Clinocottus analis (woolly sculpin): 137802061
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Entry
137802061 CDS
T10471
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137802061
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cana04812
]
137802061
Cytoskeleton proteins [BR:
cana04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
137802061
Intermediate filaments
Intermediate filament-binding proteins
137802061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
CAMSAP_CH
PMC2NT
BORCS6
CH_2
SOS1_NGEF_PH
NAPRTase_C
Motif
Other DBs
NCBI-GeneID:
137802061
NCBI-ProteinID:
XP_068455687
LinkDB
All DBs
Position
Unknown
AA seq
2349 aa
AA seq
DB search
MTTVAAEFDHMELQQQYSSNDTVNNRWDEEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRISDLYVDLRDGRMLIKLLEVLCGERLPKPTKGRMRIHCLENVDKA
LQFLKEQRVHLENMGCHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDAL
LLWCQMKTAGYSNVNIRNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAFN
LAEQHLGLTRLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIE
TEKMVEKYESLASDLLEWIEQTIIILNNRKFANSLGGVQQQLQAFNTYRTVEKPPKFTEK
GNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRMELIRQEK
LEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDVTAYEERVQ
AVVSVAKELEVEHYHDIKRVTARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEMLY
IMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVTAVGTNATKYSVNDD
GYKPCDPQVIQDRVSHLEFCYQELTQLAAERRAHLEESRRLWKFFWEMAEEEGWIREKEQ
ILSSVEHGKDLTGVLRLLSQQRALEDEMSGRAGHLRHTIEEGQVMVQTDHFAATKIQERI
DDLQAQWAALERLAAVRRKRLQEALALHQFQADADDVDAWTLDALRIVSSGETGHDEFST
QALFRKHKDAAAEVTSYRPVIDSLHEQAALLPQEEAESEEVRGRLSGIEERHKEVTELTK
LRKQALQDALALYKMFSEANACEVWIDEKEQWLNSMEIPEKLEDLEVVQHRFESLEPEMN
NQASRVAVVNQIARQLMHNGHPSEKDIKTQQDKLNNRWSQFRDLVDQKKESLNSALGVQN
YHLDCNETKSWIKEKTKVIESTEELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGEA
QRLAEEHPDQAKAITGRMAEITAVWEEMKNTLKNREESLGEARKLQQFLRELDDFQTWLA
RTQTAIASEDMPNTLAEAEKLMAQHEGIKNEIQNYEEDYQKMRDMGEMVTQGQTDAQHMF
LRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPA
TLEGAEAAIKKQEDFMTTMDANEDKLNGVVEAGRRLASDGNINAERIQERVASVDDRHKR
NREAAVELLMRLKDNRDLQRFLQDCQELSLWINEKMLTAQDMTYDEARNLHSKWLKHQAF
MAELQSNKEWLDKIQKDGMLLVSEKPETEAVVKEKMAALHTKWEELESTTQTKAQCLFDA
NKAELFTQSCADLDKWMEGLEGQIQSDDYGKDLTSVSILLKKQQMLEKQVEVRQKEVVEL
QTQVKALGQEVQDPEEVDGRRQLVEDKFQELLEPLRRRKNFLVQSREVHQFHRDVEDEIL
WVQERMAVATSSDHGHNLQTVQLLIKKNQTLQKEVQGHQPRIDDILQRSQSLLKDEVRQR
LDDLQQLWRRLTEEAELRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDELS
AVTMQKKHQIVEQAVEDYAETVHQLSKTSRGLVADGHPESERISMRQSQVDKLYAGMKDL
SEERRGKLDERLRLFQLNREVDELEQWVAEREVVAGSHELGQDYEHVTMLQERFREFSRD
TGHIGQERVDAVNRLADGLINTGHGDAATVAEWKDGLNEAWADLLELVDTRTQILAASFE
