Clinocottus analis (woolly sculpin): 137801818
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Entry
137801818 CDS
T10471
Symbol
abca5
Name
(RefSeq) cholesterol transporter ABCA5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
137801818 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cana02000
]
137801818 (abca5)
Transporters [BR:
cana02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
137801818 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
MMR_HSR1
Pullulanase_Ins
ABC2_membrane
Motif
Other DBs
NCBI-GeneID:
137801818
NCBI-ProteinID:
XP_068455299
LinkDB
All DBs
Position
Unknown
AA seq
1675 aa
AA seq
DB search
MYFIPEGGIRETTSGPYVIPMRHAGSMQPAHRRDAGVWHQTRSLLYKNLLIKWRTKQQSL
QELILPLLLLGLLIVISVLNPHVYYGGISTMELERDDHFLKGLGYTPISNVTTHIMEEVA
QEMHMQDRLESFASEEDLENASLYEPSSYVGVVFMDSSASSYRLRFPYNQLPFPSDDTES
IANCFTSSVNCRAANYWYSGFIRLQSLIDAAVIQMQTKRSVWSEMDLKVVMMGQPGSVEV
QKFPHALISIYLVLAFTPFVTFLIVNVAAEKEHRLKDTMTMMGLYDTSFWLSWGLLYAAL
VTAMSVLMSVIATYTALFPNSDFLVVFFLIFLYGISSIFFSFMLTPLFKKPKLASTVGSM
LTVVFGCLSLFTVLMEDFPQPLVWLLCLLSPSAFSIGIAQVVNLEAQGDGAVFSSLANGP
HPLYVPLLMLVVDCVLYLLLALYLDQVLPGEFGMRRSLLYFLKPSYWSKRRKRYVEVSSL
YDADPKGAPAGDESVEPVSPEFRGKEAIRISNIHKVYKEKDNVVEALRGLTFDIYEGQIT
ALLGHSGAGKSTLMNVLCGICPPTAGSASIYGASVAELADGSDMKQLVGVCPQFNIIFDV
LTVEEHLRIFAAIKGIPPSDVDAEVSKVLKDLDLEKIKMAQAKNLSGGQKRKLSVGIAIL
GDPKILLLDEPTAGMDPCSRHQVWSLLRSRRAGRVTVLSTHYMDEADILADRKAVISQGQ
LKCVGSSMYLKVKCGVGYHLRMSIDERCEAEKISSLVEQHVPKAKLTRQHETELTFTLPF
ESMDTFSGLFAQLDLRPALGITNYGVSMTTLEDVFLRLEAKAEVDQADYSVFNREPAEDE
CDGVSVDDTDQRLLAFSDGKPSASVSGRALWRQQFGAVAWLHMLNMRRERKAFVFTLALF
LVFVVAVLVLSVFTGNIQIHSPDRQFLPVYLLKKDQVQRRYATSLLVQNSSGSDISDFIH
NLQSQDIRVEVMKHGDYMAVAPHSAAINVTGSSKGFKYSVAFNSTTVHSLPMAVNILSNA
LLRGLNGTGRIRTWTKPFDYQIPDATSYALVSIEAIILGMLAAGMPAYFAMDHTRDREIK
CRSTLRISGLAPSAYWCGQAAVDVPFYYLILSSMTVILFSFHTGNLLTSSNLTAVVLCTV
AFGPAMILFTYVSSFGFARVQSNKDFFSVISMMVCVVSASLVQLSFVNGNPELTRNLHNI
LCFLNPLYPLMGCLNCITKATFLHSLFEENFLWKNLIVSVIAPYLQCILLLLLLRWLEIR
YGGRTVGSMSCMSKPKAEKHLEDGLSEDEDVQMEKARVKEALSCQSCEEKPAVVVSNLRK
QYSGRREGFSLNKTRKVAAKNVSFCVRKGEVLGLLGPNGAGKSSIMHMLAGDTEPTAGQI
LMGDYGTDFLPVDAPLQQVGYCPQVNPLWPRITLQEHLEIHAAIKGLRGEDVPGIVKRVV
NALELKKHLHKQAKTLSAGLKRKLCFALSMIGNPQIVLLDEPSSGMDPKSKQRMWRAIRA
AFKNRQRGAVLTTHYMEEAEAVCDRVAIMVSGRLRCIGSIQHLKGKYGRGYSLEVKLREE
LTGLQQVALLHKEILRIFPHAARQESFATLMVYKIPMEDVKSLAESFCQLERAKQNFNFE
EYNFSQSTLEQVFMEFAKEQESEEEELGSLSTTFQWQRLRQDVPANHAESVVHQL
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcatacctgagggcggcatcagggagacgacttctggcccgtacgtcatcccc
atgaggcatgcaggcagcatgcagcccgcgcacagacgagacgccggagtctggcaccag
