Clinocottus analis (woolly sculpin): 137801204
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Entry
137801204 CDS
T10471
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04810
Regulation of actin cytoskeleton
Brite
Domain-containing proteins not elsewhere classified [BR:
cana04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
137801204 (fgd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_16
PH_13
RHG20_PH
FYVE_2
zf-RING_5
C1_1
PH_2
Motif
Other DBs
NCBI-GeneID:
137801204
NCBI-ProteinID:
XP_068454746
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MTGFVFCCAMYMDRSSLSRGPSSSSSPSLLTKSLSLEPPCSPCGHQGALDADAPQQQSFF
PGSSSSSSGPASLEGGAGPTEPPATTITPPSKSRPPLPGPKPQVPPKPPHLQQQAGVSRP
RLRAPDKPLPPTPPCRPLPADPRGGRTPPTRADGTASPTCVLSLIEKFEREQIIVVPDIS
GGALCPRPLDPPSSRPSSPAPPPPKEEPPPEVKGHDDITLGEDGEERDLHDDDDDEDEDD
EEEEEDDDDDEEDEELAACRDLHQKRLSMESGYSDVAAVEMREPPLDQSELPSERLSLPS
SQTEGKLANRDSGIDSISSPSHSEELCFAGVDDGGVAYPCSPALLPRLSSSSSYAGEAGG
GARRRRDFSEEGDSDLEEEEAELTLVLPPPKTDRQDSVELSVQQRVFNIANELLHTEIAY
VSKLHLLDQVFCARLLEEARSRSSFPGDVVQGIFSNICSIYCFHQQFLLPALQKRMEEWD
SNPRIGDILQKLAPFLKMYGEYVKNFDGAMELLSVWTERSTPFKGIVQEIQREERCKNLT
LQHHMLEPVQRIPRYELLLKDYLHRLPEDAPDHRDAQKSLELIATAAEHSNAAIKKMDRM
RKLLQVYELLGGEEDIVNPTNELIKEGHILKLSNKNGTTQDRHLLLFNDRLLYCVPKLRL
IGQKYGVRARIDVDGMELKETSGVAASRTFLVSGKQRSLELQARTEEEKKDWIQAIQATI
QRHEQTMESFRHLTCSLRDDESTPPHSPSCVELGKRAPTPIREKEVTLCMKCQEPFNSIT
KRRHHCKACGHVVCGKCSEFRARLSYDNNRTNRVCIDCYAMLVGMSTSPAALSSSTQRRR
SILEKQASLAAEHSVICSFLHHMEKGGRGWQKAWFVIPENEPLVLYVYGAPQDVKAQRSV
PLIGFEVSLPESCDRLERRHAFKISQSHLTLYFSAEGEELQRRWIDVLLRAGRGEEPQVH
RPIAESLEEEGEELVAAAEEENT
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgaccggatttgtgttttgctgcgcgatgtacatggacagaagcagcctgagccgaggt
ccctcctcctcctccagccccagtttgctgactaagagtctgtccctggagccgccctgc
tccccgtgcggccaccagggggcgctggacgccgacgccccccagcagcaaagcttcttc
ccggggtccagctcctcgtcgtcaggccccgcctctctggaggggggggcggggccaaca
gagccgccagctaccacaataacaccaccgagcaagagccggccgccgctgcccggacct
aagcctcaggtccccccgaaaccccctcaccttcagcaacaggcgggggtgtcgaggcca
cgcctccgggctccggacaagcccctccccccgaccccgccatgcagacccctcccggcg
gacccacgagggggccggactccgcccacacgcgcagatggcaccgcctctccaacctgc
gtcctgtcactcatcgagaagtttgagcgggagcagatcatcgtggtccctgacatctca
gggggggctctgtgtccccgccccctcgaccccccctcctctcgaccttcatctccggcc
ccgcccccaccgaaggaggagccgccccctgaggtcaaaggtcatgatgacatcacactc
ggggaggatggggaggagagggacctacacgatgacgatgatgatgaagatgaagatgat
