Clinocottus analis (woolly sculpin): 137802211
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Entry
137802211 CDS
T10471
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137802211 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cana03036
]
137802211 (nfrkb)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
137802211 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
137802211
NCBI-ProteinID:
XP_068455998
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MDALAHMLSDPLEPKEEHDEQITEECMLGNCRLNLPEDLLEDPDIFFSVMSASTWSEVLS
DSQRQHLRQFLPQFPDNNVAEQDSTISDIFNNRNFNFGNPLHLAQKQFRDGYFNPEVVKY
RQLCGKSQKKRQLYSLQQYYHKLLKHILVSRKELLEFAVHSGLDIPPKRKLTTKTHAEMR
EPRVRRRLSRIIKEVKTECGDSNASSDDDDISLWAPAPQSPSSPTPTVSLRVLPSLSTQD
MKTTEGIELGEQDLKAMLHNHREKRKRQPDHPDLMTSDIHLGDILSRANVGRKGAVAFFD
LSLPKKKIKDEKRKKKMRTIKVESEDPCEILAPSDTPSAPTASIINSLPDTPSTPLANIK
EEIVEECQSSPVPVEEIAISFFSLLESILKAETFTGTSLLEEKVQMWQSSPASSLNVWFS
SVPCWSDLVLQALQFLAGETKDGMMALPSGFSPFVEFADEAQQWRWIGPTQDTEKDLSAL
CQLWLDSKDLVIKTENEDMLDMTSPTPRVSTDYVVRPSTGDERQVFQIQEQQRYNQPHKA
FTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGEG
TRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRSRS
QEEFEKIHQAQAAAAKARKALQQKPKPASKPKSGSKDGGSKTPGCLEAGQDTVSNPMSPT
PTTPTQNTPGTPKSPLSCTVTTPTKTGVPDTIKTSTGVLLVSPPSLPQLGTILPTSQVCP
PVSQPVTSQHTARIVSHLAAGSLPQVRVVSTQPGLGSSVGSHQATLVHQSPHQIRMPVSM
AAKSISQAMVSVPMRSQSVGSPVQVPTTISVSAVAVAKPQARSPGSPAHNLASPARLQGV
AGSSIKQVSITGQLGMKTAGGGGIPITATNLRIQGKDVLRLPPSSITTDSKGQTVLRITP
DMMATLAKSPVATVKLTPDFLGTAGSKSISATLRVTPPRSSPSSASSCTGEVQTTKSGSV
ASSLMKAAGDTAIRLMPTLAVTMADQKSRTFSTVSSPDKSGTTIRIMPGLGVIPQKQGQT
ITMTTTTGSKPLTASTGANVMTMAASVVASAKGITVAPGVSCSTLTLGTTTATVRQVPAT
VVTTQTGKLPARITVPLSVLNQPLKSKSVVTTPMVKGSLNTNISNLGRNIILTTMPAGTK
LIAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVQAQQLQQHMSSGSQKSVSTVVVTTAPS
AKCAPDPPTAPQQ
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggacgccctagcccacatgctgtcagaccctcttgaaccaaaagaagaacacgatgaa
cagatcacagaggaatgcatgctggggaactgtcggttaaaccttccagaagacctactt
gaagacccagacattttcttctctgtgatgagcgcgagcacctggagtgaagtgctgtcg
gattcccagaggcagcaccttcgtcagtttttgccacagtttcctgacaacaatgttgca
gagcaggacagcaccatcagtgacattttcaacaacagaaactttaactttggaaatccc
cttcatcttgcacaaaaacaattcagagatggttacttcaatcctgaggtagtcaagtac
agacaattgtgtggcaagtcccagaagaagagacagctgtactccctccagcagtattac
cacaaacttttgaagcacatccttgtctccagaaaggagttgctggagtttgcagttcac
agtggtctggacattcctccaaaaagaaagttaacgaccaagactcatgctgaaatgcgg
gagccaagagtgagaagaagattgagccgcataataaaggaggttaaaacggagtgtgga
gacagcaacgcttcatctgatgatgacgacatatcattatgggctccagcaccccaatca
ccttcctctccaacacccactgtctcgctcagagttcttcctagcctctccacccaagac
atgaagaccactgagggaatagaactcggggagcaggatttgaaagccatgctgcataac
catcgtgagaagaggaagcgacagccagatcatccagacttaatgacatctgacatccat
cttggagatatactttcaagagcgaatgttggtcggaagggggctgtggccttttttgac
ctgtctctgcctaagaagaagatcaaagatgagaaaaggaagaaaaaaatgaggacaatt
aaagtagaatcggaggatccctgtgaaattcttgcaccttcagacaccccatcagctcca
