Clinocottus analis (woolly sculpin): 137802250
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Entry
137802250 CDS
T10471
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04510
Focal adhesion
cana04512
ECM-receptor interaction
cana04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
cana04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
137802250
Glycosaminoglycan binding proteins [BR:
cana00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137802250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
137802250
NCBI-ProteinID:
XP_068456104
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MAQEVDQESLVFLVWMVSMGRRDHKDQKDLKENLFMVLRFQGFRGILVEMDSAGYLEDKE
SLGLKASRALLAFMGFRDWKDSKGEQGPPGPQGPEEVIEFPPDFLPPKGNKGEMGPPGQC
GPKGTKGPPGPTGYPGPPGFPGAQGLKGDPGLKGYEGPRGPHEYLVPKVTLVLLEQKGFQ
GLQAPQVLAFQALRGNLDLKVIRDFLAPQEFLDDQALQVKLRNAVLKRLDHPVQKERIPG
VPGRDGPPGAVGLLGPKGLKGDDRETGGIGLPGFNGDPGDPGPSGISLDGSSGLPGFPGL
PGRVLLAHPASLGLRGQGDAVEFLETKGFKVHKANLDDLVGKESQETMALQDLQETLDRG
EYQLDQEVPLVPQEILGPMAGQDRKVRAGTQVGPGPKVYLAALDLQDPEVNKEKEASMGV
QVTLDTQDSLVIKVSQDGLMENLVHLDPKDCRGRMDPVHPEEVQEIQGTLDCGEGQVCLD
NEAWSVIQEDKEEQVMSSRPGVPGFPGDSGGLGPPGPPGSYGPPGIPGPPGPYGFPGVKG
LQGQQGPPGAIFSGSKGQSGPPGATGLPGFPGEPGNPGKECSNPIPGPNGEIGYEGPPGP
PGPPGEPGPTGSSIYTQGDQGPIGLPGLPGRKGDGGLPGPPGPQSYPGFTGPKGATGPAG
SRGSQGPKGQIGVPGPWGRKGVTGPVGETGQKGPIGFVGLPGKPGPAGRTGPVGDPGDAG
QLGFAGPQGIPGPPGDPGSRGQGEASPSGFLLTIHSQSVQVPQCPEGSSRLWAGYSLVYL
EGQEKAHSQDLGQAGSCLPVFSTMPFSYCNKGACHYSSRNDKSYWLSTTAPIPMMPLSGL
EISSHISRCAVCETVSPAAAFHSQDHAVPACPAGWRSLWTGYSFLMHTGAGDEGGGQSLT
SSGSCLKDFRAHPFIECQGARGSCHYFANLYSFWLTAVIQTDQFTTQRPDTIKADDQQWR
KASQCHVCLREQ
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagaggtcgaccaggagtctttggtattcctggtctggatggtctccatgggc
cgccgggatcacaaggaccaaaaggatttaaaggagaacctttttatggtgcttcgcttc
cagggcttcagggggatcctggtagagatggacagcgcggggtacctggaagacaaggag
tcgttgggcctaaaggccagtcgggccctcctggccttcatgggattcagggattggaag
gactcaaagggggagcaggggccacctggcccacaaggaccagaagaagtcatagaattt
cctccagacttccttccccccaaaggcaacaagggagagatgggtcctcctggacaatgt
ggaccaaagggcacaaaaggcccccctggtccaactggttatccaggaccgccaggattc
cctggagctcaaggacttaaaggagacccagggctgaaaggatacgaggggccaagaggt
ccacatgagtacctggtcccaaaggttaccctggtgttgctggagcaaaagggtttccag
ggcttacaggccccccaggtcctggcgttccaggctctcaggggcaacctggacctaaag
gttatcagggacttcctggcccctcaggaattcctggacgaccaggccctccaggtgaaa
ctgaggaatgctgtcttgaagagattggatcacccggtccaaaaggagaggattccaggt
gtgccgggaagggatggtcctccaggtgctgtgggactgcttggtccaaaaggcctgaaa
ggagatgacagggaaactggtgggattggactgccaggtttcaatggagatccgggcgac
cctggtccgagtggaattagcctggatggctcttcaggacttcctgggttcccaggactt
ccaggccgggtgctcctggcccacccggcttccttggggctcaggggccaaggggacgcc
gtggaattcctggaaaccaagggtttcaaggtgcacaaggccaacctggacgacctggtt
ggaaaggagagccaggagacaatggccttgcaggacctccaggaaaccctggacagaggg
gagtaccagctggaccaagaggtcccgctggtccctcaggagatcttgggaccgatggct
ggtcaggacagaaaggtgagagcgggtacccaggtagggccggggccaaaggtttacctg
gccgccctggacctgcaggacccagaggtaaacaaggagaaagaggcttcgatgggcgtc
caggtgacgctggatacccaggacagcctggtaataaaggtgagccaggacggtcttatg
gagaacctggtccacctggacccaaaggattgccggggaaggatggacccagtgcaccca
gaggaagtccaggagatccaggggaccctggactgcggggaaggtcaggtctgcctggac
aacgaggcgtggtcggtgatccaggaagacaaggaggaacaggtgatgtccagtcgtcca
ggtgttccaggttttccaggcgattctggaggtctgggaccccccggcccaccgggctca
tatgggcctccaggtatacctggccctccaggaccgtatggttttcctggagtcaaaggt
cttcagggtcagcaagggcctccaggagccattttttctgggtccaagggtcagagcggc
ccacccggtgccacaggtcttccaggcttcccaggtgaacctggtaaccctggcaaagaa
tgctccaatcctattccaggacccaacggagagataggatatgaaggacctccaggaccc
ccaggtcctcctggggagccaggccctacaggaagcagtatttacacccaaggagaccaa
ggcccaattggcctcccggggttaccaggtcgtaagggagacgggggccttccagggccc
cctggacctcagagctacccaggctttacaggaccaaaaggcgcgacaggtcctgctggt
tctcgaggttcccagggacccaaaggtcagatcggggtccctggcccttggggccgcaag
ggagtgaccggcccagttggagagacaggacagaagggccccatagggtttgtgggcctc
cctggtaaaccaggtcctgccggccgtactggtcctgttggagacccgggggatgctggt
cagctgggatttgctggacctcaaggtatcccaggtccacctggtgatccaggtagccga
ggccagggggaggcgtcaccgtcaggcttcctcttgacgatccacagccagtcagttcag
gtgccgcagtgccctgaagggagcagtcggctctgggcgggctacagtctggtctacctg
gagggacaagagaaggcccactctcaagatctgggccaggctggctcctgcctccctgtt
ttctccaccatgccgttctcctactgcaacaaaggtgcctgtcactactcgagccgcaac
gacaaatcctactggctctccaccaccgctcccatacccatgatgcccctatcaggcctg
gagattagctcccacatcagccgctgtgcggtgtgtgagacggtgtcgcctgcagcggct
tttcacagccaggatcacgctgtgcctgcatgcccggccggctggaggagtctgtggacc
ggctactctttcctcatgcacacgggggcaggcgacgagggtggtggccagtctctgact
tcttctgggagctgcctgaaggatttccgcgctcaccccttcatcgagtgccagggtgcg
cgcggctcttgccactactttgccaacctctacagtttttggctcaccgccgtcattcag
acggatcagttcaccactcagaggccggacaccatcaaggcagacgaccagcagtggcgc
aaagccagccagtgtcacgtctgcctccgagaacaatga
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