Clinocottus analis (woolly sculpin): 137801439
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Entry
137801439 CDS
T10471
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04010
MAPK signaling pathway
cana04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
137801439 (cacna1ba)
04020 Calcium signaling pathway
137801439 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cana04040
]
137801439 (cacna1ba)
Ion channels [BR:
cana04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
137801439 (cacna1ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
137801439
NCBI-ProteinID:
XP_068454948
LinkDB
All DBs
Position
Unknown
AA seq
2402 aa
AA seq
DB search
MARFEDILSSRYGGSCPAGPARGAGRPPGPPGVQMVYKQTLAQRARTMAIYNPIPVKQNC
LTVNRSLFTFSEDNIIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPASDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGMLATVGADFDL
TTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGK
FHRTCFRIDTDEQAADFPCGLEAPARTCANGTACKEYWTGPNFGITNFDNILFAVLTVFQ
CITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QDFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKSLDGAWYKKKHTNSVLKRA
KKSKNDLINAEEGEDHFTDLSSVAPPGSPFARASLKSKNESSSYFRRKEKRMRFTIRHLV
KSQSFYWTVLCLVGLNTLCVAIVHYDQPDWLTFALYLAEFVFLGLFLAEMSMKMYGLGPQ
NYFHSSFNCFDFGVIIGSIFEVIWAAMKPGASFGISVLRALRLLRIFKVTKYWNSLRNLV
VSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQI
LTGEDWNAVMYHGIESQGGVRRGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELT
KDEEEQEEAINKKLALQKAKEVKEVSPMSATNLSITAFLTRSRGNVHSSSSSICSVNSLS
YVCSPVHHYLSKEQQKSLSVWEQRANQLRRQNQASCERLYSELELEDRLRMSSALHIRPD
MKTHLDRPLVVQPREASLPAGHQHHHHKPCVPEAAMTATNPPPPHKPHHHHRDRDRDQAG
ARQETNDNSGTVKDGGHHVHHSHAKDHEGNRGKEGKSERSRSREEGRRHNHQSSVDDSGG
GGVTSEREHRHHHSHRQSRGGNGTVNSGGRAERRARQKDGRPSNKDGDRPSRGDGGVTGE
RRRHRTPGSKDQSVEGEEYQEREKPRNNRFGDPEGECPAFAPQQGSGTASWPPDQPEDSD
NHRNIKRTGQASMKIPPVTITSPSGDTPFMQMNSMDCETMPMNESGPRPILPYSSMFIFG
QTNPVRRLCHYIVTLRYFEMSILVVITMSSIALAAEDPVWTNAPRNNVLRYLDYAFTGVF
TFEMVIKMVDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSGTKGKDISTIKSLRVLR
VLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDE
SKGLEKDCKGQFLDYDQDEVAAMPREWKKYEFHYDNVLWAFLTLFTVSTGEGWPTVLKHS
VDATFEDTGPSPGYRIEMAIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKALSECSLEK
NERACIDFAINARPLTRYMPQNTQSFQYRMWKFVVSAPFEYSIMIMIALNTIVLMMKFHG
APDFYEAMLKNLNIVFTTLFSLECILKIIAFGPLNYLKDAWNVFDFVTVLGSITDILVTE
INDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAII
GMQVFGNIALNEDTAVNHHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSHRACDERSGS
HGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWA
EYDPAACGRIKYLDMYQMLLHMSPPLGLGKKCPPRVAYKRLVKMNMSIADDNSVHFTSTL
MALIRTALEIKLASGMVAQRLSDAELKKELSTVWPSLSQKTMDLLVTPHKSNELTVGKVY