acgaggagtctgctctacaagaacctgctcatcaagtggaggaccaagcagcagagcctc
caggaactgatcctccctctgctcctgctgggcctcctgatcgtcatcagcgtcctgaat
cctcacgtttactacggcggcatcagcaccatggagctggagcgcgacgaccacttcctg
aaggggctgggctacacgcccatcagcaacgtcaccacccacatcatggaggaggtcgcc
caggagatgcacatgcaggaccgtctggagagctttgccagtgaggaggacctggagaac
gccagcctgtacgagccctccagctacgtgggcgttgtgttcatggacagctcggcctcg
tcgtaccggcttcgcttcccctacaaccagctgccgttccccagcgacgacacggagtcc
atcgccaactgcttcaccagctcagtgaactgcagagcagcaaactactggtactccggc
ttcatccgcctccagtcgctgatcgacgcagccgtcatccagatgcagaccaagcgctcg
gtgtggagtgagatggacctgaaggtggtgatgatggggcagcccggctccgtggaggtg
cagaagttcccgcacgccctcatctccatctacctggtgctggccttcacgcccttcgtc
accttcctcatcgtcaacgtggcggccgagaaggagcatcgcctcaaggacaccatgacc
atgatggggctgtacgacacctccttctggttgtcgtggggcctgctgtacgcggcgctg
gtgaccgccatgtccgtcctgatgtccgtcatcgccacgtacacggctctgttccccaac
agcgacttcttggtcgtcttcttcctcatcttcctctacgggatctcatcgatcttcttc
tccttcatgctcactccgttgttcaagaagcccaagctggccagcacggtgggctccatg
ctgacggtggtgttcggctgcctgtcgctgttcacggtgctgatggaggacttccctcag
ccgctggtgtggctgctgtgcctgctgtcgcccagcgccttctccatcggcatcgcacag
gtggtgaacctggaggcgcagggcgacggcgccgtgttctcctcgctggccaacgggcct
caccctctctacgtgccgctgctcatgctggtggtggactgcgtcctctacctgctgctg
gcgctctacctggaccaggtgctgcccggtgagtttgggatgaggcggtccctgctgtac
ttcctgaagccgtcctattggtccaaacgcaggaagcgctacgtggaggtgagctcgttg
tacgacgccgacccgaagggggcgcccgccggcgacgagtccgtcgagccggtttccccc
gagttcagagggaaggaggccatccgcatcagcaacatccacaaagtgtacaaggagaag
gacaacgtggtggaggccctgagaggtttgaccttcgacatctacgagggtcagatcacg
gcgctgctgggtcacagcggcgccgggaagtccacgctcatgaacgtcctgtgcggcatc
tgcccgcccaccgccggctccgcctccatctacggcgcctccgtggcggagctggcggac
ggctcggacatgaagcagctggtgggcgtctgccctcagttcaacatcatcttcgacgtg
ctcaccgtggaggagcacctccggatattcgccgccatcaaagggatcccgccctccgac
gtcgacgccgaggtcagcaaggtgctgaaggacctggacctggagaagatcaagatggct
caggccaagaacctgagcggcggccagaagaggaagctctccgtggggatcgccatcctg
ggggatcccaagatcctgctgctggacgagcccaccgccggcatggacccctgctcccgc
caccaggtgtggtcgctgctgaggagccgcagggccggccgggtcaccgtgctcagcacg
cactacatggacgaggccgacatcctggccgatcgtaaagctgtgatctctcaaggtcag
ctgaagtgtgtcggctcctcgatgtacctcaaggtgaagtgtggcgtcgggtatcatctc
aggatgtccatcgacgagcgatgtgaagcggagaagatctcgtcgctggtcgagcagcac
gttcccaaggccaagctgacccggcagcatgagaccgagctcaccttcacgctgcccttt
gagagcatggacacgttttcaggtttgttcgcgcagctcgacctccgacccgctctggga
atcaccaactacggggtttccatgacgacgctggaggatgttttcctccgcttggaggcg
aaggccgaagtggaccaagccgactacagcgtgttcaaccgcgagccggcggaggacgag
tgcgacggcgtctccgtggacgacacggaccagcggctgctggcgttctcggacggcaag
ccgtcggcctccgtgtcgggtcgcgccctgtggcgccagcagttcggcgccgtggcctgg