LHRFYHDGKEVLGRILDKQKKLPEEAGRDQNTVETLQRMHSAFQHDVQALGAQVRQLQED
AVRLQSAYAGDKADDIQRRESEVLEAWRGLLEACDGRRVRLLDTGDKFRFFSTVRDLTLW
MDDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFSACIELGKSLLARKHYASE
EIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQESYLCSRQVG
QSVSEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRRPPTPELL
IQQEEEAQPQSGLPQTGPPQTGPPQTGPLQTGPPWDQDSPRDGELVNGVGERSSKEPSPG
SSPASGRKRTSQSSTLPPRDQDSQLPPRDQDSQLEGLLHRKHEWEGPNKKASNRSWHNVY
CVLNHQEMCFYKDSKAAAQRVHYHNQVPVDLKAAACNVATDYKKKKHVFKLRVPDGNEFL
FQAKDEEDMSTWIQAILDAGSSPGTPASGRAQTLPAAVTPATESSPGKREKDKEKDKEKR
FSLFSKKKQ
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtggccgccgagttcgaccacatggagctgcagcagcagtacagcagcaac
gacacggtgaacaaccgctgggacgaagaatgggacaacgagaacagctcggcccgcctc
ttcgaacgctcccgcatcaaggcgctggcagatgagcgcgaggcggtccagaagaagacc
ttcactaagtgggtgaactctcacctgtccagagtctcgtgcaggatctcagacctctac
gtggacctgagggacggacgcatgctcatcaagctgctggaggtgctgtgtggggagagg
ctgcccaagcccactaaaggccgcatgcggatccactgcctggagaacgtggacaaggct
cttcagttcctgaaggagcagcgggttcacctggagaacatgggctgccatgacatcgtg
gacgggaaccaccgcctcacgctgggcctcatctggaccatcatcctgcggttccagatc
caggacatcagcgtggagactgaagacaacaaagagaagagatcagctaaagacgctctg
ctgctgtggtgtcagatgaagacggccgggtattccaatgtgaacatccgtaacttcagc
accagctggagagatggcatggccttcaacgccctgatccacaagcaccgacccgatttg
attgattttgacaaactgaaaaagtccaacgctcaccacaacctgcagaacgccttcaac
ctggcggagcagcacctgggcctgacccggctgctggacccagaggacatcagcgtggac
catcctgatgagaagtccgtcatcacctacgtggtgacgtactatcactacttctccaag
atgaaggctctgaaggtggagggcaaacgcatcggaaaggtgttggataacgccatcgag
acggagaagatggtggagaagtacgagtctctggcctcagacctgctggagtggatcgaa
cagaccatcatcatcctcaacaacaggaagtttgccaactctctgggtggagtccagcag
cagcttcaagccttcaatacctaccggacagtggagaaacccccgaagttcacagagaag
ggaaacctggaggtgcttctgttcaccatccagagtaagatgagagccaacaaccagaag
gtttacatgccccgagagggaaagctcatctcggatatcaacaaggcctgggagcgcctg
gagaaggcggagcatgagagggagctcgctctgaggatggagctgattcgtcaggagaaa
ctggaacaactcgccagacgctttgaccgcaaagccgccatgagagagacctggctcagt
gagaaccagaggctggtgtcgcaggacaactttgggtttgacctccaggccgtggaggcg
gccaccaagaagcacgaggcgatagagacggacgtcaccgcgtacgaggagcgcgtccag
gctgtggtgtccgtggccaaggagctggaggtggagcactatcacgacatcaagcgcgtc
acggccaggaaggacaacgtgatccggctgtgggaatacctgctggagctgctgaaggcc
cgccgacagaggctggaaatgaacctgggcctgcagagagtcttccaggagatgctgtac
atcatggactggatggatgagatgaagatgttgctgctgtctcaagattatgggaagcat
ctattgggtgtggaggacctgctgcagaaacacgccctggtggaggccgacatcgccatc
caggctgacagggtgacggcagtcggcaccaacgccaccaagtactccgtcaatgacgac
ggctacaagccctgcgaccctcaggtcatccaggaccgggtctcccacctggagttctgc
taccaggagctgacccagcttgccgctgagcgccgcgcccacctggaggagtcccgccgt
