Clinocottus analis (woolly sculpin): 137801674
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Entry
137801674 CDS
T10471
Name
(RefSeq) ATP-dependent RNA helicase DDX19B-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03013
Nucleocytoplasmic transport
cana03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137801674
03015 mRNA surveillance pathway
137801674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137801674
Enzymes [BR:
cana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137801674
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
137801674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Motif
Other DBs
NCBI-GeneID:
137801674
NCBI-ProteinID:
XP_068455122
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MATDSWAQAVDEQEAAADSIGSLQLNDKPEENGTAANAPESSSAAAAKPEVQEGETKGTD
EDDTDKDDKAAQSLLNKLIRNNLVNNTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGV
YGMGFNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNKTYPQCLC
VSPTYELALQTGKVIEQMGKHYPEVSLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCGK
FKFIDPKKIMVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEETVWNFAQR
IVPEPNIIKLKREEETLDTIKQYYVMCNSREEKFQALCNIYGAITIAQAMIFCHTRKTAG
WLAGELSRENHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVCARGIDVEQVSVVIN
FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDGKMSMNILNRIQEHFSKRIEKLD
TDDLEEIERISS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggccacggactcctgggcgcaagcggtggacgagcaagaagccgcggcggattcgata
ggtagcctccagttaaacgacaaaccagaggaaaatggcacggctgcaaatgcaccagag
tccagcagtgctgccgctgcaaagccagaagtgcaggaaggagagaccaagggaaccgat
gaagatgacactgacaaagacgacaaagcggctcagtcgttactgaacaagctgatccgg
aataatctcgtcaataacacgaatcaagtggaagttcttcagaaggatcccaactctccg
ctctactccgtcaagtcctttgaggagttgcgactcaaacctcagctgcttcagggcgtg
tacggcatgggtttcaacagaccatccaaaattcaggagactgccttaccgatgatgctg
gccgagcctccacagaatctgattgctcagtcgcagtcgggtacggggaaaactgctgcc
ttcgtcctggcgatgctcagtcatgtagatcccaacaaaacatatccccagtgcctgtgt
gtgtcgcccacctatgaactggctcttcagaccggcaaggtgatcgagcagatgggcaaa
cactatcctgaggtcagcctcgtctacgccatcagagggaacaaattgcagcggggcatg
aagctgcaggagcagatagtgatcggcacacctggtaccatgctggactggtgcggcaaa
ttcaagttcatcgaccccaagaagatcatggtgtttgtgctcgacgaggccgacgtcatg
atcgccacgcagggtcaccaggaccagagcatccgcatccagaggatgctccctaaaaac
tgccagatgttgttgttctcggccacgtttgaagagacggtgtggaacttcgcccagcgc
atcgtgccagagcccaacatcatcaagctgaagcgggaggaggagacgctggacaccatc
aagcagtactacgtgatgtgcaacagcagggaggagaagttccaggccctctgcaacatc
tacggcgccatcaccatcgcccaggccatgatcttctgccatacgaggaagacggcgggc
tggctggcaggagagctgtccagagagaaccaccaggtggcgctgctcagtggagagatg
caggtggagcagagggccgccgtcatcgaccgcttcagagacggcaaggagaaggtcctg
gtcaccaccaacgtctgtgcccgaggcatcgatgtggagcaggtttccgtggtgatcaac
tttgacctgccggtggacaaggacggtaaccctgacaacgagacgtacctgcacaggatc
ggtcgcacggggcgattcggcaaaagagggctggccatcaacatggtggacgggaagatg
agcatgaacatcctgaaccggatccaggagcatttcagtaagaggattgagaagctggac
acggatgatctggaggagattgagaggatctccagctag
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