acggcgagcatcatcaattccctgccagacaccccgtctactccactggccaacatcaag
gaagaaattgtggaggagtgtcagagcagcccggttccagttgaggaaatagctatcagt
ttcttcagcttgttggagagcatcttaaaggcggaaacctttacaggcacttcattgttg
gaggagaaagttcaaatgtggcagtcctctccagccagctccctcaatgtgtggttttca
tctgtcccatgttggtctgacttggttcttcaagctctgcagtttcttgctggagagact
aaagatggaatgatggcactccccagtggattttctccatttgtggaatttgctgatgaa
gctcagcagtggaggtggattggtcccactcaggatacagaaaaggatctcagtgcactc
tgtcagctgtggctggactccaaagacttagttatcaagaccgaaaatgaggacatgcta
gatatgacttctcccacaccaagagtctcaactgattacgtggtgcggcccagcactgga
gatgagagacaagtgtttcaaattcaggagcagcagcgatacaaccagccacacaaagcc
ttcaccttcaggatgcacggctttgaatctgtggtggggcctgtgaaaggggtgtttgat
aaggagatgtctctcaacaaagccagggagcacacattgcttcgctcagatcgaccacca
tatgttaccattctctctctggtgcgcgatgcagcagccaggttaccaaatggagaagga
acaagggcagagatctgtgaactgttgaaagactctcagtttcttgctccagacgtcacc
agtgcacaggtgaacacagttgtcagtggtgccctggatagacttcactatgagaaagac
ccctgtgtgaagtatgacatcggccgcaagctttggatctacctgcaccgcagccgcagt
caagaggagtttgagaagatccaccaggctcaagctgctgctgcaaaagcaagaaaagcc
ctgcagcaaaaacctaaacctgcatctaagcctaagtccggaagtaaagacggaggcagt
aaaacccctggatgtctggaggcaggacaggatacagtctcaaatcccatgtcaccaacc
cctacaacacccacccaaaacacacccggaacccctaagtcccccttatcctgcacggtc
accacaccaacaaagactggggtccctgatacaatcaaaaccagcacaggtgttcttctt
gtgtctcctccctcattgccccagctgggaaccatcttacccaccagtcaggtttgccca
ccggtttcacagccagtaacatcccaacacacggctcgcatagtgagtcacctggcggca
ggctccctccctcaggtacgggttgtttctactcagcctggtctgggttcttcggtagga
agtcatcaggccacactggtacatcagagccctcaccagatcaggatgccagtgtcaatg
gcagccaagagcatttcacaggcaatggtttctgtgcctatgaggagtcagtctgtcggt
agtccagtccaggtaccaaccaccatatcagtgtccgctgtagctgtggccaaacctcaa
gccagatcacctggtagcccggctcacaacctggcttcccctgcaaggctgcaaggagtc
gccggctcaagtatcaaacaggtgtccatcacaggccagttgggaatgaagactgctggt
ggaggaggaattccaataacggctactaacctgcgcatacagggtaaagatgtccttcgt
cttccaccgtcctccatcaccacagactccaaaggacagacggtgctgcggatcactcca
gacatgatggctactcttgccaagtccccagttgcaaccgtcaaactcacgcctgacttt
ctgggtaccgccggcagcaagagcatatcagccactctccgtgtgacaccaccccgctct
tcaccttccagtgcttcatcctgcacgggggaggtacagaccactaaatcaggctctgtt
gcttctagcttgatgaaggctgcaggagacacagccatacgactgatgcccacattggca
gtgactatggctgaccaaaaatccaggaccttctccactgtatcctcccctgacaagagt
ggtaccaccattcggataatgccaggactcggtgttattccacagaaacaaggtcagacc
atcacaatgacgaccaccactggcagtaaaccgctcacagcatctacaggtgctaatgta
atgaccatggctgccagtgttgtggctagtgccaaggggattacagtggctcctggggtc
tcgtgctccactctgacgctcggaacaactacagctactgtgcggcaggttcctgctaca
gtcgtcactactcaaacgggtaagttacctgcaaggataactgtgcccctctcggtcctg
aaccaaccactgaagagcaagagtgttgtgacgacaccgatggtgaaaggaagtctcaac
acaaatatcagcaatctgggcaggaacatcatcctgaccaccatgcctgctggcacgaag
ctgatcgcagggaacaaaccagtcagctttgtcacagcacagcagttccagcagcttcag
cagcaaggacaggccacgcaggttcgcatccagacggtccaggcacagcagctccagcag
cacatgtcatcaggctcccagaaatctgtttcaacagtcgtagtcacaacagcaccttcg
gccaaatgtgcccccgatcccccgactgcacctcaacagtga
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integrated database retrieval system
