Clinocottus analis (woolly sculpin): 137800289
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Entry
137800289 CDS
T10471
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137800289 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137800289 (lamb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
DUF2959
Laminin_II
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
137800289
NCBI-ProteinID:
XP_068453525
LinkDB
All DBs
Position
Unknown
AA seq
1797 aa
AA seq
DB search
MQASLLTLLCVLAAAAGQEPNHSHGCAQGSCYPATGDLLVGREKNLKASSTCGMRKKEPY
CIVSHLQDEKKCFDCDSRRPYDPVYNTINHRIENVITTFKPHRKKSWWQSENGKSDVFIQ
LDLEAEFHFTHLIMTFKTFRPAAMLIERSADFGRTWQVYRYFSHDCAATFPRVSQGPLRN
INDVTCESRYSDIEPSTEGEVIYRVLEPAIDIEDPYSLSIQNQLKITNLRVNFTKLHTLG
DNLLDPRAEIKEKYYYAMYELVVRGNCFCYGHASECAPIDGIRDDIEGMVHGRCVCNHNT
KGLNCEQCNDFHNDLPWRPAEGLSTNACKKCTCNSHSTQCHFDMAVFLATGNLSGGVCDD
CQHNTMGRNCEMCKPFFYKDPIKDIRDPRVCIACDCDPDGSQNGGMCDSHTDPSLGMMGG
QCRCKANVEGPRCDKCKTGFFGLSPHNLQGCQPCRCDHRGTVSGSSQCDPVSGDCFCKRL
VTGRSCDQCLPEHWALSHDLNGCRGCECDIGGALDNHCSMESGQCRCRSHMTGRQCTQVE
SRYFFMALDHFLYEAELAKMGQGCTLETREHQPGRPATWTGIGFARAPEGGTLEFLISNV
PYSMEYDLLIRYESQMPRDWEDVRITVIRPGPIPTSSPCGNTIPDDDRLTVSLPAGARFV
VPPHVVCLERGVTYTLRFEFKRYQDANSILNGAANAVLLVDSIALMPRHSSMEMFNAGDL
ASNNRKQTYERYRCHEGPKSVTRPLMSDTCAKLMASMSAIVNDGALPCSCDPQGSLSSMC
DVRGGQCHCRPNVIGRRCDQCAPGTYGFGPSGCLACGCSLEGSVTRLCDKFTGQCRCRPG
AFGQHCDGCQAGHWGFPSCRPCQCNGHADKCDQRTGACVGCRDNSGGDKCDRCANGYYGN
PVLGKASSAQCRPCPCPDGPNSGRHFAASCYQDNRNRQIICNCNQGYTGIVKRSGVTIFK
RARCEECAPGYYGNPSQPGGRCQPCQCNNNIDMSNMDACDRQTGQCRKCLYNTEGPTCGI
CKSSYFGDASRRNCRKCTCNFLGTDRSQCMEREDCVCQRATGQCQCLPNVIGLPCDHCAP
NHWNLASGRGCESCGCDPNNSVTSSCNEFSGQCQCRDGFGGKTCTDCQENYWGDPRTQCR
ACDCDWRGIETSQCNRVTGHCVCQQGVSGVRCDQCARGFSGKFPNCQPCHKCFGDWDRIV
QDLAVRTKTLAERAHEIQTTGLTGPYEKAFKDMEEKLAQARGIVDARNATAAAVATLMEL
IEDLRAQIGETTDTLNRLEGDLTIVQDSNSEASKELSALEREAKELNLTSEQLHRQLDIL
KNSNFLGAYDSIRNSYNKSRDAERRANESTTTRPSTVSQSADTRRRTERLISAKKDDFNR
KNAANKRALGDLNSRAQGLDLKKINEKVCGAPGDAPCGESPCGGAGCRDDEGNRHCGGLN
CNGAVAVADNALERAKHTEKELSKAMREVEGLFSKVADAKTKAEEAKGKAQTALDKATAT
KNKVERSNNDLRDLIKQIRDFLTQEGADPDSIEAVANRVLELSIPASPLQIRHLADEIKE
RVRSLSNVDAILQQTQGDVRKAERLLLDAKRARHSAEGVKTTAETVKQALLDAQTAQTSA
EKAIARAKADIGETEARLVQIESETSNSEKNLNEAMDRLGTLGREISALKTKRANNSMAA
ARAEETATMARDKANEAKQILDGQLTDKYHEVQQRVDTKAKAVQEAKKRAESLRDEAKEL
LRDAQNKLQRLAELETNYEENQKRLEGKARQLDGLEDKMKAILSDINKQIQIYNTCQ
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgtcactgttaacgctgctctgcgtcctggctgctgctgctggccaggagccc
aaccacagccacggctgtgcccagggcagctgttatccagcaacgggggacttgctggtg
ggacgagagaagaacttgaaggcctcgtccacatgcgggatgaggaagaaagagccctac
tgcattgtcagtcacctgcaggatgagaagaagtgtttcgactgtgactccaggcggcca
