Clinocottus analis (woolly sculpin): 137801425
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Entry
137801425 CDS
T10471
Name
(RefSeq) glutamate receptor ionotropic, kainate 5-like
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04080
Neuroactive ligand-receptor interaction
cana04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
137801425
04082 Neuroactive ligand signaling
137801425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cana04040
]
137801425
Ion channels [BR:
cana04040
]
Ligand-gated channels
Glutamate (ionotropic)
137801425
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF7855_C
Motif
Other DBs
NCBI-GeneID:
137801425
NCBI-ProteinID:
XP_068454935
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
ILSLPPAAILDDQSSCGRGERLALALARENINSLMAGSSRARVEVDVYELLKDSHYDTTD
TMCQILPKGVVSVIGPASSPASGSTVSHICGEKEIPHVKIGPEETPKLPYLRFASVTLHP
SNEDLSLAVGSILQSLGEPTASLVCAKAECLLRLEELVHRFLISRETLSVRMLDDGLDPT
PLLKEIRDDKVATIIIDANASISYHILRKANELGMMSAFYKYILTTMDFPLLRLDDVVGE
QSNILGFSMLNVSHPFYLEFIRSLNLSWKEGCHISPYPGPALSSALMFDAVHVVVSAVRE
LNRSQEIGVKPLSCTSPLIWQHGTSLMNYLRMVEYDGLTGHIEFNSKGQRTNYTLKILEK
HPGGHKEIGTWFSNNTLVMNSTSLDLNASETLANKTLVVTTILENPYVMHKSNYQELRGN
ERYEGFCVDMLRELSHTLKFSFRIKLVDDRVYGAPEPNGSWTGMVGELINRKADLAVAGF
TITSEREKVIDFSKPFMTLGISILYRVHLGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCV
LFLAARLSPYEWYNPHPCLRERRDVLENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCV
SGVWWAFTLIIISSYTANLAAFLTVQRMEAPIESPDDLADQTNIQYGTIHGGSTMTFFMN
SRYQTYQRMWNYMNSKQPSVFVKSTEEGIARVLNSKYAFLMESTMNEYYRSLDCNLTQIG
GLLDTKGYGIGMPLGSPYRDEITLGILQLQESNRLEILKRRWWEGGQCPKEEDHRAKGLG
MENIGGIFVVLICGLIIAVFVAIMEFLWSTRRSAETDEVSVCQEMLTEFRNAVSCKKSSR
SRRRRPLSSAGGGVLRHPSRLALATPRPIRLVREMRLSNGKLYSGMGGMGGMGALPDLGP
GPQRLLEDPLGGKAATCVAPPPPASALAAPPAPLRSFLQGCSHVRICQECRRIQSLRPAA
LTPPPPPPPPPPSSSCSRIPPPAGHHLRHNPHHHLHYHHGSMSLPRLPPPPPPIPADRAD
SDGGGGGGAASPRLANAKPPPPPRPLPPPKTPPRPPTDLLTGHN
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
attctctcgctccctccagcggccatcttggatgaccagtcgtcgtgcggccgaggcgag
cgtctggcgctggcgctggcgagggagaacatcaacagcctgatggcgggctcgtcgcgg
gcgagggtggaggtggacgtgtacgagctgctgaaggactcgcactacgacaccactgac
accatgtgtcagatcctgccgaagggcgtggtctctgtgattggccccgcctccagcccc
gcctccgggtccaccgtcagtcacatctgtggggagaaagagatccctcacgtgaagatc
gggccggaggagaccccgaagctgccgtacctccgcttcgcctccgtgacgcttcacccg
agcaacgaggacctgagcctcgccgtgggctccatcctgcagtcgctgggcgagcccacg
gccagcctggtgtgcgccaaggccgagtgcctgctgcgattggaggagctggtccaccgc
ttcctcatctccagggagacgctgtcggtgcggatgctggacgacggcctggacccgacg
ccgctgctgaaggagatccgcgacgacaaagtggcgaccatcatcatcgacgccaacgcc
tccatctcctaccacatcctgcgcaaggcgaacgagctggggatgatgtcggccttctac