AALMIFDYYKQNQARKKQQQQQPPGPSVSQEKDLPMVSNSVKPPSMLQPKPQAEPQPPTR
PSSNSLNNGGTLCDCCSRPGYDHSVEASPSWLLEKPNEAPHAKTKRAASRGPSDDAAHAG
ATQESVELIKMETSSSTVPVPGSGLENQGRAASMPRLNAELQTAPDASPMKRSASTVAPQ
RPQEVNLRDYTLEKPNQDRPHHHRHHHHHHHHHRCHHRRDRDRDREKRQRSLDTPLGGQP
SSAGAAGEPASDPAASRERGQDRGRSHDRKHHSSAEKQRYYSCDRYCSREHCHAKSATAS
CAASPSEGQDTSKQCLFFHSVFFHVTCWCLSFPPSLPFLLPFLSYIVPSSFQIACPIFMQ
GSGWVRGSPAAPRSPSSTPGRGRRQLPQTPPTPRPGVAYKTEDSPPARCAPGRRASVSPV
RLSRGVSEHGALRHGARRLPCPVTRISSEPFLGSGSGGGGDALGGLSGSLREQLDVFQDA
GSPTPGAGRSSRTALPRMVGPLQHLGVPNGYHVRLGGSASPGSGVTAHRFYQEAEEEEEE
WC
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atggcccgctttgaagacatcctgtccagccgctatggaggctcctgtcccgcgggcccg
gcccgaggggccggccggccgccggggcctccgggggtccagatggtgtacaagcagacc
ttggcccagagagccaggaccatggccatctacaaccccatcccggtcaaacagaactgc
ctcaccgtcaaccgctctctgttcaccttcagcgaggataatatcatacggaaatatgcc
aagaggatcaccgagtggcctccatttgagtacatgatcctggccaccattatagcaaac
tgcatcgtgctggccttggagcagcacctgccggcctcagacaaaactccaatgtcagag
cgtttggacgacacggagccctacttcattggaatattttgttttgaggctggcatcaag
atcatcgcgctgggctttgccttccacaaaggctcctacctgcgtaacggctggaatgta
atggacttcgtggtggtcctaacaggcatgctggccaccgtgggagccgactttgacctg
accacgctgcgggcggtgagagtgctgcggccgctgaaactcgtctctggcattccaagt
cttcaggtggtgttgaagtccatcatgaaagccatggtgcctctgctgcagatcggcttg
ctgctcttctttgccatcctcatgttcgccatcatcggccttgacttctacatgggcaag
ttccatcgcacctgcttcagaatcgacacagacgagcaggcagcagacttcccctgcggc
ctggaggctccagccaggacctgcgccaacggcacagcctgcaaggagtactggaccgga
cccaactttggcatcaccaactttgacaatatcctcttcgcagttctcacggttttccag
tgcatcacgatggagggatgggtggacatcctgtacaacgccaacgatgcttcagggaac
acgtggaactggctgtacttcatccccctcatcatcatcggctccttcttcatgcttaac
ctggtgttgggtgtgctgtcaggggagtttgccaaagagagagagcgggtggagaagaga
caagacttcctgaagctccgcagacagcagcagatagaaagagagttaactgggtacctg
gagtggatttgcaaagcagaggaggtgatgctggctgaggaagacaagaacgcagaggag
aaatctctggatggagcgtggtacaaaaaaaaacacaccaactctgtgctgaaacgagcc
aagaagagtaagaatgacctcatcaacgcagaggaaggcgaggaccacttcactgacctc
tcatctgttgcccccccagggtcgccgttcgcccgagccagcttgaagagcaagaacgag
agctcgtcctacttcaggaggaaagagaagaggatgcgcttcacgatccgccacctggtg
aaatcccagagcttctactggaccgtgctgtgtttggtcggcctcaacacgctgtgtgtc
gccatcgtccactacgaccagcccgactggctcaccttcgccctctacctcgcagagttt
gtcttcctgggcctgtttctggcagagatgtccatgaagatgtacggcctcggaccgcag
aactacttccactcatccttcaactgctttgactttggggtgatcatcggcagtatcttc
gaggtgatctgggccgccatgaaacccggagcttcctttgggatcagcgtcctgcgagcg
ctgaggctgctgaggatcttcaaagtcacaaagtactggaactccttgaggaacctggtc
gtatcccttctcaactccatgaagtccatcatcagcctgctgttcctcctcttcctcttc
atcgtggtcttcgctctactgggcatgcagctgttcgggggccaatttaattttgaagac
gaaactccgaccaccaactttgacaccttcccggcggcgatcctcaccgtgttccagatc
ctcacgggggaggactggaacgccgtcatgtaccacgggatcgagtcccaggggggcgtc
