KEGG   Clinocottus analis (woolly sculpin): 137802250
Entry
137802250         CDS       T10471                                 
Name
(RefSeq) collagen alpha-4(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana04382  Cornified envelope formation
cana04510  Focal adhesion
cana04512  ECM-receptor interaction
cana04518  Integrin signaling
cana04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cana00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    137802250
   04518 Integrin signaling
    137802250
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    137802250
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    137802250
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    137802250
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cana04147]
    137802250
   00536 Glycosaminoglycan binding proteins [BR:cana00536]
    137802250
Exosome [BR:cana04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   137802250
Glycosaminoglycan binding proteins [BR:cana00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   137802250
SSDB
Motif
Pfam: C4 Collagen
Other DBs
NCBI-GeneID: 137802250
NCBI-ProteinID: XP_068456104
LinkDB
Position
Unknown
AA seq 972 aa
MAQEVDQESLVFLVWMVSMGRRDHKDQKDLKENLFMVLRFQGFRGILVEMDSAGYLEDKE
SLGLKASRALLAFMGFRDWKDSKGEQGPPGPQGPEEVIEFPPDFLPPKGNKGEMGPPGQC
GPKGTKGPPGPTGYPGPPGFPGAQGLKGDPGLKGYEGPRGPHEYLVPKVTLVLLEQKGFQ
GLQAPQVLAFQALRGNLDLKVIRDFLAPQEFLDDQALQVKLRNAVLKRLDHPVQKERIPG
VPGRDGPPGAVGLLGPKGLKGDDRETGGIGLPGFNGDPGDPGPSGISLDGSSGLPGFPGL
PGRVLLAHPASLGLRGQGDAVEFLETKGFKVHKANLDDLVGKESQETMALQDLQETLDRG
EYQLDQEVPLVPQEILGPMAGQDRKVRAGTQVGPGPKVYLAALDLQDPEVNKEKEASMGV
QVTLDTQDSLVIKVSQDGLMENLVHLDPKDCRGRMDPVHPEEVQEIQGTLDCGEGQVCLD
NEAWSVIQEDKEEQVMSSRPGVPGFPGDSGGLGPPGPPGSYGPPGIPGPPGPYGFPGVKG
LQGQQGPPGAIFSGSKGQSGPPGATGLPGFPGEPGNPGKECSNPIPGPNGEIGYEGPPGP
PGPPGEPGPTGSSIYTQGDQGPIGLPGLPGRKGDGGLPGPPGPQSYPGFTGPKGATGPAG
SRGSQGPKGQIGVPGPWGRKGVTGPVGETGQKGPIGFVGLPGKPGPAGRTGPVGDPGDAG
QLGFAGPQGIPGPPGDPGSRGQGEASPSGFLLTIHSQSVQVPQCPEGSSRLWAGYSLVYL
EGQEKAHSQDLGQAGSCLPVFSTMPFSYCNKGACHYSSRNDKSYWLSTTAPIPMMPLSGL
EISSHISRCAVCETVSPAAAFHSQDHAVPACPAGWRSLWTGYSFLMHTGAGDEGGGQSLT
SSGSCLKDFRAHPFIECQGARGSCHYFANLYSFWLTAVIQTDQFTTQRPDTIKADDQQWR
KASQCHVCLREQ
NT seq 2919 nt   +upstreamnt  +downstreamnt
atggcacaagaggtcgaccaggagtctttggtattcctggtctggatggtctccatgggc
cgccgggatcacaaggaccaaaaggatttaaaggagaacctttttatggtgcttcgcttc
cagggcttcagggggatcctggtagagatggacagcgcggggtacctggaagacaaggag
tcgttgggcctaaaggccagtcgggccctcctggccttcatgggattcagggattggaag
gactcaaagggggagcaggggccacctggcccacaaggaccagaagaagtcatagaattt
cctccagacttccttccccccaaaggcaacaagggagagatgggtcctcctggacaatgt
ggaccaaagggcacaaaaggcccccctggtccaactggttatccaggaccgccaggattc
