Clinocottus analis (woolly sculpin): 137802196
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Entry
137802196 CDS
T10471
Name
(RefSeq) LOW QUALITY PROTEIN: neuronal PAS domain-containing protein 3
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cana Clinocottus analis (woolly sculpin)
Brite
Transcription factors [BR:
cana03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
137802196
BRITE hierarchy
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Ortholog
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Other DBs
NCBI-GeneID:
137802196
NCBI-ProteinID:
XP_068455955
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Position
Unknown
AA seq
1116 aa
AA seq
DB search
MIRIFPDFSVQVTASGPGGPGGLGGGGGGGGGGGMMTGPPVGRVPGPVPGATNGSAQSVQ
GISAYQQSDPYWERPANAGSCSAARPKETLHLAGQQQHTSSPWLQALRKEKSRDAARSRR
GKENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPN
TSVKAIGSQRRRSPSAVASEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGL
SQVELTGSSVFDYIHPGDHVELAEQLGMKLPPGRGLSLSQGAVNEDGASSGSSSSHSETP
EPVESSSPSILAPDNLLERNFFIRMKSTLTKRGVHIKSSGFKVIHVTGRLRIRMTLTHSR
SVPLQIIGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKFIYCENRISDYMDLTPADIV
GKRVYHFIHAEDVEGIRECHLDLINKGQCVTKYYRWFQKNSGYIWIQSSATLAINAKNAN
EKNVIWVNYVLSNHELKDTPMDIAQLPNLPGKTSESSETSDSESESKENSDNEKSEGKPS
HQSEREDPETDSKRQQQPGQPHCSSEQEMKRQEEGDSSSNPESQESDDSLEASDGEGEEP
EEVRGGGGGGGGGGDGGGGRLGRLAGLGGLGALGLSNLGGLHIKVEHYGEGEEVHLHNSQ
TSSSEEEEEEDDEEEEEEEEEEEDEGAQDCDSADAKLLKRRKRRKVQKWDGSRSKRLRLS
SPTEHSPAAAAAMGDAATTLGDPSRATPTNSSSSSRLLGSAGSPNCVGSAAPSSSSVLKI
KTEMSEPINFDNDSSIWNFPPNREISRNESPYSMTSKPPPPPLPPAAPGSHENFPSPQGG
GGLQVGIPDSVLTPPGTDGGGGGARKPPYNGSSAPSSASSAGGLAAPSGGSSADPLSPPL
SASPRDKQQGTPTTASTSSSSSSSSSSSSTSSSSLLYSGELEALQRLQAGNVVLPLVHRV
AGTLASSTAAATTAPPRVYTTGTIRYAPADVTLAMAQGNLLPNAAMNFVDGSGFGLDPKT
PMEMLYHHVHRLNMSAAAAAAGGGGGGGGGGGGGGGGSPFIGSPATMGGNGGLVGGQMPT
AANVFTTAEGLFSTLPFPVYGNGIHATQSSLERKED
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagcgtccaggtgacggcttcgggacccggaggaccc
ggaggacttggagggggaggaggaggaggaggaggcggcgggatgatgacgggacccccg
gtgggtcgcgtgcccgggccggtccccggagccaccaacgggtccgcgcagagcgtgcag
gggatcagcgcgtaccagcagagtgacccctactgggagcggccggctaatgcaggcagc
tgctccgccgcccggcccaaggagacgcttcacctggccggccagcagcagcatacctcc
tcaccatggctgcaggctctgaggaaggagaagtcgcgggacgcggcgcggtcgcggcgg
ggcaaggagaactttgagttctacgagctggccaagatgctgccgctgccgggcgccatc
accagccagctggacaaggcctccatcatccggctcaccatcagctacctgaagatgagg
gacttcgccaaccagggggacccgccctggaacctgcgcatggagggcccgccccccaac
acgtccgtcaaagctatcggttcccagagaaggaggagtcccagcgccgttgcctcggag
atcttcgagcctcacctgggcagccacattttacagtctctggacggttttgtatttgca
ctaaacaaggagggacgcttcctctacatctctgagaccgtctccatctacctgggactg
tcacaggtggagctgaccggcagcagcgtcttcgactacatccaccccggcgaccacgtg
