Clinocottus analis (woolly sculpin): 137802544
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Entry
137802544 CDS
T10471
Symbol
chd8
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 8 isoform X1
KO
K04494
chromodomain helicase DNA binding protein 8 [EC:5.6.2.-]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
137802544 (chd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cana03036
]
137802544 (chd8)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
137802544 (chd8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
Chromo
BRK
ResIII
HDA2-3
HTH_Hrp3
Chromo_MIT1
DDRGK
Motif
Other DBs
NCBI-GeneID:
137802544
NCBI-ProteinID:
XP_068456594
LinkDB
All DBs
Position
Unknown
AA seq
2540 aa
AA seq
DB search
MADPIMDLFEDTPLFNLDALPDDSFSQGSSDPVEEALKLALGQVDPPTEPELMVDTDLGL
SVATPTIPEPALVQLSTQQPVPVATAQTVSIAAAPTLVSVTAPVDTLPQIQVQTTIPTSS
TVLLSSPLTVSNSPITTTATTQQQLTQITHQLTAQQLAAITQQAGGKIVILKGPQGQAQV
LQTVSGATGQTGGKVIRVLSGTALKPGMSIMQGGTVLNQASPGQTQVKVSAAGVQRLLQS
PNGPVKQMLLTSMPQTQGQTIQLQIPAQAQMAQGQAQVQVQTQGQVQLQPAMQGGEGKRI
TLVLQQPSQAGSALAAGQTQQQVQIQTTQGGQQQIPARLVLGQLPGGKLVLQGSQLAALT
QARAGQAGGQPKVLTIQLQVQQQPNQQGGIKYQLVSGAGNTGSPQVLQITQGQGGQRVAV
PLKMLLQPQTTSVGGTVSVVKVINTSAAGPSTTTTTSSQAIRITKAPGEPASVRRVEILC
KQEKANRIVAEAIARAKARGEKNLPRVLNQDELPATQTSPELGGTVTVVSTAKKKSSGGS
KKKNPVAGGATPKTTGGADKKGKVKTPGGGTGASGGTVVPGSGNKSKSKTKTNTITLVGA
KKRKRNASSDHSDGELSPASPAALDDDLITKRRSNRVVKRKKYTEDLDIKITDDEDEQED
VDVTTTAAAVASISGGTAAQLKQELELDADGQPSMQFFVENPSEEDAAIVDKILSIRLTK
KEVSQGQYITVEEFFVKYKNYSYLHCEWATLSQLEKDKRIHQKIKRFKTKQAQMRHIFQE
DEEAFNPDYVEVDRILDVSHSVDKDNGEPVIYYLVKWSSLPYEDATWELKEDVDEGKVEE
FSKIQNRQPCLKRTPRPPASSWKKLEETREYKNGNILREYQLEGVNWLLFNWYNRQNCIL
ADEMGLGKTIQSITLLSEEYAAGVQGPFLIIAPLSTITNWEREFSTWTDMNAIVYHGSLA
SRQMIQQYEMYFKDDKEHLIPGAYKFDALITTFEMVLSDCPELREISWRCVIIDEAHRLK
NRNCKLLDSLKMLDVEHKVLLTGTPLQNTVEELFSLLHFLEPAQFPSETEFLKDFGDLKT
EEQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFTFLSL
GVTSNNNVPNLLNTMMELRKCCNHPYLINGAEEKILAELRQVYDPMAPDFHLQALIRSAG
KLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLINKRYLYERIDGRVRGNLRQAAID
RFSKPESDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVK
VYRLITRNSYEREMLDKASLKLGLDRAVLQSMSGNKESNVNGQVQQFSKKEIEDLLRKGA
YAAIMDENDEGNRFCEEDIDQILQRRATTITIESEGKGSTFSKASFVASENRNDIALDDP
EFWQKWAKKADIDMETMNRKNTLVIDTPRVRKQTRQYSTLRGEGGDLSDAESDDEYPPAN
SRQSRSSRRTDRHSGSGYGRTDCFRVEKHLLVYGWGRWKDILSHARCKRRLSERDVETIC
RVILVFCLLHYRGDENIKSFIWELITPPENGREPQTLLNHSGLSIPVPRGRKGKRVKAQS
TFDVQKVEWIRKYNPDTLLLDESYRKHLKHQCNKVLLRVRMLYYLKQEVIGEHAEAVLKG
AVSREVAIWMPEMEQQEVPARWWDTEADRSLLAGVYKHGYEMYTTMRADPCLCFLERAGR
PDDKAIDAEQHTGDAEMGDDPDYDKYSEDPEFKPASRHAKDLFDEPDSMNVDDEISVEDK
VGPVIMESFSSHSGACDWPSSSSLTARLRRLITAYQRSYRQEQLKLEAEAKGDRRRRRCE
QASKLKEIARQERQQRWTRREECDFYRVVSTFGVEKITKDQGLPDAGDAEFDWNRFRTFA
RLDKKTDESLSRYFRSFVAMCRRVCHLRPGRGEDSAELSQTVGPITEERASRTLYRISLL