gaagaagaagaagaggatgatgatgatgatgaagaggatgaagagctggcagcatgccgg
gacctccatcagaagcgtctctctatggagtcgggttacagcgacgtggccgcagtggag
atgagggagccgccccttgaccaatcagagctcccctcggagcgcctgtccctcccctcc
tcgcagacggagggcaagctggccaatcgggacagcggcatcgacagcatcagctcgccg
tcgcacagcgaggagctctgcttcgccggtgtggacgacggaggtgtggcctacccctgc
agccccgccctcctgccccgcctctccagctcgtcctcgtatgcgggagaggcaggtggc
ggggccaggaggaggcgggacttctctgaggagggagacagcgacctggaggaggaggag
gcggagctaactctggtgctgccccccccgaaaacagacagacaggactctgtggagctg
tctgtccagcagagagttttcaacatcgctaatgagctgctccacactgagatcgcctac
gtctccaagctccacctcctcgatcaggtgttctgtgcccgcctcctggaggaggctcgg
tcccgctcctccttccccggtgacgtggttcagggcatcttctccaacatctgctccatc
tactgcttccaccagcagttcctcctgccggcgctgcagaagcgcatggaggagtgggac
tctaacccccggatcggtgacatcctgcagaagctggctccgttcctgaagatgtacgga
gaatacgtgaagaactttgacggagcgatggagctgctgagcgtgtggacggagcggtcc
actccttttaagggcatcgtgcaggagatccagcgggaggagcgctgcaagaacctcact
ctgcagcatcacatgctagaacccgttcagaggattcctcgctacgagctgctgctcaaa
gactatctgcaccggctccccgaggacgccccggaccaccgggacgcccagaagtctctg
gagctcatcgccacagcagcagagcactccaacgctgccatcaagaagatggaccgcatg
aggaagctgctgcaggtgtacgagctgctgggcggagaagaagacatcgtgaacccgacc
aacgagctcatcaaggagggacacatcctgaagctgtccaacaagaacgggaccacgcag
gaccggcacctcctgctgttcaacgacaggttgctgtactgtgtccctaagctgcgtctg
attggtcagaagtacggcgtccgcgctcgcatcgatgtggacgggatggagctgaaggag
accagcggcgttgcagcatccaggacattcctggtgtctggaaaacagagatccctggag
ctgcaggccaggactgaggaggagaagaaagactggattcaggccatccaggcgacaatc
cagaggcacgagcagaccatggagagcttcaggcacctcacttgctccctgagggacgac
gagtccacgccgccacactccccgagctgtgtggaactgggaaaacgagctccgactccc
atcagagagaaggaggtgactctgtgtatgaaatgtcaggagccgttcaactccatcacc
aagagacgccaccactgcaaagcctgtggccacgtggtttgtgggaaatgttccgagttc
cgcgctcgtctttcgtacgacaacaaccgcaccaaccgagtctgcatcgactgctacgcc
atgttggtggggatgtcgacttcacccgctgcactgagcagcagcacccagaggagacgc
tccatcctggagaaacaggcctccctggccgctgagcacagtgtgatctgcagcttcctg
caccacatggagaaaggaggccgcggctggcagaaggcctggttcgttatccctgagaac
gagccgctggtgctctacgtctacggagcgccacaggacgtgaaggcccagcgcagcgtt
cctctgattggcttcgaggtctctcttcctgagtcatgtgaccggctggagcgacgccac
gccttcaagatctcccagagtcacctgaccctgtacttcagcgccgagggggaggagctt
cagcggcggtggatcgacgtcctgctgagggctgggaggggggaggagcctcaggtgcac
cggccaattgcagagagtctggaagaggagggggaggagctggtggctgcagcggaggag
gagaacacgtga
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