ctctggaagttcttctgggagatggccgaagaggaaggctggatccgtgagaaggagcag
atcctgtcctctgtcgagcacggcaaggacctgacgggggtgctgcgcctcctcagccag
cagcgcgccctggaggatgagatgagcggccgcgccggccacctcaggcacaccattgaa
gagggccaggtcatggtgcagaccgaccacttcgccgccaccaagattcaggagcgtatc
gacgacctgcaggctcagtgggcggcgctggagcggctggcggcggtgagaaggaagagg
ctgcaggaggcgctggcgttgcatcagttccaggccgacgcggatgacgtcgacgcctgg
acgttggacgccctgcgaatcgtctccagtggagagacgggccatgatgaattctccacc
caggctctcttcaggaagcacaaggacgcggcggcggaggtgaccagctaccggccggtc
atcgactcgctccacgagcaggcagccttactgcctcaagaggaggcggagtcggaggag
gtgcgtggacgtctgtccggcatcgaggagcgtcacaaggaggtgacagaactgacgaag
ctgaggaagcaggcactgcaggatgctctggcactctacaagatgttcagcgaggccaac
gcctgtgaggtatggatcgacgagaaggagcagtggctgaacagcatggagatcccagag
aagctggaggaccttgaggtcgtacagcacaggtttgagagtctggagccggagatgaac
aaccaggcgtctcgtgttgctgtggtgaaccagatcgcccggcagctgatgcacaatggt
cacccgagtgaaaaggacatcaaaacccagcaggacaaactcaacaacaggtggagccag
ttccgagatctggtggaccagaagaaagagtccctgaactcggctctgggcgtgcaaaac
taccacctcgactgcaacgagacaaagtcctggatcaaagagaagaccaaagtcatcgag
tccaccgaggagttgggcaacgacctcacgggggtcatggccctgcagcgcaaactgacc
ggcatggagcgcgacttggccgccatcgaggacaaactgggcgacctgcgaggcgaggcc
cagcggctggcggaggagcaccccgaccaggcgaaggccatcacaggccgcatggccgag
atcacagctgtctgggaggaaatgaagaacactctgaagaaccgcgaggagtccctgggc
gaggccaggaagctgcagcagttcctgcgcgagctggacgactttcagacctggctggct
cgcactcaaacggccatcgcctccgaggacatgcccaacactctggccgaggccgagaag
cttatggcccagcacgaaggcatcaagaacgagatccagaactacgaagaggactaccag
aagatgcgggacatgggggagatggtgacgcagggccagacggacgcgcagcacatgttc
ctccggcaaaggctgcaggcgctcgacaccggctggaacgagctgcacaagatgtgggag
aaccgacagaacctgctgtcccagtctcacgcctaccagctgttcctcagggacaccaag
caggcagaggccttcctcaacaaccaggagtatgtcctggctcacaccgagatgcccgcc
acgctggagggagcagaggctgccatcaagaagcaggaggacttcatgaccaccatggac
gccaatgaagacaagctcaacggcgtggtggaggccggcaggcggctggccagcgacgga
aacatcaacgccgagcgcatccaggagagagtcgcctccgtcgacgacagacacaagagg
aaccgggaggctgcagtggagctgctgatgagactgaaggacaacagagacctgcagagg
ttcctgcaggactgccaggagctgtctttgtggatcaatgagaagatgctcacggctcag
gacatgacctacgacgaggccaggaacttgcacagcaagtggctgaagcaccaggccttc
atggccgagctgcagtccaacaaggagtggctggacaagatccagaaggacgggatgctg
ctggtgtcggagaagccggagaccgaggccgtggtgaaggagaagatggcggcgctgcac
accaagtgggaggagctagagtcgaccacgcagacgaaggctcagtgtctgtttgacgcc
aacaaggccgagctgttcacgcagagctgcgccgacctggacaagtggatggaaggcctg
gagggccagatccagtctgacgactacggcaaggacctgacctccgtcagcatcctgctg
aagaagcaacagatgctggagaagcaggtggaggtgcgccagaaggaggtggtggagctg
cagacccaggtgaaggctctggggcaggaggtgcaggacccggaggaggtggacgggcgg
aggcagctggtggaggacaagttccaggagttgctggagccgcttcgccggcgcaagaac
ttcctggtgcagtcgagagaagttcaccagttccaccgagacgtggaggacgagatcctg
