KEGG   Clinocottus analis (woolly sculpin): 137800302
Entry
137800302         CDS       T10471                                 
Symbol
tnnc1a
Name
(RefSeq) troponin C type 1a (slow)
  KO
K05865  troponin C, slow skeletal and cardiac muscles
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana04020  Calcium signaling pathway
cana04260  Cardiac muscle contraction
cana04261  Adrenergic signaling in cardiomyocytes
cana04814  Motor proteins
cana04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cana00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    137800302 (tnnc1a)
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    137800302 (tnnc1a)
   04820 Cytoskeleton in muscle cells
    137800302 (tnnc1a)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    137800302 (tnnc1a)
   04261 Adrenergic signaling in cardiomyocytes
    137800302 (tnnc1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cana04812]
    137800302 (tnnc1a)
Cytoskeleton proteins [BR:cana04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     137800302 (tnnc1a)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_8 EF-hand_6 EF-hand_5 EF-hand_9 AIF-1 EH SPARC_Ca_bdg DUF1707 DUF5580_M FCaBP_EF-hand RNA_pol_Rpb4 Dak2 DUF5390 EF_EFCAB10_C
Other DBs
NCBI-GeneID: 137800302
NCBI-ProteinID: XP_068453548
LinkDB
Position
Unknown
AA seq 161 aa
MNDIYKAAVEQLTDEQKNEFKAAFDIFVQDAEDGCISTKELGKVMRMLGQNPTPEELQEM
IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELAELFRMFDKNADGYIDLDELKMM
LESTGEAITEDDIEELMKDGDKNNDGKIDYDEFLEFMKGVE
NT seq 486 nt   +upstreamnt  +downstreamnt
atgaacgacatctacaaggcagcggtcgagcagctgacagacgaacagaaaaatgagttc
aaggccgccttcgacatcttcgttcaggacgcggaggacggctgcatcagcaccaaggag
ctggggaaggtgatgaggatgctgggccagaaccccacgcccgaggagctgcaggagatg
attgatgaggtggacgaagacgggagcggcacggtggactttgacgagttcctggtcatg
atggtgaggtgcatgaaggacgacagcaaagggaagtcagaggaggaactggcggagctg
tttcgcatgtttgacaagaacgcagatggttacatcgacctggacgagctgaagatgatg
ctggaatctacaggagaggcaatcaccgaggacgacatcgaggagctgatgaaggacggg
gacaagaacaacgacggcaaaattgactacgatgagttcttggagttcatgaaaggagtg
gagtaa

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