gagctggcggagcagctgggcatgaagcttcctccgggccgaggcttgtctctgtcgcag
ggcgccgtcaatgaggacggagcgtcctcgggttcctcgtcgtcgcactccgagaccccc
gaaccagtggagtccagcagtcccagcatcctggctcctgacaacctgctggagcgaaac
ttcttcatcaggatgaagtcgacgctcacgaagagaggagtgcacatcaagtcctcagga
ttcaaggtgatccacgtcacgggccgcctgcgcatccgcatgactctgacgcacagccgc
tcggtgccgctgcagatcatcggcatggtggtggtggctcacgcgctgccgccgccgacc
atcaacgaggtgcgcatcgactgccagatgttcgtcacgcgagtcaacatggacctgaag
ttcatctactgcgagaaccggatcagcgactacatggacctgacgccggccgacatcgtg
ggcaagagggtgtaccacttcatccacgctgaggacgtggagggcatccgagagtgtcac
ctggacttgataaacaagggtcagtgtgtgacaaagtactaccggtggttccagaagaac
agcgggtacatctggatccagtccagcgcgacgctcgccatcaacgccaagaacgccaac
gagaagaacgtcatctgggtcaactacgtcctgagtaatcacgagctcaaagacacgccc
atggacatcgcccagctgcccaacctgccggggaaaacctcggagtcctccgaaacctcc
gactccgagtccgagtccaaagaaaactccgacaacgagaagtccgaggggaagccgagc
caccaatcagagcgcgaggacccggagacggacagcaagcggcagcagcaacccggccaa
ccgcattgctcctccgaacaggaaatgaagcgccaggaggaaggagacagctcgagtaac
cccgagagccaggagagcgacgacagtctggaagcctcggacggagagggggaggaaccg
gaggaggtcagaggaggaggtggaggaggaggaggaggaggagatggaggaggaggaagg
cttgggaggttagcaggactcggagggttaggcgcactgggactgagcaatctgggcggg
cttcatattaaggtggagcactacggggagggagaagaagtccatctgcacaactcacag
acttcttcatcggaggaggaagaggaggaggacgacgaagaggaggaggaggaggaggag
gaggaagaggacgaaggcgcgcaagactgcgacagcgccgacgccaaactcctgaagagg
cggaagaggaggaaagtgcagaagtgggacggatcccgtagcaagaggctccgcctctcc
tcgcccaccgagcacagccccgccgccgccgccgccatgggagacgccgccacgacgctg
ggcgacccctcgcgggccacgcccaccaactcctcctcctcctcccgcctcctcggctcc
gccggctccccgaactgcgtcgggtcggcggcgccgtcgtcgtcctcggtcctgaagatc
aagacggagatgtcggagccgatcaacttcgacaacgacagcagcatctggaacttcccg
cccaacagggagatctccaggaacgagtccccgtacagcatgacctccaagccgccgccg
ccgccgctgccgccggccgccccggggagccacgagaacttcccgtccccgcagggaggc
ggcggtctgcaggtcggcatccccgactccgtcctcacgcctccaggaaccgatggcggc
ggcggcggagcgaggaagcctccttacaacggaagctccgccccgtcttcggcgtccagc
gccggcggtttggcggccccctccggcggctcctcggcggaccccctgtcgcctccgctc
tccgcctcgccgcgggacaagcagcaaggcacccccaccaccgcctccacctcttcctcg
tcctcctcctcgtcctcctcctcgtcaacctcgtcctcgtcgctgctgtactccggcgag
ctcgaggcgctgcagcgcctgcaggccggcaacgtggtgctcccgctggtccaccgggtc
gcggggaccctggcctcctccaccgccgccgccacgacggcgcccccgcgggtctacacc
accggcaccatcaggtacgcgccggcggacgtcaccctcgccatggcgcagggcaacctc
ctccccaacgccgccatgaacttcgtcgacggctcgggcttcggcctggaccccaagacg
cccatggagatgctgtaccaccacgtgcaccggctcaacatgtcggcggccgcggcggcg
gcgggcggcgggggtggcggcggcgggggaggcggaggcggcggcggcggaagcccgttc
atcggatccccggcgaccatgggaggcaacgggggcctcgtcgggggccagatgccgacg
gcggccaacgtcttcaccacggcggagggactcttctccacgctgccgttccccgtgtac
ggcaacgggatccacgccacgcagagcagtctggagaggaaggaggactaa
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