Clinocottus analis (woolly sculpin): 137802224
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Entry
137802224 CDS
T10471
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cana03021
]
137802224 (supt6h)
03036 Chromosome and associated proteins [BR:
cana03036
]
137802224 (supt6h)
Transcription machinery [BR:
cana03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
137802224 (supt6h)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
137802224 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
S1
Spt6_S1
HHH_3
HHH_9
S1_RRP5
Tex_N
SH2
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
137802224
NCBI-ProteinID:
XP_068456027
LinkDB
All DBs
Position
Unknown
AA seq
1773 aa
AA seq
DB search
MCGTAVMSDFIESEAEESEEEFDEKDLKPKKTQRFLEEDDEEEEENTEDQDERGNLRGLI
DDGDEDGEEEEERPRNPSASASDSEEEVKHRRKKRVYDDCLDEDDLDLIEENLGVKVKRR
KKKYDRVKMLDDDDEDDEDQKDQIADEIFHGDAEGELEEGEAVDEPLHHADDDEEGEDEE
SDIDDFIVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEE
DQDEEGWDRPKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPV
KPAEDDELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFM
RNQQFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFRKMQSYQYE
QISADPDKPLADGVRPLDTGDIERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNTAKTSK
KKLKKIKEVTEDGEEEELEVEEEEEDQKGPDLKLASRRDMYSICQSVGLDGLTKKFGLTP
EQFGENLRDSYQRHETEQFPAEPVELARDYVCSQFSSPEAVLEGTRYMVAMQIAREPLVR
HVLRQTFQERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKAVKELNGDQFLKMCLAEEEG
LLSIDICIDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALTQFLYP
QMAKELKSKLITEAKESIVRACCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLG
VAYAPSRDTPVFCALINGEGEVVDFLRLPYFMKRRNAFKEDDREKKAFDIETLKKFLSSK
KPHVVAVAGENRDAQMIMEDIKRAVSELEQESSLPAVGVELVDNELATLYMNSKRSEIDF
RDYPPLLRQAVSIARKIQDPLMEYAQVCSSDDDILCLKLHPLQEQVVKEDLLCALYCEFI
NRVNEVGVDVNKAIAHPHTQSLVQYVCGLGIRKGSQLLKILKQNNTRLENRTQLVTMCHM
GPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDA
NPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVPYRV
PNTEEVFNLLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQ
DNFPELSEVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTV
HVRIMKIDIEKFSVDLTCRTSDLMDKANEWKLPKDTYYDFDTESEDQKIEEELKKKQQRT
PYIKRVIAHPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVAEGIYQHVDV
REEGKENAFSLGHTLWINTEEFEDLDEITARYIQPMASFARDLLGHKYFQDGLWGKKEKM
EELLVKTKREKPTFIPYFLSACKDMPGKFILGYQPRGKPRVEYVTITPDGFRYRSQIFPT
VNGLFRWFKDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQM
FNAIAAVTGQGQNPNTTPAQWGSSQYGYGGSTGGGGGGGGGSSSAYHVFATPQQPIATPL
MTPSYSYTTPSQQALGTPQYTSTTPQSSHSHTHGPPHGSHVSHHSHHGHSSHSHSSGTPT
SSTSSRGRTPQQQQQQQQQQQQQQQPPPPKASGSSASAVDWGKMAEQWLKEKEAEGRKKT
QRMTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5322 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggaacagcagtcatgtcagactttattgagagcgaggctgaagagtcagaggag