ctgcacatgctcaacatgcggcgcgagaggaaggccttcgtcttcaccctggccttgttc
ctggtgttcgtcgtcgccgtgctcgtcctctcggtgttcacggggaacatccagatccac
tccccggaccgccagttcctgcccgtctacctgctgaagaaggaccaggtgcagcggcgg
tacgccaccagcctcctggtgcagaactcctcaggttctgatatttccgacttcatccac
aacctgcagtctcaggacatcagagtggaggtgatgaagcacggcgactacatggccgtg
gcgccgcacagcgccgccatcaacgtgacgggatccagcaagggtttcaaatacagcgtt
gcgttcaacagcaccaccgtccactcgctgccgatggccgtcaacatcctgagcaacgct
ctcctgaggggcctgaacgggaccggacggatccggacctggaccaagccgtttgactac
caaatcccggacgccacgtcctacgctctggtgtccatcgaggccatcatactggggatg
ctggcggcgggaatgccggcgtacttcgcgatggaccacacccgagaccgagagatcaag
tgtcgctcgactcttcgtatctcgggtctggcgccgtcggcctactggtgcggccaggcg
gccgtggacgtccccttctactacctcatcctctccagcatgaccgtcatcctcttctcc
ttccacaccgggaacctgctcacctccagcaacctcaccgccgtggtcctgtgcaccgtc
gccttcggtccggccatgatcctcttcacgtacgtgtcttccttcggcttcgcccgagtc
cagagcaacaaggatttcttctccgtcatctccatgatggtgtgtgtggtgtcggcctcg
ctggttcagctgtcgtttgtgaacggcaaccccgaactgacccgaaatctgcacaacatc
ttgtgtttcctcaaccctctgtaccctctgatgggctgcctcaactgcatcaccaaggcg
accttcctgcactctctgtttgaggagaacttcttgtggaagaacctcatcgtttcagtc
atagctccgtacctgcagtgcatcctgctgctgctgctgctccgctggctggagatccgt
tacggaggaaggaccgtcggcagcatgtcgtgcatgtcgaagcccaaagcggagaagcac
ctggaagacgggctgagcgaggacgaggacgtccagatggagaaggcccgagtgaaggag
gcgctcagctgccagtcctgtgaggagaagccggcggtggtggtgagtaacctgaggaag
cagtacagcggccgcagagaaggtttctctctcaacaagaccaggaaagtggccgccaag
aacgtctccttctgcgtccgcaaaggtgaagttcttggcctgttgggccccaacggagcc
ggaaagagctccatcatgcacatgctggcaggagacacggagccaacggccggacagatc
ctgatgggggactacggcacagacttcctcccggtggacgcccccctgcagcaggtgggc
tactgtccccaggtgaacccgctgtggccccgcatcaccctgcaggagcacctggagatc
cacgccgccatcaagggcctgaggggcgaggacgtgccgggcatcgtcaagcgagtggtg
aacgctctggagctgaagaagcacctgcacaagcaggccaagacgctgtcggccggactg
aagaggaagctgtgtttcgccttgagcatgatcgggaatcctcagatcgtcttgctggac
gagccgtcttcagggatggaccccaagtccaaacagcgcatgtggagagcgattcgcgcc
gctttcaagaaccggcagcgcggcgccgtcctcaccacgcactacatggaggaggccgag
gccgtgtgcgaccgcgtggccatcatggtgtccggccggctgaggtgcatcggctccatc
cagcacctgaaggggaagtacggccgcggctacagcctggaggtgaagctgcgggaggag
ctgacgggcctccagcaggtggcgctgctgcacaaagagatcctgagaatcttcccgcac
gccgcccggcaagagagctttgcaactctgatggtttacaagatccccatggaggacgtg
aagtcactggccgagtccttctgtcagttagagagggcaaagcaaaacttcaactttgag
gagtacaacttctcccagtcgaccttggagcaggtgttcatggagttcgccaaggagcag
gagagcgaggaggaggagctcggctccctcagcacgaccttccagtggcagcgtctgcgg
caggacgtccccgccaaccacgccgagagcgtcgtgcaccagctttaa
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integrated database retrieval system
