Clinocottus analis (woolly sculpin): 137800154 Help Entry 137800154         CDS       T10471                                  Name (RefSeq) collagen alpha-1(II) chain-like   KO K19719   collagen type II alpha Organism cana  Clinocottus analis (woolly sculpin) Pathway cana04510   Focal adhesion cana04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:cana00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     137800154  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     137800154  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:cana00536]     137800154 Glycosaminoglycan binding proteins [BR:cana00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    137800154 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC Amnionless Motif Other DBs NCBI-GeneID:  137800154 NCBI-ProteinID:  XP_068453299 LinkDB All DBs Position Unknown AA seq 1482 aa AA seqDB search MFSFVDSRTVLLLVASQVVLLSVVRCQEDDQEAGGCIQDGLQYNDKDVWKPEPCRICVCD SGAVLCDEIICEEIKECADPLIPSGECCPICPADAKTFGAQGQKGEPGEISDVVGPTGPQ GPMGPSGVQGGRGEAGAKGDKGNIGPRGRDGEPGIPGNPGAAGPPGPAGLGGNFAAQMAG GFDEKSGGAQMGVMQGPMGPMGPRGPPGPSGAPGPQGFQGGPGEAGEPGPAGSLGPRGPS GASGKPGSDGEAGKPGKSGERGPAGPQGARGFPGTPGLPGIKGHRGHNGLDGAKGETGAA GAKGESGSSGENGAPGSMGPRGLPGERGRSGAAGAAGARGNDGLPGPAGPPGPVGPAGAP GFPGSPGSKGEAGPTGGRGTEGAQGPRGEAGTPGSPGPSGASGNPGTDGIPGSKGSAGGA GIAGAPGFPGPRGPPGPQGATGPLGPKGQSGDPGLTGFKGEAGPKGELGPIGPLGAPGPS GEEGKRGARGEPGTAGPLGPPGERGAPGNRGFPGQDGLAGAKGAPGDRGVPGAGGPKGVG GDPGRTGESGLPGARGLTGRPGDVGPQGKVGASGASGEDGRPGPPGPLGARGQPGVMGFP GPKGANGEAGKAGEKGLVGRPGLRGLAGKDGETGPTGSSGPAGPAGERGEQGQAGPSGFQ GLPGPSGAPGESGKPGDQGISGEGGVPGAVGPRGERGFPGERGGAGAQGLQGPRGVPGTP GSDGPKGAIGPSGSAGSQGPPGLQGMPGERGNGGITGAKGDRGDNGQKGPEGASGKDGGR GLTGPIGPPGPSGPNGAKGETGITGPTGATGVRGAPGDRGEVGPHGPAGFAGPPGSDGQP GAKGELGESGQKGEGGSPGPQGPSGAPGPVGPTGVSGLKGARGAQGAAGATGFPGAAGRV GSPGPNGNPGSAGPAGAPGKDGPKGARGDAGLTGRQGDAGLRGPIGLQGEKGEAGTIGQP GVDGPTGPSGLVGSRGIVGLPGQRGERGFAGLPGPSGEPGKQGGSGSSGDRGPPGPVGPP GLTGPSGETGREGTPGSDGPPGRDGSLGVKGERGNTGPIGAPGSPGAPGSTGPVGPLGKQ GDRGEGGAQGPAGPSGPSGARGMAGPQGPRGDKGESGEAGERGQKGHRGFTGLQGLPGPP GSAGDSGAAGPAGSSGAKGPAGPSGPAGKDGSNGQLGPIGPPGPRGRSGESGPAGPPGNA GPPGPPGPPGPGIDMSAFAGMGQIEKSPDPLRYMRADEASSSLRQHDVEVDSTLKTLNSQ IENLRSPDGSQKNPARTCRDLKLCHPEWKSGNYWVDPNIGSIADAIKVFCNMESGETCVS ASIPEVPKKNWWTSKGNDRKHVWFGETMNGGFHFNYAEDGSVANAASVQLTFLRLLSTEA SQKLTYHCKNSIAYMDQAAGNLKKGLKLQGANDVELRAEGTSRFTYTVLEDGCKKHTDRW GKTVFEYKTQKTSRLPIVDIAPMDIGGADQEFGVEVGAVCFL NT seq 4449 nt NT seq  +upstreamnt  +downstreamnt atgtttagctttgtggattcaaggactgttctgctacttgtagcatcccaagttgtttta ctatccgtggtcagatgtcaggaggacgaccaggaggcaggcggctgcatccaggacggc ctgcagtataatgataaggatgtgtggaagcccgagccgtgtcgcatctgtgtgtgcgac agcggagcggtgctgtgtgatgagataatctgcgaggagatcaaagaatgtgccgaccct ctcatcccatctggagagtgctgtcccatctgccctgctgatgccaagacgtttggtgct cagggccaaaaaggtgaaccaggagagatttcagatgttgtcggaccaacaggaccacag ggcccgatgggcccctcaggtgtccagggaggacgcggagaagctggcgctaagggtgac aagggaaatatcggacctcgtggaagagacggtgagcccggcatccctgggaaccccgga gccgccggcccacccggaccagcaggactcggagggaactttgctgctcagatggctgga ggttttgatgagaagtctggcggcgctcagatgggcgtgatgcagggccccatgggtccc atgggcccccgcggcccccctggacccagtggagctcctggcccacaaggtttccaaggc ggccctggagaggcaggagagcctggtcccgctggatcattgggacctcgtggaccatct ggagcttctggaaaacctggaagcgatggtgaggccggcaaacctggaaaatctggtgag cgtggacctgcagggcctcagggggctcgtggattccctggaactcctggacttcctgga atcaaaggacacagaggtcacaacggtctggatggagctaagggagagaccggtgccgca ggagccaagggtgagtctggttcctctggagagaacggcgcccccggatccatgggccct cgtggtcttcccggtgagaggggacgttctggagcggccggcgctgcaggtgctcgtgga