gagtttgatgagaaagacctaaagcccaaaaagacacagaggtttttggaggaagatgat
gaagaggaagaagagaacacagaggaccaggatgagcgaggaaatttacgtggactcatt
gatgatggagacgaggatggggaggaggaagaggaacgtccaagaaatccaagtgcatca
gcgagtgactcagaagaagaagtcaagcatcggcgtaaaaagcgcgtttatgacgactgc
ctcgatgaagatgacctggacctaattgaggaaaacttaggtgtaaaagtgaaaaggagg
aaaaagaaatatgaccgtgtaaaaatgcttgatgatgatgatgaagatgatgaggaccag
aaggaccagatcgcagatgaaatatttcatggtgatgcagagggagagttggaggaaggc
gaggctgttgatgagcctctccaccacgcagatgacgatgaagaaggagaggacgaggaa
tcggatatagacgattttattgttgatgatgatggccaacccatcaccaaaaagaggggc
aagaaattctcaggatacacagatgcagccctccaggaggcccaagaaatatttggtgga
gactttgactttgctgacttcgacgcagatgcatacgaccagggggaggaggaggaagag
gaccaggatgaagaggggtgggaccgccccaagaagcagacaaagaggaggcaggggagg
aagagcatttttgagatctacgagcccagtgagctggaaagtagtcacatgactgaccaa
gacaatgagatccgctctacagatatgcccgaaaggttccagttacgatccatccctgtt
aaaccagctgaagatgatgagctggaagaagaagcggagtggatcttcagacatggcttc
tccactcttactatctccatgcaggagagcacagattatctagaccgggggacgaccaca
aacttcagcaggaaaggtcccagcacaattgctaagatcaaagaggccctcaacttcatg
aggaatcagcaatttgaggtcccatttatagctttctacaggaaagaatatgtggagcct
gagctaaacatcaatgacctttggaaagtgtggcagtgggatgaaaagtggactcaactg
aagacacggaagcagaacctgacccgtctctttaggaaaatgcagtcctaccagtatgag
caaatctcagccgaccctgacaaacctttggctgacggcgtccgtcctctggacaccggt
gacattgagaggctaaaagatgtgcagactcttgaagagctgggtgatgtgtacaaccac
tttctgctctactacggccgagacatccccaagatgcagaatactgccaaaaccagtaag
aagaagctcaagaagatcaaagaagtgacagaggacggtgaagaagaggaattggaggta
gaagaagaagaagaagaccagaaaggacctgacctcaagctggcgtctcgtagagatatg
tacagcatctgtcagagcgtgggacttgatggcttgactaaaaagtttgggttaactcca
gagcagtttggagaaaatttgagagacagttaccagcgtcacgagacagagcagttccca
gctgagcctgttgagctggccagagattatgtttgcagtcagttcagctctcctgaggca
gtgctggaaggaaccaggtacatggtggccatgcagattgctcgtgaaccgttggtcaga
catgttctccgacagacctttcaggagagggccaagatcaacatcaagcctacaaagaag
ggcaaaaaggaggtagacgaggctcattttgcctactccttcaagtatcttaagaacaag
gctgtaaaagagctgaatggagatcagttcttgaagatgtgcctggcagaggaggagggg
ctgctttccattgacatctgtatagaccttataggggtcaaagggtatgctggggatcag
acatactttgatgagatcaaacagttctactacagggatgagttcagtcaccaagtgcag
gagtggaacaggcagcgaactttagccatagagagagctctcactcagttcctctaccct
cagatggccaaggagctcaagagcaaactgatcactgaggccaaagagagcattgtcagg
gcctgctgtcgtcggttatataactggctcaaggtggctccttaccgaccagatcagcag
gttgaggaagatgacgatctgatggatgagagtcagggcaaaggcattcgggttctgggt
gtagcctatgcccccagcagagatacaccggttttctgtgctctgatcaatggggaaggg
gaggtggtcgacttcttgcgtctgccctacttcatgaagaggaggaatgcctttaaggag
gatgacagagagaagaaggccttcgacatcgaaactctcaagaagtttttgtccagcaag
aaacctcatgtggtcgctgtcgctggggaaaatcgagatgctcaaatgatcatggaggac
atcaagagggctgtcagcgagcttgagcaagagtcctctctacctgctgttggtgtggaa
cttgttgacaatgagttggcaacactgtacatgaacagcaagagatctgagattgatttt