RRLREKALPHPSLEERLRQAPTSSELPGWWNIPEHDRQLMLGASLHGVSRTELSIYPDPQ
FTFCQAREEFLLNQQAPPPPPEAPPIMLLIQPKTEDEEVPGVKEELSMEDARLLGGEIGA
DMQSTPLSHHDGKARGQGWGLKRSRGRSGKTGERKAEGGSDSDSDSDSGSSSSGRSGSSD
DSGESEEEVERAGMKLCDVDEENSLLSMTPSQDGILPPDPLRVDWPKDRVLINRLDSLCT
LMLTGQWPSGRRYMPETQLNPSLELAGDEMAYTRVVRKPSGAPGGPGEDGEDGEFTVKLL
KEEGLKLTFSKQALMPNGSGGESSGRKRRKDQELSDPDGLIDPLERTPRRRDPPTWLKEN
PDYEVEGDMLELLVNRSKRKRRRRADKALTGSEKVKVINMRTGKKVGNAFCPMLQDLKEY
LEENPDNAVAPDWSETVRKSGFLPATFFHRLLTEHSEIPKKSRRRHHHHHHHHQVPEPIP
EDPNLEGVEEETLVSDGAYMMDEEDLETSHHFLTGPDFDVKMEGGDSLSQGDYDSSDQEA
LLDDVIIAQKDSDSSSSSED
NT seq
7623 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccatcatggacctctttgaggacacacccctgttcaaccttgatgcccta
ccagacgactccttctctcagggctcctcggaccccgtggaggaggcccttaagctggcg
ttgggccaagtggacccaccaaccgagcctgagctcatggtcgacacagacctgggtctt
tctgtagcaactcccaccatcccggagcctgcactcgttcagctgtccacacagcagccg
gtaccggtggcgaccgctcagactgtttctatagctgcggctcctactttagtctcggtt
actgcaccagttgatactttacctcaaatccaggtccagaccactatacccaccagtagc
actgtgctgctgagctcacctctgacagtttccaactccccaatcaccaccaccgccacc
acacagcagcagctcacacagataacccatcagctcactgcacagcagctagctgccatc
acacaacaggccgggggcaaaattgtcatcctcaaaggtcctcagggtcaagcccaggtg
ctgcagactgtgtcgggagccacaggccagacgggtggaaaggtcatccgtgtgttgtct
ggcactgctcttaagcctggcatgtccataatgcaggggggcacagtcttgaatcaggcc
agcccgggacaaactcaagtcaaggtgagtgctgctggggttcagaggctgctgcagtct
cccaacgggccagtgaaacagatgcttctgacctctatgccccagacacaaggccagacc
attcagttgcagattcctgcccaggcacagatggctcaaggccaggctcaagtccaagtc
cagacccaaggtcaggtgcaactccagccagccatgcagggtggcgaaggaaagcggatc
accctggtgctccagcagccttcccaggctggctctgctctggcagcaggtcaaacccag
caacaggtgcagattcagacaacccaagggggacagcagcagatcccagctagactggtg
ctggggcaactcccgggaggcaaactggttctccagggaagtcagctagcagccctgacc
caggctcgggcaggccaggcaggagggcagcccaaagtcctcacaattcagctgcaggtg
cagcagcagcccaaccaacaaggaggaattaagtaccagctggtctcaggagctggcaat
actggcagcccacaggtgttacagatcacgcagggacaaggagggcagagagttgcggtg
ccacttaaaatgcttctgcagccacagacaacctcagtcggcggcacggtctctgtggtg
aaggtcatcaacacgtcggccgcaggcccctccactacaaccacaacttcgtcccaggcc
atccgcatcaccaaagcccctggcgagcctgcatctgtgagacgagtggagatcctctgc
aagcaggagaaagcaaaccgtattgtggccgaagcaatagcccgtgccaaggcgcgtggc
gaaaagaacctgcccagagtgctgaaccaggacgagcttccagccacgcagacttcccca
gaattggggggcaccgtgactgtggtttctactgctaagaaaaagtctagcgggggaagc
aagaagaaaaaccccgtagctggaggagcaactcccaaaacaacaggtggggccgacaaa
aagggcaaagtgaagacgccaggaggaggaaccggagcgtctggaggcacagtcgtaccc
gggtctgggaacaagagcaaaagcaagactaagacaaacactattactctagtgggagca
aagaaaaggaagcgcaatgcgtcttcagaccactctgatggggagttaagccctgcctca
cccgctgctctagatgacgacttaattacgaagaggcgctccaatcgcgtggtgaagagg
aagaagtacacagaggacctggatatcaagataactgatgatgaggacgagcaggaagat
gttgacgttactacaactgcggcggctgtggcctccatcagtggtgggacagcagcgcag
ctgaaacaggaactggagctggatgctgacggacagcccagcatgcagttctttgtggaa
aacccaagtgaggaagatgctgccattgtcgacaaaattctgtctataaggttgactaag