aagtacatcctcaccaccatggacttccctctgctccggctggacgacgtggtgggcgag
cagtccaacatcctgggcttctccatgctgaacgtcagccatcctttctacctggagttc
atccgcagcctcaacctgtcgtggaaggaaggctgccacatcagcccgtacccgggcccg
gcgctgtcctcggccctgatgttcgatgccgtgcacgtggtggtgagcgccgtgcgcgag
ctgaaccgcagtcaggagatcggcgtgaagccgctgagctgcacgtctccgctcatctgg
cagcacgggaccagcctcatgaactacctgcgcatggtggagtacgacggtctgacgggt
cacatcgagttcaacagcaaaggccagagaaccaactacacgctgaagatcctggagaaa
cacccgggggggcacaaggagatcggcacctggttctccaacaacacgttggtgatgaac
tccacgtcgctggacctcaacgcgtcggagacgctggcgaacaagacgctggtcgtcacc
accatactggagaacccgtacgtgatgcacaagtccaactaccaggagctgcgcggcaac
gagcgctacgagggcttctgcgtggacatgctgcgcgagctgtcgcacacgctcaagttc
tccttcaggatcaagctggtggacgaccgcgtgtacggagcgcccgagcccaacggcagc
tggacgggcatggtgggcgagctgatcaaccggaaagcagacctggcggtcgccggcttc
accatcacctcggagagagagaaggtcatcgacttctccaaacccttcatgactctgggg
atcagcatcctgtaccgggtccacctgggccgtaagccgggttacttctccttcctggat
ccgttctctccggctgtctggctcttcatgctgctggcgtacctcgccgtcagctgcgtc
ctcttcctcgccgccaggctcagcccttacgagtggtacaaccctcacccgtgcctgcgg
gagcggcgggacgtcctggagaaccagtacacgctggggaacagcctgtggttcccagtg
ggcggcttcatgcagcaaggctccgagatcatgccgagagcgctgtccacgcgctgcgtc
agcggggtgtggtgggcgttcaccctcatcatcatctcgtcctacacggccaacctggcg
gcgttcctgacggtgcagaggatggaggctcccatcgagtcgccggacgacctggcggac
caaaccaacatccagtacggcaccatccacgggggctccaccatgaccttcttcatgaac
tcgcggtaccagacgtaccagcggatgtggaactacatgaactccaagcagcccagcgtg
ttcgtgaagagcacggaggaaggcatcgcccgcgtgctcaactccaagtacgccttcctg
atggagagcaccatgaacgagtactaccgcagcctggactgcaacctcacgcagatcgga
ggcctgctggacaccaagggatacggcatcggcatgccgctgggctctccctaccgagac
gagatcacgttgggcatcctgcagctgcaggagagcaaccggctggagatcctgaagcgg
cgctggtgggagggggggcagtgcccgaaggaggaagaccaccgggccaaaggtctgggc
atggagaacatcggggggatcttcgtggttctgatctgcggcctcatcatcgccgtcttc
gtggccatcatggagttcttgtggtcgacgcggcgctctgcagagacggacgaggtgtct
gtttgtcaggaaatgctgacggagtttcggaacgccgtctcctgtaagaagagttcccgc
tcgcgccgccgccgccctctgagcagcgccgggggcggagtcctgcgccacccgtcgcgc
ctcgctctcgccacgccgcggccgatccgcctggtccgcgagatgcgcctcagcaacggg
aaactctacagcggcatgggaggaatgggcggcatgggagcgctccccgatttggggccg
ggccctcagaggctgctcgaggacccgctgggcggcaaagccgccacctgcgtggcgccg
cctcccccggcgtcggccctggcggcgccgcccgccccgctgcgcagcttcctgcagggc
tgcagccacgtgcgcatctgccaggagtgccggcggatccagagcctgaggccggcggcg
ctcacgcctcccccgccgccgccgccgcctcccccgtcctcctcctgctcccggatccct
ccccccgccggtcaccacctgcgccacaacccccaccaccacctccactaccaccacggc
tccatgtcgctgccccgcctcccgccgccgccccctccgatcccagcggacagagctgac
agcgacggcggcgggggagggggggcggcgagtccgcggctggccaacgccaaaccgccg
ccgccgccgaggccgctgcctcccccgaagacgccgccgcgcccgccgacagacttactg
acgggacacaactga
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