tacgacccggtgtacaacaccatcaatcaccggatagagaacgttatcaccaccttcaaa
ccccaccgcaagaagtcctggtggcagtctgagaatggaaagtcggatgtctttatccag
ctggatctggaagcagagtttcatttcactcaccttattatgaccttcaagaccttccgt
ccagcggccatgctgatcgagcgctccgcagattttggtcgcacctggcaggtctaccgc
tacttttcccacgactgcgctgctacctttcccagagtctcccagggtcctttgcgtaac
atcaatgatgtcacctgtgagtcgcgctactccgacattgagccgtcaacggagggagag
gtcatctacagagtgttggagccagccattgatattgaggacccatacagcctgagcatc
cagaaccagctgaagatcactaacttgagagtaaacttcaccaaacttcacacactggga
gacaatttgctggacccccgagctgaaatcaaagaaaagtattactacgccatgtacgag
ctcgtcgtacgaggaaactgcttctgctatggccacgcctcggagtgcgcccccatcgac
ggcatcagggacgacatcgaaggaatggttcacggcaggtgtgtgtgcaaccacaatacc
aaaggtttgaactgtgagcagtgtaacgacttccacaacgacctgccgtggagaccagcc
gaggggctcagcaccaacgcctgcaagaagtgtacctgtaacagccactcgacccagtgc
cactttgacatggcggtgtttttggccacgggcaacctcagcgggggagtgtgtgacgac
tgtcagcacaacaccatgggacgcaactgtgagatgtgcaaaccgttcttctacaaagac
ccaatcaaggacatcagggacccgcgagtctgcatagcgtgcgactgcgacccagatggc
tctcagaacggagggatgtgcgacagccacacggacccgtccctcggcatgatgggaggt
cagtgccgctgcaaagccaatgtcgaggggccgcgctgcgacaagtgtaagacaggcttc
tttggcctgagcccccacaaccttcagggctgccaaccctgccggtgcgaccacagggga
accgtgtcgggcagctcccagtgtgacccggtcagcggagactgcttctgcaagcggctc
gtcactggacgcagctgtgaccagtgtttgccggaacactgggctctgagccacgacctc
aacggctgccgaggctgcgagtgcgatatcgggggagccctggacaaccactgctccatg
gagagcggtcagtgtcgctgccgcagtcacatgacgggacgccagtgtactcaggtggag
tccagatatttcttcatggctctggatcacttcctgtatgaggccgagttggccaaaatg
ggacagggctgtacattggagaccagggagcaccagccgggtcgccctgccacatggacg
ggcattggatttgcccgggcacccgagggtggtaccctagagttcctcatcagtaatgtc
ccctactccatggaatatgacctgcttatccgctacgagtcacagatgcctcgagactgg
gaggatgtgcgaataacagtgatccgtccggggccgattccgaccagcagcccctgtgga
aacaccatcccagatgatgacagactcaccgtctccctgccggctggagccaggtttgtg
gtccctcctcacgttgtgtgtctggagagaggtgtgacttacaccctccgctttgagttc
aaacgctaccaggatgccaacagtatcctcaacggagcagccaacgctgtcctcctagtg
gactctattgccttgatgccgcgccactcctccatggagatgttcaacgcgggcgatctg
gcttccaacaacaggaagcagacttatgagcggtaccgctgccacgaggggccgaagagc
gtaacgcgaccgctgatgagtgacacctgtgccaagcttatggccagcatgtcggccatt
gtaaatgacggggctctaccttgtagttgtgatcctcaggggtccctcagctccatgtgc
gacgtgcgcgggggccaatgtcactgcaggcccaatgtgattggtcgacgctgtgaccag
tgtgctccgggaacatacggctttggaccctcaggctgcttagcctgcggttgcagcttg
gaaggctctgtgacgcggctttgtgacaagttcaccggtcagtgccgttgccgtcccgga
gcgttcggtcagcactgcgacggctgccaggcgggccactggggcttccccagctgccga
ccctgccagtgtaacggacacgccgacaagtgcgaccagaggaccggcgcctgcgtcggc
tgcagggacaactctggaggagacaagtgtgacaggtgtgctaatggttactatggtaac
ccagttttgggcaaagcgtccagtgctcagtgtcgcccgtgcccctgtccagacggcccc
aacagcggacgccactttgctgcgtcttgttaccaggacaaccgtaacagacaaatcatc
tgcaactgtaaccagggctacacagggattgttaaacgctccggggtgaccatttttaag