aaggaagtgtcccaaggccagtacatcactgttgaggaattctttgtgaaatacaagaac
tattcatacttgcactgcgagtgggccaccttgagtcagctggagaaagataagaggatc
catcaaaagatcaagaggttcaagaccaagcaagcacagatgaggcatatcttccaggag
gatgaggaggcttttaacccagactatgtagaggtggaccgaatcttggacgtgtcccac
agtgtggacaaggacaacggcgagcctgttatctactacttggtgaagtggtcctctctg
ccttatgaggacgccacctgggagctgaaggaggacgtggacgagggcaaggttgaggaa
tttagcaaaatccaaaaccgacaaccttgcctaaagagaacgccacgaccgccagccagt
tcatggaagaagttggaggagactagagagtacaagaatggcaacatactccgagagtac
cagcttgaaggagtcaactggctcctcttcaactggtacaacaggcagaactgtatcctg
gcagatgagatgggtttggggaagaccatccagtccatcacgctgctgtcagaggagtac
gctgctggcgtccaaggccccttcctgatcatcgcgcccctctccaccatcaccaactgg
gagagggagttcagcacatggaccgacatgaacgccatcgtgtaccacggcagcctggcg
agccgacagatgatccagcagtatgagatgtacttcaaggacgacaaggagcacttgatc
ccaggtgcgtacaagtttgatgctctcatcacaacatttgagatggtgttatccgactgc
ccggagctaagggagatctcctggcgctgtgtgatcattgatgaggcccaccgccttaag
aatcgcaactgcaagctgttggacagcttgaagatgctggatgtggaacacaaggtgttg
ttgaccggcactcctctccagaacactgtggaggaactattcagcctgcttcatttcctg
gagcctgctcagttcccttctgagactgaattcctcaaagactttggagacctcaaaaca
gaggaacaggttcaaaagctgcaggccatcttgaagccaatgatgcttcgaaggctcaaa
gaggatgttgagaagaacttggcacctaaacaggagaccatcattgaggttgagttgacg
gatgtccagaagaagtactaccgggccatcctggaaaggaacttcactttcctcagttta
ggggtaaccagtaacaacaatgtccccaacctgctcaacactatgatggagctacgcaag
tgctgcaaccacccctacctcatcaatggcgcggaggagaagatcttagctgagctgcga
caggtctatgaccccatggcgccagacttccatttgcaggccctgattcggtcggctggc
aagctggtgctactggacaagttgctgcctcgcctcaaggctggcggccacaaagtgctc
atcttctcccagatggtgcgctgcttagacattctggaggactacctcatcaacaagaga
tacctttatgagcgaattgatggcagagtgcgtgggaacttacgacaagccgccatcgac
cgcttcagcaagcctgaatcggaccgctttgtcttcctgctgtgtacccgtgctggcggc
ctgggaattaacctcactgctgctgacacctgtgttatatttgactctgactggaaccct
caaaatgacctgcaggctcaggcacggtgtcatcgtatcggtcagtctaaggcggtcaag
gtgtaccgtctgatcactaggaactcctacgagagggagatgctggataaagctagcctg
aagcttggcctggaccgggccgtcctgcagagtatgagtggcaacaaagaaagcaatgtc
aacgggcaagtacagcagttctccaagaaggagattgaggacctgctgaggaagggagcc
tacgctgccatcatggacgaaaacgatgaaggcaatcgcttctgcgaggaggacatcgac
cagatcctgcagcgaagagccaccaccatcaccatcgagagcgagggcaagggctccacg
ttctccaaggccagcttcgtagcctctgagaaccgcaatgacattgcccttgatgaccct
gaattctggcaaaaatgggccaagaaggccgacatagacatggaaaccatgaaccgaaag
aacacccttgtgatcgacactcccagagtacgcaagcagacccgccagtactccacttta
cgaggtgaaggtggagacctgtctgatgctgaaagcgacgatgagtatccaccggccaat
tccagacagtcgcgttcctcgcggcgcaccgaccgccacagtggaagtggttatggccgc
actgactgtttccgggtggagaaacacctgctcgtctatggttggggtcgctggaaggac
atcttatcccatgccagatgtaagcgtcgcctgagtgagcgggacgtggagacgatctgc
cgagtcatcctggtcttttgtctgctccactatcgtggagatgagaacatcaagagtttc
atctgggagctcatcacaccgccagagaacggccgcgaaccacaaacactacttaaccac
tctggcctgtctatcccggtcccaagaggcagaaagggcaagagagtaaaagcccagagc
acgtttgacgtccagaaggtggagtggatacgcaagtacaaccctgacactctgcttctg