cgcagaggaatgttctcctccatttacttcatcgtcctcactctctttggaaactacacg
ctcctcaacgtgttcctggccatcgctgtcgataacctcgcaaacgcccaggagctcacc
aaggacgaagaggagcaggaggaggccatcaacaagaagctggcgctccagaaggccaaa
gaggtgaaggaggtcagccccatgtcggccaccaacctctccatcacagcttttctaaca
cgcagtcgaggtaacgtgcactctagcagctcatccatctgcagcgttaactcactgagt
tatgtctgctctccagtccatcactacctgagcaaggagcagcagaagtctctgtctgtg
tgggagcagagggccaaccagctgaggaggcagaaccaggccagctgcgagcgcctctac
agcgagctggagctggaggatcggctccgcatgtcgtcagcgctccacatccggcccgac
atgaaaacacacctcgaccggccgctggttgttcagcctcgcgaagcgtctttgcctgcc
ggtcaccagcaccaccatcacaagccctgcgtgccagaggcagccatgacggccaccaac
cctcctcctcctcacaagcctcaccaccaccacagagacagagacagggaccaagctgga
gccagacaggagacgaatgataacagcggcaccgttaaggacggaggccaccacgtccat
cacagccacgccaaagaccacgaaggcaaccggggcaaagaggggaagagcgagaggtcc
cgcagccgagaggaaggcaggaggcataaccatcagagctcagtggatgacagcggaggg
ggtggagtcacaagcgagagagagcatcgacatcatcattcacaccggcagtccagaggc
ggcaacgggacggtgaacagtggaggcagggcagagcgaagagcccgccagaaagatgga
cgtccgtctaacaaagatggagatcgaccttccagaggagacggtggagtcactggagag
aggaggagacatcggactcctggatccaaggaccaatcagttgaaggagaggagtaccaa
gaaagagagaagcctcgcaataacaggtttggggacccagagggggagtgccctgccttt
gctccccagcagggctctggtacagccagctggcctccagaccaaccagaagactcagac
aaccacaggaacatcaagagaacgggccaggcgtcaatgaagattcctcctgtgactatc
acctccccatctggagacacccccttcatgcaaatgaacagtatggactgtgagacgatg
cccatgaatgagagcggacccagacccatcctgccttacagctccatgttcatctttgga
caaaccaatccggtgaggcggttatgtcactacattgtgactctgcgttactttgagatg
tccatcctggttgtcatcaccatgagcagtattgctttggctgcagaggaccccgtgtgg
accaacgccccgcgcaacaatgtgctcagatatctggactacgcctttactggtgtgttc
acgtttgaaatggtgatcaagatggtggacctcggcctgctgctccaccctggagcttac
ttcagagacctgtggaacattctggacttcatcgtggtcagtggggcgctggtggctttt
gcattctcaggaaccaaaggaaaagacatcagcaccatcaagtccctgagggtcctcagg
gtgctgcggccgctcaaaaccatcaagcggctgccaaaactcaaggcggtgttcgactgt
gtggtcaactctttaaagaacgtgctgaacatcctcattgtttacatcctcttcatgttc
atcttcgccgtcatcgcagttcagctcttcaaggggaaattcttttactgcacagacgag
tccaagggcctggagaaggactgcaaagggcagttcctggactacgaccaggacgaggtg
gccgccatgccgagagagtggaagaagtatgagttccactatgacaacgtactgtgggcc
ttcctcaccctcttcacggtctccactggggagggatggccaaccgtcttgaagcactct
gtggatgctacttttgaagacacgggtcctagtccaggctaccggatagaaatggccatc
ttctatgtcgtctactttgtggtcttccctttcttttttgtgaacatctttgtcgctctc
atcatcatcaccttccaggagcagggagacaaggccttgtctgagtgcagcttggaaaag
aatgagagggcttgtattgactttgccataaacgccagacctctgacacgctacatgccc
cagaacacgcagtccttccagtacagaatgtggaagtttgtggtctccgctccatttgag
tactccatcatgatcatgatcgctctcaacaccatagtgctcatgatgaagttccacgga
gctccagatttctatgaggcgatgctgaagaacctaaacatagtcttcaccacgctcttc
tctctggagtgcatcctcaagatcattgcttttggtcccttgaactacttaaaagatgcc
tggaacgtgtttgactttgtcacagtgttgggcagcatcaccgacatcctggtgactgaa
