Clinocottus analis (woolly sculpin): 137802592
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Entry
137802592 CDS
T10471
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137802592 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cana03019
]
137802592 (exosc8)
Messenger RNA biogenesis [BR:
cana03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
137802592 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
NYN_YacP
Motif
Other DBs
NCBI-GeneID:
137802592
NCBI-ProteinID:
XP_068456677
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MAAGFKVAEPLEYHRSFLKENCRPDGRELSEFRTTTLNIGSISTADGSALVKVGNTTVMC
GIKAELTNPTVEAPGKGYIVPNVDLPPLCSSQFRPGPPGEQAQVASQFLADVIESSEVIQ
TEDLCIERGKLCWVLYCDMMCLDYDGNVLDACIIALLAALKNTQLPEVTINTETSSPEVN
FEKKRGLQIHKHPVGASFSVFDDSILIVDPTAEEESLSTSRLTVVTDDDERLCIVHKPGG
TPLSAEKLQECINRATARQREIQKLIDKVIHSVKTAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaaagttgctgagcctctggagtaccacaggagctttctgaaagaa
aactgtcgtccggatggccgggaactgtcggagttcagaaccacaacactgaatataggg
tccatatccacagcagatggctcagccctggtgaaggttggaaacaccacagtcatgtgt
ggcatcaaagcggagctgacaaacccaacagtggaagcaccaggtaaaggttatatagtg
cccaatgtggacctgccgccgctctgttcctctcagtttcggcccggtccgccaggagag
caggcacaggtggccagccagttcctcgctgatgtaatagaaagctctgaggtgatacaa
acagaggacttgtgcattgaacgaggaaagctctgctgggtgctctactgtgacatgatg
tgtctcgactacgatgggaatgtgttggacgcttgcatcatcgccctgctggctgccctg
aagaacacacagctcccagaggtcaccatcaacacagagactagttcaccggaggtgaat
tttgaaaagaagcgtgggctgcaaattcataaacatccagtcggggcctcttttagtgtc
tttgacgattccatactgattgtagaccccacagctgaggaggagagtctgtcgacctct
cgcctcactgtggtgacggatgatgacgagcgactctgcattgtacacaaaccaggtggg
acgccactgtcggcagagaagcttcaggagtgcatcaacagagcgacagcgagacagaga
gagatccagaaactcattgataaagtcattcacagtgtgaagacggcacaataa
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