gacgagagctaccgaaaacacctcaaacaccagtgcaacaaggtgttgctgagggtgcgc
atgctctactatctgaaacaggaggtgatcggagaacatgcagaagctgtgctgaaaggg
gctgtcagcagggaggttgcaatctggatgcctgagatggagcagcaggaagttcctgca
agatggtgggatactgaagcagaccgctcattgcttgctggcgtatataaacatggttat
gagatgtacaccacgatgcgtgctgatccctgcctctgcttcctggagagggctggtcgg
cctgatgacaaggccattgatgccgagcagcacacgggtgatgccgagatgggagatgat
cctgattatgataagtactcggaggacccggagttcaagcctgcatcaagacacgccaaa
gatctttttgatgagcctgattccatgaatgtcgacgatgagatttccgtggaagacaag
gtggggccagtgataatggaaagcttttccagccacagcggtgcgtgcgactggccctca
agctcatcgctcacggcgcggttgcggcgactgatcacagcttaccaacgcagctacagg
caggagcagctgaagctcgaagcagaggcgaagggcgaccgcaggcgcaggcggtgcgaa
caggccagcaagctgaaggagatcgcacgacaggagcgccagcagaggtggacacggagg
gaggaatgcgacttctaccgtgtggtttcgacttttggtgtggaaaagatcacaaaggat
caaggtcttccagatgcaggagatgctgagttcgactggaaccgcttccggacttttgct
cgtctagataaaaaaacagatgagagcctcagtcgatacttccgctctttcgttgccatg
tgtcggagagtttgccacttgcgaccaggccgcggtgaagattcagcagagctttcccag
actgtcggccccatcactgaggagcgtgcttcccgaaccctttaccgcattagcctcctg
cgtcgcctccgtgagaaagcgctgccccacccgtccctggaggagcgtctgcgtcaagca
ccgaccagctccgagctgcccggttggtggaatattccggaacacgatcgtcagctgatg
ctgggcgcctcactgcatggtgtcagccgcactgagctctccatctacccagacccacag
ttcaccttctgtcaggctcgggaagagttcctcctgaaccagcaggccccgccgcctcca
ccggaagcaccgcccattatgctcctcatccagccgaagactgaggatgaggaggtgcct
ggagtaaaggaagagttgtctatggaggacgcccggttgcttggtggtgaaatcggtgcc
gacatgcaaagcacgcccctgagtcaccacgacggcaaagcacgagggcagggctggggc
ctgaagcggagcaggggaaggagcgggaaaacgggagagaggaaggcagagggagggtcc
gactctgactctgactccgactccggctcgtcgtcatccgggcgatcaggcagcagtgac
gacagcggagagagtgaggaagaagtggaaagagcgggcatgaagctgtgtgacgtggat
gaagaaaatagcttactctccatgactccatctcaggatggcattcttcctcctgatcct
ctcagagtggattggcccaaggaccgcgtgttaatcaaccgtctcgacagtttgtgcacg
ctgatgctgacgggtcagtggccctcagggcggcgctacatgcccgagactcagctcaac
ccgagcttggagctggcaggagacgagatggcctacacgagggtggtccgtaaaccaagc
ggcgcgcctggtggccccggggaggatggagaagatggagagtttactgtcaagctcctt
aaggaggaggggctgaagctgaccttctcgaagcaggccttgatgcccaatgggtcggga
ggagagagcagtggccgcaagagacgcaaggaccaggagttatcagacccagatggactg
attgatccactggagcgtactcctcggcgcagggaccctcccacttggttaaaggagaac
ccagattatgaggtggagggagacatgctggagcttcttgtgaacaggagcaagaggaag
aggaggaggagggcagataaagccctgacaggcagcgagaaggtcaaagtcattaacatg
aggacaggaaagaaggtcggaaatgccttttgtccgatgctgcaagacctgaaggaatat
ctggaggagaatcctgataatgcagtagcacctgactggtccgaaacagttcggaaatct
ggcttcctccccgcgaccttcttccaccggctgctgaccgagcactctgagatcccgaag
aaaagccggcgccgccaccaccatcaccaccaccatcaccaagttccagagcccatcccc
gaagaccccaaccttgaaggagtggaggaggagactctggtgtcggacggagcctacatg
atggacgaggaggacctagagacctcccatcacttcctcaccggtccggactttgacgtg
aaaatggagggcggcgacagcctttcccaaggtgactatgacagctcggatcaggaggcg
ctattggacgatgtcatcatagcacagaaggactctgactcctcatcaagctcagaggat
tga
DBGET
integrated database retrieval system