atcaatgaccggctgctgaacctgagcttcctgaggctgttcagagccgctcggctcatc
aagctgctgagacagggctacaccatccgcatcctgctgtggaccttcgtccagtccttc
aaggccctgccttatgtttgccttctgatcgccatgctgttcttcatttacgccatcatt
gggatgcaggtgtttggcaacatcgcgctgaatgaagacacagctgtcaatcaccacaac
aacttccggacgttcctccaggcgctcatgctgctgttcaggagtgcaacgggcgaggcc
tggcacgagatcatgttgtcctgtttgagccaccgggcgtgtgacgagcggtccggctcc
cacgggaaagaatgtggcagtgactttgcctacttctactttgtctccttcatcttcctc
tgctcctttctgatgctgaacctgtttgtggcggtcataatggataactttgagtacctg
accagagactcctccatcctgggacctcatcacctcgatgagttcatccgggtttgggcc
gagtacgacccggctgcctgtggccgtatcaagtacctcgatatgtatcagatgctgctc
cacatgtccccacccttaggtttgggaaagaaatgtccaccaagagtcgcctacaagcgc
ctcgtcaaaatgaacatgtccatcgctgatgacaacagtgtccacttcacctccaccctg
atggccctgatacgtactgccctcgagatcaaactggcctcaggcatggtggcgcagcgc
ttatccgacgctgagttgaagaaggagttgtcgacagtgtggcccagtctgtctcaaaag
accatggatctgttggtgacgccacataaatccaatgaactgacggtagggaaggtttat
gcggccctgatgatcttcgactactataagcagaaccaggcgaggaagaagcagcagcag
cagcagcctccaggcccgtcagtctcccaggagaaagacctgccgatggtgtccaacagc
gtgaagcctcccagcatgcttcagcccaaaccccaggccgagccccagccaccgaccagg
ccgagctccaactccctcaacaatggcggcacgctctgtgactgctgcagcaggcccggt
tatgaccacagcgtcgaggcctcgccttcctggctgctggagaaacccaacgaagcgccg
cacgcgaagacgaagagagcggcgtccagaggcccgtcagatgacgcagcgcacgccggc
gccacgcaggagtcggtggagttgataaagatggagaccagcagcagcacggtcccggtg
cccggctccggtctggagaaccagggccgagcagcttctatgcctcgcctgaacgctgag
ctgcagactgctcctgacgccagtccaatgaagcgctcagcctccactgtggccccacag
cgaccccaggaggtcaacctgagggactacaccctggagaagcccaaccaggaccggccc
caccaccaccgccaccaccaccatcaccaccaccaccaccgctgccaccaccgccgagac
agagaccgagaccgagagaagaggcagaggtctctggacacacctctggggggacagccc
agctctgctggcgcagcaggagagccggcgtccgacccggccgcctccagggagcgaggc
caggaccgcggacgttcccacgacaggaagcaccattcctcagccgagaagcagcgctac
tactcctgcgaccgctactgcagccgggaacactgccacgccaagtctgccaccgccagc
tgtgccgcctcccccagcgagggccaggacaccagcaagcagtgcttgttctttcactct
gtcttcttccatgttacatgttggtgtctttcctttcctccttctctccccttccttctt
cctttcctttcttacatcgttccctcatcgtttcaaattgcttgtcccattttcatgcag
ggcagtggttgggttagaggcagcccggcggcaccgcgttccccttcgagcacgccgggc
cgcgggcgccggcagctcccccagaccccgcccaccccgcggcccggggtggcctacaag
accgaggactcgccccccgcgcgctgcgcgcccggccgccgggcctctgtgagtcctgtc
cggctgagccgcggcgtgtcggagcacggcgccctccggcacggcgcccgccgcctcccc
tgccccgtcacccgcatcagctccgagcccttcctcggcagcggctccggcggcggcggc
gatgctctgggcggcctgtccggcagcctcagggagcagctggacgtcttccaggatgcg
gggtcaccgacgcccggcgccggccgctcatctcggaccgcactgccccgcatggtggga
cccctgcagcacctcggggtgcccaacgggtaccacgtccgcttaggggggagcgccagc
ccgggctctggcgtcacggctcacaggttctaccaggaggcggaggaggaggaggaggag
tggtgctag
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integrated database retrieval system