tgggtccaggagaggatggccgtcgccacgtcctccgaccacggacacaacctgcagacg
gtccagctgctcatcaagaagaaccagaccctgcagaaggaggtgcagggccaccagcct
cgtatcgatgacatcctgcagcgcagccagagcctcctgaaggacgaggtgcggcagcgt
ctggacgacctgcagcagctgtggaggcggctcacggaggaggcggagcttcggcacggc
cggctggaggaggcgcacaaagcccagcagtactacttcgacgccgccgaggccgaggcc
tggatgagcgagcaggagctgtacatgatgtcagaggagaaggccaaggacgagctcagc
gctgtcaccatgcagaagaagcaccagatcgtggagcaggcggtggaggactacgccgag
accgtccaccagctgtccaagaccagcagaggactggtggcagacgggcaccccgagagt
gagcgaatcagcatgcgtcaatctcaggtggataagctgtacgccggcatgaaggaccta
tcagaggagaggcggggcaaactggacgagaggctccgcctcttccagctgaaccgcgag
gtggacgagctggagcagtgggtcgccgagcgggaggtggtggccgggtcgcacgagctg
ggccaggactacgagcatgtgacgatgctgcaggagcgtttccgcgagttctctcgggac
accgggcacatcggtcaggagcgcgtggacgcggtgaaccggctggcggacgggctgata
aacaccggccacggcgacgcggccacggtggcggagtggaaggacgggctgaacgaggcc
tgggccgacctgctggagctggtggacacccggacgcagatcctcgccgcctccttcgag
ctgcaccggttctaccacgacggcaaggaggtgctgggacgcatcctggacaagcagaaa
aagctgccggaggaggcgggccgcgaccagaacacggtggagacgctgcagaggatgcac
agcgccttccagcacgacgtccaggccctgggggcgcaggtgaggcagctgcaggaggac
gcggtgcgcctccagtcggcgtacgcgggagacaaagccgacgacatccagcggcgggag
agcgaggtgctggaggcctggaggggtctgctggaggcctgcgacggccgccgggtccgc
ctgctggacaccggggacaagttccggttcttcagcaccgtgcgcgacctcacgctgtgg
atggacgacgtaatccggctcatcgaggcccaggagaatcccagagacgtgtcgtctgtg
gagctgctgatgaacaaccaccagggcatcaaggccgagatcgacgcccgcaacgacagt
ttcagcgcctgcatcgagctgggaaagagcctgctggccaggaagcactacgcgtcagag
gagatcaaagagaagctgctgcaactgactgacaagaggaaagagatgattgacaagtgg
gaggaccgatgggagtggctacgactcatcctggaggtgcaccagttctcccgtgatgcg
ggcgtggcggaggcgtggcttctgggtcaggagtcgtacctgtgcagcaggcaggtgggt
cagagcgtgtcggaggtggagaagctcatcaagcggcacgaggccttcgagaagtccgcc
gccacctgggaggagcgcttctccgccctggagcggctgaccacgctggagctgctggag
gtgaggagacagcaggaggaagaggagaggatgaggaggcccccgactccagagctcctg
atccagcaggaggaggaagctcagccacagagtggcctccctcagaccggaccccctcag
accggaccccctcagaccggaccccttcagaccggacccccctgggaccaggactctcct
cgggacggagagctggtgaacggcgttggcgagcgaagctccaaggagccgagtcccggg
tcgtccccggcctccggcaggaagaggaccagccagtcctccactctgccccccagggac
caggactcacagctgcccccaagggaccaggactcacagctggaggggctcctgcaccgc
aaacacgagtgggagggccccaacaagaaggcctctaacaggtcgtggcacaacgtgtac
tgcgtcctcaaccaccaggagatgtgtttctacaaagacagcaaggcggcggcccagaga
gtgcactaccacaaccaggtccctgtggacctgaaggccgccgcctgcaacgtggccacg
gactacaagaagaagaagcacgtcttcaagctccgagtcccggatggaaacgagtttctg
tttcaagccaaagatgaagaggacatgagcacctggatccaggccatcctggacgccggc
agcagccccggcacgccggcgtccggccgcgctcagacgctgccggccgccgtcacgccg
gccaccgagtcgagtcccggcaagagagagaaggacaaagagaaggacaaagagaaacgc
ttcagtctgttcagcaagaagaaacagtag
DBGET
integrated database retrieval system
