacaactttggtggt
ggcggcggtggagttagcaggaactttggaggtggtggtggtggcagcagcggaggctat
ggtggcggctcaaacaatggtggatatggccgttcaggacgtttctaa
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