Clinocottus analis (woolly sculpin): 137800358
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Entry
137800358 CDS
T10471
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana00310
Lysine degradation
cana01100
Metabolic pathways
Brite
Enzymes [BR:
cana01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
137800358 (prdm2a)
Transcription factors [BR:
cana03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
137800358 (prdm2a)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
137800358 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137800358
NCBI-ProteinID:
XP_068453623
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Position
Unknown
AA seq
1402 aa
AA seq
DB search
MEDSPHLYISDIDDNKDMEEGGEEEDDDDDVHQEETSMQPDMITSLYSDLHEPPNQTTEK
EWNSFPCQCCERHFTSKQGLERHMHIHALEKNKAPACKSHQRKMSFDSNLGQSQHEKMKP
LDSVGSVMQLHTSSPASSNTYIYSTGDRSAQPDKPEVFEGHHACKYCEKIFTTHTNKRRH
ERRIHEQNLQVRNVEKIQLAQEENLQRMHSEPSKQETEIADNTAPAAVLENDLECAEQYM
LDVSSNISENLSFYIDGKLVSTSTVSSCEASEIHSGSSTLVGLDALILEPAQICQVLNID
SVAGKEIPGQPQVKRRTATPPLLPQIKTELESEVVVSSSSSLLVSSLIENLLPPNTESTG
VQKERTVFLSPKLKQLLEKQDGLKPTLALIADAQKPCSAVSLSVLAAGTGRFKRRTGSPP
SSPQENPTSKDETADSGDCDTVSTEQIETQHSSPVQQTANVKDDTTSHVEEPAVKPVSTE
SWPPTAGGNSCNQQPLDLSNTIKRNDDLDFTDAVLDLSFQKKTLGKSEQTLDLVSQAVLK
AGKSNTCMAETALINIGEQNVSLGNPEIPLVTEFTILTGPEVMAPMEPMAEGLVYGLALP
SHSLTPSPASLTPVCLQPASPCTIAFASTASHALLPTASSLMTVLAPSNISNPQSQPNQL
LAPNISPEPLVICPDDALHFSQCDLTTAFTPTDSAIPVTLSQSLDPTQNLPGHVFLSDQI
ALNHPIVESIPMSEVPFTPTVTLNDSLINSYNITSSTVLIECTIALEAPGSILPAAVTLP
ENTAEPPAPTQMVVNHIEQQDIVIVPNSQTVDPSILISSIAESVSLSTTTSAISDCPTVG
ESSPDPEPVVNAEPPSIKEEEAADGTISMPKISSKTSPLSEKAEEDEVSSGTLSDAQQQT
FTKNFICNVCDRLFHSMKELGHHVSDHADEWPYKCEFCVLLFSKPAALLDHRSSLHGVGK
SYVCSACTKEFVYLSNLKQHQDELHPGQQCTYTEEEKGKLRPQNYNNSIKVNTEPPVLDA
AKEPKKLVKKEEREVDVAAEELFTTIKIMASDVSKIKGPDVRLGINQHYPSFKPPPFPYH
NRSPAGSVASATNFTTHNIPQTFTTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTP
KRNPIPLRHFAKTQNGVLSTTNTTNGLNASNRSSQSNRSKPSQESPVKVKFKVLNKRKKK
LVQRVMPQRNKSAPSSNKMSPACVDAQQEIFVCPHCSREFTMRRSRTKHMAVCPKKPKEV
KKRKEGGISVTKENDGRLHRRVEEKQQTSPQHKTRLQSSGPAKRHAILPVQTVFSNKRSK
IIIKESTQPKQEPPTLSELPIVRTFNPSMRQYSRVQHGVKGIPIKITIVKPQQAAPQKEE
QPPAQSREQGAAASSSEQRPSA
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcccctcacttgtacatctctgatattgatgacaataaagatatggaggaa
ggtggggaggaggaggatgacgacgatgacgttcatcaagaggaaactagcatgcagcca
gacatgattacgtcactgtactctgatcttcatgaacctcccaaccagactactgagaaa
gaatggaactcttttccctgccagtgctgtgagagacattttaccagcaaacaaggctta
gaacgacacatgcacattcatgctttggagaaaaacaaggcacccgcatgcaaaagccat
caaagaaaaatgtcttttgattcaaacctgggtcagtcgcagcatgagaagatgaagcct
ctggattcagttggatcagtcatgcagcttcatacttcatcccccgctagctctaatact
tacatttattcgaccggtgaccgcagtgctcagccagacaaaccggaagtatttgagggg
catcacgcttgcaagtactgtgaaaagatattcactacacacaccaacaagcgaagacat
gagcgcaggatccatgagcagaacctgcaagtcagaaatgtggaaaaaatccagctggcc
caagaggaaaatcttcagaggatgcacagtgaaccttctaaacaggaaacggagatcgct
gacaacacagctcctgcagctgttttggagaatgacctggaatgcgcagaacaatacatg
ctggatgtctcgagcaatatttcagagaatctcagcttttatattgatggaaagctagtg
tcaacaagtacggtcagtagctgtgaagcatccgagattcattctggttcttccacttta
gttggactggatgccctgattttagagcctgcccaaatatgccaggttttaaatatagat
tcagttgcaggcaaagagatacctggtcaaccgcaggtcaagagaagaactgcaacacca
cctcttttaccacaaattaagactgaactggagtctgaggtggttgtgtcttcctcgtca
tctttacttgtctcttctttaatagagaatctacttcctccgaataccgagtccacaggt