agggattaccctcccttactgcgacaggctgtgtcgatagccaggaagatccaggatccc
ctgatggagtatgctcaggtgtgcagctctgatgatgacattctctgcctcaaactacac
ccactgcaggaacaagtggtgaaggaagatttgctctgtgctctttactgtgaattcatc
aaccgtgttaatgaggttggagtggacgtgaacaaggccattgcccatcctcacactcaa
agtctagtccagtatgtctgtggtctgggaataagaaagggctctcaactgctcaagatt
ctaaagcaaaacaacactcgacttgaaaacagaactcagctcgtcacaatgtgtcacatg
ggccccaaagtttttatcaactgtgccggttttatcaagatcgacactgcatcgcttggg
gacagcaccgactcatacattgaggttctggatggatctcgtgtccaccctgagacatac
gagtgggctcgcaagatggctgtggacgccctcgagtatgatgagtctgcagaggatgcc
aacccagctggagctctggaggagatcttagaaaatccagaacgtctcaaagatctggac
ctggatgcctttgctgaagagcttgagagacagggttacggcaacaaggggattactctg
tatgatatccgtgcagagctgagctgcagatataaagacctgagagttccctacagagtc
cccaacactgaggaggtcttcaacctgctcacaaaggagactccagagaccttttatatt
ggtaagctgatcaccagtatagtaactggtattgctcaccggcggcctcagggagagagc
tatgaccaggccatccgtaatgattctacaggcctgtggcagtgtcccttctgccagcag
gacaacttccctgaactcagcgaggtgtggaatcactttgacagcggttcatgtccaggt
caggccattggggtgcggtccagattagataatggcgtccagggattcattcccaccaag
tttcttagtgacaaagtggtcaaacaccctgaggagagggtcaaggtgggcatgacagtt
cacgttcgcatcatgaaaatcgacattgaaaaattcagcgtcgatctcacatgccgcacc
tcagatttgatggacaaggccaatgagtggaagctccccaaagacacttactatgacttt
gacacagagtccgaagaccaaaaaattgaggaggagctcaaaaagaaacaacagcgaaca
ccatacataaagcgtgtgattgcccacccgaacttccacaatattagtttcaaccaagca
gagaagatgatggagaccctggaccagggagacctgatcatcagacccagcagcaaggga
gagaaccaccttactgtcacctggaaagtggctgaaggcatctaccaacatgtggatgtc
agggaagaaggcaaagagaacgcattcagcttagggcacactctctggatcaatactgaa
gagtttgaggatctggatgaaatcactgctcggtatattcagccaatggcatcatttgcc
agggatctactggggcataagtacttccaggacggcctttgggggaaaaaggagaaaatg
gaggagttattggtcaagacaaaaagggagaagcctacttttatcccttactttctttcg
gcgtgtaaagatatgccaggaaaattcatactgggctaccagcctcgcggaaaaccacgg
gttgagtatgtgaccatcaccccggatggcttccgctatcggtcacagatatttccgaca
gtgaatggactattccgttggtttaaggaccattaccaagagcctgtgccaggcatcact
ccaagcaacagtagccgaacgaggactcctgcgtccctgaacgccaccccggccaatatc
aacattgcagatttgacgcgagcggtcaacgccctcccgcgcaacatgacctctcagatg
ttcaatgccatcgccgcagtcaccggccagggccagaaccccaacaccacccccgctcag
tggggctccagccagtacggctacggtggcagcacaggaggaggagggggaggaggagga
gggagctcctctgcttatcatgtatttgccacacctcagcagcctattgcgacaccgttg
atgacgccaagctactcttacaccacgccaagccagcaggctctgggtacgccgcagtac
accagcactaccccgcagtcctcacactctcacacacacggccctccacacggaagccat
gtgtcccaccacagccatcacggccacagcagtcacagccactcatccggcactccgaca
tcctctacctcatccagaggaaggacgccgcagcagcagcaacagcagcagcagcagcag
caacagcagcagcaaccgccaccgccaaaggccagtggcagcagcgcctccgcagtggac
tggggcaagatggcggagcagtggctgaaggaaaaagaagcagaggggcgtaagaagacc
cagaggatgacgccacgaccgtcgcccagcccaatgatagagagcacacctatgtccatc
gccggagacgccacaccgctactggatgagatggaccgatag
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