cgagctcgatgtgaggaatgtgctccgggttattatggcaacccctctcaaccaggagga
cgttgccagccatgccagtgtaacaacaacatagacatgtccaacatggacgcctgcgac
cggcagaccggacagtgccggaaatgcctttacaacaccgagggccccacctgtggcatc
tgcaagagcagctactttggcgatgcttcccgtcgcaactgcaggaagtgcacgtgtaac
ttcctgggtactgaccgtagccagtgcatggagcgtgaggactgtgtgtgccagcgagcg
acagggcagtgtcagtgtctgccaaacgtcatcgggctgccatgtgaccactgcgctccc
aaccactggaacctagccagcgggaggggctgtgaatcctgcggctgtgatcccaacaac
tcagtcacctcctcatgcaacgagttctctgggcagtgtcagtgtcgcgacggcttcggc
ggtaagacctgcacggactgtcaggagaactattggggagaccccaggacacagtgcaga
gcttgcgactgtgactggcgaggcatcgagacctctcagtgcaaccgggtaaccggccac
tgtgtttgccagcagggggtgtccggtgtccgctgtgaccagtgtgccagaggcttctct
ggcaagttccccaactgtcagccctgtcacaagtgcttcggggactgggatcgcatcgtg
caggacctggcagtgcgcaccaagactctggcagagcgggcccacgagattcagaccact
gggcttactgggccctacgagaaggcctttaaggatatggaggagaaactggcacaagct
cggggaattgtcgacgcacgcaacgccactgctgcagctgttgctaccctgatggagctt
attgaagatcttagagcgcagatcggtgagaccacggacaccctgaaccgtttggaagga
gacctcaccatcgtccaggacagcaactctgaggcaagcaaggagctgagtgctctggag
agagaagctaaagagctaaacctcacttcagagcagctacaccgccaactcgatatccta
aaaaactccaacttcctaggtgcgtacgacagcatccgtaactcttacaacaagtcgcgt
gatgcggagcggcgtgccaatgaatcgacaaccacccggcccagcacggtcagccaatct
gcagacactcggcgccgcaccgagcgcctcatcagcgccaagaaggatgacttcaaccgc
aaaaacgccgcaaacaagcgcgcgctcggagacctcaacagccgagcgcagggcctggac
ttaaagaaaatcaatgagaaggtttgcggcgccccaggtgatgccccctgtggggaaagc
ccttgtgggggtgcgggttgccgcgacgatgaaggaaaccgtcactgtggaggcctaaac
tgtaacggcgctgtagcggtagctgacaacgccctggagagagccaaacacacagagaag
gagctgagcaaagctatgagagaggtcgagggactctttagcaaggtggcagacgccaag
accaaggcagaggaggccaagggaaaagcccaaacagctctggacaaagccaccgccacc
aagaacaaagtggagcgctccaacaacgacctgagagacctcatcaaacagatcagagac
ttcctcacccaggaaggcgcggacccggacagcattgaggccgtggcgaaccgcgtgctg
gagctctccatccctgcttcgccccttcagatccggcatctggctgatgaaatcaaggag
cgcgttcgcagcctttccaatgtggacgccatcctgcagcagacgcagggcgatgtgcgc
aaggcggagcgactgctgctggatgccaagagggcaaggcacagtgctgagggggtgaag
accacagcagagacggtgaaacaggccctgctggacgctcagactgcccagacatcagca
gagaaggccatagcgagagccaaggcggacattggggagactgaagcccgactggtacag
attgagtcggagacatccaacagtgagaagaacctcaatgaggccatggaccgcctgggc
acgctgggacgggagatcagcgccctgaagaccaaacgggccaacaacagcatggcagcg
gcccgagccgaagagacggccaccatggcacgagacaaggccaacgaagccaagcagatt
ctagatggccagctgacggataaataccatgaggtgcagcagcgggtcgacacaaaggcc
aaagctgtgcaggaagccaagaaaagagcagagagcctcagagatgaagcaaaggaacta
ctgagagatgcccagaacaagctccagaggctagcagagctggagacaaactatgaggag
aaccagaagaggctggaggggaaggctcgtcagctggacggcttggaggacaagatgaaa
gccatcctcagtgacatcaacaaacagatccagatctacaacacatgtcagtaa
DBGET
integrated database retrieval system
