Clinocottus analis (woolly sculpin): 137802041
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Entry
137802041 CDS
T10471
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03013
Nucleocytoplasmic transport
cana03015
mRNA surveillance pathway
cana03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137802041 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
137802041 (eif4a3)
03015 mRNA surveillance pathway
137802041 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137802041 (eif4a3)
03041 Spliceosome [BR:
cana03041
]
137802041 (eif4a3)
03009 Ribosome biogenesis [BR:
cana03009
]
137802041 (eif4a3)
03012 Translation factors [BR:
cana03012
]
137802041 (eif4a3)
Enzymes [BR:
cana01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137802041 (eif4a3)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137802041 (eif4a3)
mRNA cycle factors
Stress granule specific factors
137802041 (eif4a3)
Spliceosome [BR:
cana03041
]
Complex C
Other components
EJC/TREX
137802041 (eif4a3)
Ribosome biogenesis [BR:
cana03009
]
Eukaryotic type
90S particles
Helicases
137802041 (eif4a3)
Translation factors [BR:
cana03012
]
Eukaryotic type
Initiation factors
eIF-4
137802041 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
137802041
NCBI-ProteinID:
XP_068455662
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MAAVGLQRKRLLRDEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQ
RAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVL
LALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRSLRTRAIKMLVL
DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDEL
TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSS
MHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIG
RSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtcgggctgcagaggaagaggctcctgcgggacgaggacatgaccaaggtg
gagttcgagaccagcgaggaggtggacgtcacccccaccttcgacacgatgggcctccgg
gaggacctactccgcggcatctacgcttatggttttgagaagccgtcagcgatccagcaa
agagccatcaagcagatcatcaagggccgggacgtcatcgcccagtctcagtctggaaca
gggaagacggccaccttctgcgtgtcggtgctgcagtgtctggacatccaggtccgggag
acccaggccctgatcctcgctcccaccagagagctggccggacagatccagaaggtgctg
ctggctctgggggactacatgaacgtccagtgccacgcctgcattggagggaccaacgtg
ggcgaggacatcaggaagctggactacggtcagcacgtcgtctcagggaccccaggacgg
gtgtttgatatgattcgccgcaggagtctgaggaccagagccatcaagatgctggtcctg
gacgaggcggacgagatgctcaacaaaggtttcaaggagcagatctacgatgtgtaccgg
tacctgcctccggccacgcaggtggtcctgatcagcgccacgctgccccacgagatccta
gagatgaccaacaagtttatgacagacccgatccgcatcctagtcaaacgagacgagctg
accctggagggcatcaagcagttcttcgtggccgtggagagagaggagtggaagttcgac
acgctgtgcgatctgtacgacacgctgaccatcacgcaggccgtcatcttctgcaacacc
aagaggaaggtggactggctgacggagaagatgagggaggccaacttcacggtttcctcg
atgcacggagacatgccccagaaggagagggagtccatcatgaaggagttcagatcagga
gccagtcgtgtgttgatctctacggacgtttgggctcgaggtctcgacgttcctcaagtt
tctctgatcatcaactacgacctgcccaacaaccgagagctctacatccacaggattggt
cggtccggccgctacggccgtaagggcgtggccatcaactttgtgaagaacgacgacatc
cggatcctgcgggacatcgagcagtactactccacccagatcgacgagatgcccatgaac
gtggccgatctgatctga
DBGET
integrated database retrieval system