gtgcagaaggaaagaactgtgtttctgtctccaaagctgaagcagctcctggagaagcag
gatggccttaaacctacacttgctctcatcgcagatgcccagaagccttgttcagccgtc
tctctttctgtcctggctgctggaacaggtaggtttaaaagaaggactgggtctccacca
agctctccacaggaaaacccaacttctaaagacgaaacagcagacagtggagattgtgat
actgtaagtacagagcagatagagacccaacatagctcacctgtgcaacaaacagccaac
gtaaaggatgacaccacttcacatgtggaggagccagcagtgaaacctgtctcgacagaa
agctggccccccaccgccggcggtaattcttgtaaccagcaaccactggatctctctaat
acaatcaaaagaaatgatgatttagattttactgatgcagtgctggatttaagctttcaa
aagaagaccctaggtaaatctgagcagacattggatttggtttcacaggcagttttgaaa
gcagggaaatcaaatacatgcatggcggagacggccttaataaatattggagagcaaaat
gtaagcctcgggaatcctgagatccctttagtcacagagtttacaatacttacgggtcca
gaggtgatggccccgatggagcccatggctgagggacttgtttatgggcttgcacttccc
tcccattctctgactccatcacctgcatcccttacccctgtatgcttgcagccagcttca
ccgtgcactatagcatttgcttccaccgcctcacacgcactgctccctactgcttcttca
ttaatgacagttttagcaccatcaaatatttctaaccctcaaagccaaccaaaccagtta
ctagccccaaatatatctcctgagcccctggtaatctgcccagacgacgcattacatttt
tcccagtgcgatttaactaccgcatttactcctacggattctgcaatccctgtcactctc
tcccaatcccttgacccaactcaaaatctacctggccacgtctttctctctgatcaaata
gctctcaatcacccgatagttgagtccattccgatgtcagaagtgccatttacacccact
gtaactttaaacgattcccttatcaactcttacaacattaccagcagcacagtattaata
gagtgcacaatagctcttgaagccccagggagtatactccctgctgcagttaccttaccg
gaaaacactgctgagcctccagcacctacacagatggttgttaatcacatagaacagcaa
gatattgtaatagtgcccaactctcaaactgtggacccctctattcttatttcctctatt
gcagaatcagtcagtctatccaccaccacctcagcgatatctgattgtcctactgtgggg
gaatcaagtcctgacccagagcctgttgttaatgcagagccaccaagcataaaagaggaa
gaagctgctgacggcactatttccatgcccaaaatctcatctaaaacctctccactgtct
gagaaagctgaagaggacgaagtctcaagtggcacattaagcgatgcacaacagcagact
ttcaccaagaatttcatctgcaatgtgtgtgacaggctgttccattcaatgaaagagctg
ggccatcatgtcagtgaccatgctgatgaatggccctacaaatgtgagttctgcgtgctt
ctctttagcaaacccgccgcgttgcttgatcatcgatcaagcctccacggtgttggcaag
agttatgtttgcagtgcgtgtacaaaagaatttgtctatctttctaatctgaaacagcat
caggacgaattacatcctggccagcagtgtacctacacagaagaagaaaagggtaaacta
agacctcagaactacaataactcaataaaagtcaacacggagccaccggtgctcgatgct
gcaaaggaacccaagaaactggtgaaaaaggaagaaagggaagtggatgtggctgctgaa
gaactgtttacaacaataaaaatcatggcctccgatgtatccaaaatcaaggggcctgat
gttcgtcttggcattaaccaacactatcccagctttaagcccccaccctttccttaccat
aacagatcacccgctggctcagtggcttcagccacaaacttcaccacccacaatatccca
caaacctttacgacagctatccgatgcaccaagtgtggaaagagctttgataacatgcca
gagttacacaagcatatcctggcttgtgcaaatgcaagtgataaaaggagatacacgccc
aaaagaaatcccatcccactacgccactttgcaaaaactcaaaatggagttctgtcaacc
actaatactactaacggactaaatgcttcaaacagatcgagtcagtcaaaccggtccaaa
ccgagccaagaatcgccagtaaaagtaaagttcaaggtgctgaacaaaaggaagaaaaag
ttggtccaaagggtcatgccacagaggaacaaatcagccccttcatcgaataaaatgtca
cctgcatgtgtggatgcgcagcaagagatctttgtctgcccgcactgcagcagggagttc
acgatgcgccgcagcagaaccaaacacatggccgtctgccccaagaaaccgaaagaggtg
aagaaaaggaaagaaggaggaatctctgtgacaaaggaaaatgatgggcgcctccataga
cgggtggaagagaaacaacaaacctcacctcagcataaaacaagactgcagagttctggg
cccgctaaaaggcacgccatcctaccagtgcaaaccgtgttctcaaacaaaagaagtaaa
ataattataaaagagagcacgcagccgaaacaagagccgcccacactgagtgaactcccc
attgttcgcactttcaacccctctatgcgccagtatagcagagtgcagcatggcgtcaaa
ggcatccccatcaaaatcaccatcgtgaaaccccaacaggccgcaccgcagaaggaggag
cagcctcccgcccagagccgagagcagggagctgccgccagcagctctgagcagcgtcct
agcgcctga
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