cctggagctcaaggacttaaaggagacccagggctgaaaggatacgaggggccaagaggt
ccacatgagtacctggtcccaaaggttaccctggtgttgctggagcaaaagggtttccag
ggcttacaggccccccaggtcctggcgttccaggctctcaggggcaacctggacctaaag
gttatcagggacttcctggcccctcaggaattcctggacgaccaggccctccaggtgaaa
ctgaggaatgctgtcttgaagagattggatcacccggtccaaaaggagaggattccaggt
gtgccgggaagggatggtcctccaggtgctgtgggactgcttggtccaaaaggcctgaaa
ggagatgacagggaaactggtgggattggactgccaggtttcaatggagatccgggcgac
cctggtccgagtggaattagcctggatggctcttcaggacttcctgggttcccaggactt
ccaggccgggtgctcctggcccacccggcttccttggggctcaggggccaaggggacgcc
gtggaattcctggaaaccaagggtttcaaggtgcacaaggccaacctggacgacctggtt
ggaaaggagagccaggagacaatggccttgcaggacctccaggaaaccctggacagaggg
gagtaccagctggaccaagaggtcccgctggtccctcaggagatcttgggaccgatggct
ggtcaggacagaaaggtgagagcgggtacccaggtagggccggggccaaaggtttacctg
gccgccctggacctgcaggacccagaggtaaacaaggagaaagaggcttcgatgggcgtc
caggtgacgctggatacccaggacagcctggtaataaaggtgagccaggacggtcttatg
gagaacctggtccacctggacccaaaggattgccggggaaggatggacccagtgcaccca
gaggaagtccaggagatccaggggaccctggactgcggggaaggtcaggtctgcctggac
aacgaggcgtggtcggtgatccaggaagacaaggaggaacaggtgatgtccagtcgtcca
ggtgttccaggttttccaggcgattctggaggtctgggaccccccggcccaccgggctca
tatgggcctccaggtatacctggccctccaggaccgtatggttttcctggagtcaaaggt
cttcagggtcagcaagggcctccaggagccattttttctgggtccaagggtcagagcggc
ccacccggtgccacaggtcttccaggcttcccaggtgaacctggtaaccctggcaaagaa
tgctccaatcctattccaggacccaacggagagataggatatgaaggacctccaggaccc
ccaggtcctcctggggagccaggccctacaggaagcagtatttacacccaaggagaccaa
ggcccaattggcctcccggggttaccaggtcgtaagggagacgggggccttccagggccc
cctggacctcagagctacccaggctttacaggaccaaaaggcgcgacaggtcctgctggt
tctcgaggttcccagggacccaaaggtcagatcggggtccctggcccttggggccgcaag
ggagtgaccggcccagttggagagacaggacagaagggccccatagggtttgtgggcctc
cctggtaaaccaggtcctgccggccgtactggtcctgttggagacccgggggatgctggt
cagctgggatttgctggacctcaaggtatcccaggtccacctggtgatccaggtagccga
ggccagggggaggcgtcaccgtcaggcttcctcttgacgatccacagccagtcagttcag
gtgccgcagtgccctgaagggagcagtcggctctgggcgggctacagtctggtctacctg
gagggacaagagaaggcccactctcaagatctgggccaggctggctcctgcctccctgtt
ttctccaccatgccgttctcctactgcaacaaaggtgcctgtcactactcgagccgcaac
gacaaatcctactggctctccaccaccgctcccatacccatgatgcccctatcaggcctg
gagattagctcccacatcagccgctgtgcggtgtgtgagacggtgtcgcctgcagcggct
tttcacagccaggatcacgctgtgcctgcatgcccggccggctggaggagtctgtggacc
ggctactctttcctcatgcacacgggggcaggcgacgagggtggtggccagtctctgact
tcttctgggagctgcctgaaggatttccgcgctcaccccttcatcgagtgccagggtgcg
cgcggctcttgccactactttgccaacctctacagtttttggctcaccgccgtcattcag
acggatcagttcaccactcagaggccggacaccatcaaggcagacgaccagcagtggcgc
aaagccagccagtgtcacgtctgcctccgagaacaatga

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