aatgatggcttgcccggtcctgctggtccacctgggcccgttggtcctgctggagctccc ggtttcccagggtcgcctggatccaagggagaagctggtcctactggaggccgtggaact gaaggagcacagggacctcgcggagaggccggcaccccaggatcccctggaccctccgga gcatcgggaaaccccggtactgatggaatccccggctctaaaggatctgctggcggcgct ggtattgctggtgctcctgggttccccgggcctcgtggcccacccggaccacagggagcc acaggacctctggggccaaagggacagtctggagaccccggcctcaccgggttcaaagga gaagccggacccaagggagagcttggccccatcggtcctctcggggcccccggtccttct ggtgaagaaggaaagcgaggcgcaagaggagagcccggaactgctggacccctcggacct ccaggagagagaggcgctcctggtaaccgtggtttcccaggtcaggacggtctcgccggt gctaagggcgcccccggtgaccgaggtgttcctggtgccggtggacccaaaggtgtcgga ggagatccgggacgcacaggagagtccggcctccccggagccagaggtctcaccggacgt cccggagatgttggacctcaaggcaaagttggagcctcaggtgcttctggtgaggacggt cgccccggcccacccggccctctgggagcccgaggacagcccggagtgatgggattccct ggaccaaagggagccaatggtgaagctggaaaggcaggagagaagggtcttgtgggtcgt cctggtttgagaggtctggctggaaaagatggtgagaccggtccaactggatcttctggc cccgctggacccgctggagagagaggagagcaaggacaggccggaccttctggcttccag ggtctgcctggaccatctggagccccaggagagagtggaaagcctggagatcaaggtatt tctggagagggcggagttcctggtgctgttggacccagaggagagcgtggtttccctgga gagcgaggcggcgctggagctcagggtcttcagggacctcgtggagtcccaggaacacct ggatctgacgggcccaagggagccattggaccttctggctctgctggatcccaggggccc cccggcctgcagggtatgcccggagagagaggaaacggtggcatcacaggagccaaggga gaccgaggtgacaatggacagaaaggacccgagggagcttctggaaaggacggcggaaga ggtttgaccggtcccatcggtcctcctggcccatctggacccaacggcgccaagggtgaa actggaatcactggccccaccggtgctactggtgttcgtggtgctcctggcgaccgtgga gaggtcgggcctcacgggccggccggcttcgctggacctcctggttcagacggtcagccc ggtgctaagggagagctcggtgagtctggacagaagggagaaggcggttctcctggacct cagggaccctctggcgctcctggacctgtgggacccactggtgtgtctggacttaaagga gcacgcggtgctcagggtgctgctggagctactggtttccctggtgctgctggcagagtt ggatctcctggccccaatggtaaccccggctctgctggccccgccggcgctcctggtaaa gacggaccgaagggcgctcgcggtgacgccggcctcacgggaagacaaggagacgccggt ctccgtggccctatcggcttgcagggagagaagggagaggctggaacaatcgggcagcct ggtgtggacgggcctacaggtcctagtggtctggttggatctcgcggtattgttggtttg cccggtcagcgtggagagagaggtttcgctggtctccctggaccttctggggagcctggt aaacaaggaggttctggctcttctggcgaccgcggaccccctggacccgtgggaccccct ggtctcactgggccttctggagagactggccgagagggtacccctggatccgatggaccc ccaggtagagacggatctcttggagtcaagggagagcgaggtaacaccggccccattggt gcccccggatctcccggcgcccccggatccaccggacccgtcggacccctcggcaagcag ggagacagaggagagggcggcgctcaaggacctgcaggaccttctggaccaagcggcgct agaggcatggctggaccccaaggaccacgtggagacaagggagagagcggcgaggctggc gagaggggacagaagggccaccgtggtttcactggtctgcagggtcttcctggacctcct ggctccgctggggactctggagccgctggacctgccggatcaagcggagctaagggccca gctggaccatctggacctgctggcaaagacggatcaaacggacagcttggccccatcgga ccccccggtccccgtggacgttctggagaaagtggtcctgccggtcctcccggtaacgcc ggaccccccggcccacccggtcctcccggtccgggcatcgacatgtcggcctttgccggt atgggtcagatcgagaagtcccccgatcctctccggtacatgagggccgacgaggcttcc agctccctgaggcagcacgacgtggaggtcgattccacgctgaagaccctcaacagccag atcgagaacctgcgcagccccgacggcagccagaagaaccccgctcgcacctgcagagac ctgaaactgtgccaccccgagtggaagagcggtaactattgggttgatcccaacattggc agcattgctgatgccatcaaggtcttctgcaacatggagagcggagagacctgcgtctct gcgagcattcccgaggtaccgaagaagaactggtggaccagcaagggcaacgaccgcaaa cacgtctggttcggagagaccatgaacggaggattccacttcaactacgctgaagacggc tccgtcgccaacgccgccagtgtccagctgaccttcttgaggcttctgtccaccgaggcg tcccagaaactcacttaccactgcaagaacagcatcgcctacatggaccaggccgcgggc aacctgaagaagggcctgaagctgcagggcgccaacgacgtggagctccgcgcggagggc accagtcgcttcacgtacaccgtgttggaggacggctgcaagaaacacaccgaccggtgg ggcaagactgtctttgagtacaaaacacagaagacctcccgtctgccaatcgtggacatt gctcccatggacatcggaggagcggatcaggagttcggagtcgaagtaggcgcagtctgc ttcttgtaa

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